RNA–Protein interactions for RNA: ENST00000515064.5

LDB2-216, Transcript of LIM domain binding 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene LDB2, Length 2,295 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-216ENST00000515064 NPM2Q86SE8 214 aaKnown RBP9.65□□□□□ -0.87
LDB2-216ENST00000515064 ADCY10Q96PN6 1610 aa9.64□□□□□ -0.87
LDB2-216ENST00000515064 TSPOAP1O95153 1857 aa9.63□□□□□ -0.87
LDB2-216ENST00000515064 GOLGA3Q08378 1498 aa9.62□□□□□ -0.87
LDB2-216ENST00000515064 NPM1P06748 294 aaKnown RBP eCLIP9.62□□□□□ -0.87
LDB2-216ENST00000515064 FRAT1Q92837 279 aaPredicted RBP9.62□□□□□ -0.87
LDB2-216ENST00000515064 HSP90AA1P07900 732 aaKnown RBP9.61□□□□□ -0.87
LDB2-216ENST00000515064 RBM10P98175 930 aaKnown RBP9.61□□□□□ -0.87
LDB2-216ENST00000515064 PDE4CQ08493 712 aa9.61□□□□□ -0.87
LDB2-216ENST00000515064 ABCC10Q5T3U5 1492 aa9.61□□□□□ -0.87
LDB2-216ENST00000515064 KIF27Q86VH2 1401 aa9.6□□□□□ -0.87
LDB2-216ENST00000515064 VPS8Q8N3P4 1428 aa9.6□□□□□ -0.87
LDB2-216ENST00000515064 FGD1P98174 961 aa9.6□□□□□ -0.87
LDB2-216ENST00000515064 AAMPQ13685 434 aa9.59□□□□□ -0.87
LDB2-216ENST00000515064 KIAA0586Q9BVV6 1533 aa9.59□□□□□ -0.87
LDB2-216ENST00000515064 DIP2BQ9P265 1576 aa9.59□□□□□ -0.87
LDB2-216ENST00000515064 NAP1L5Q96NT1 182 aaPredicted RBP9.58□□□□□ -0.88
LDB2-216ENST00000515064 CARMIL1Q5VZK9 1371 aa9.58□□□□□ -0.88
LDB2-216ENST00000515064 CLIP1P30622 1438 aa9.57□□□□□ -0.88
LDB2-216ENST00000515064 MAPKBP1O60336 1514 aa9.56□□□□□ -0.88
LDB2-216ENST00000515064 PTPRGP23470 1445 aa9.56□□□□□ -0.88
LDB2-216ENST00000515064 NFKBIBQ15653 356 aa9.56□□□□□ -0.88
LDB2-216ENST00000515064 DDRGK1Q96HY6 314 aa9.56□□□□□ -0.88
LDB2-216ENST00000515064 KDM4FA0A1W2PPD8 638 aa9.56□□□□□ -0.88
LDB2-216ENST00000515064 HIRIP3Q9BW71 556 aaPredicted RBP9.55□□□□□ -0.88
LDB2-216ENST00000515064 CUL7Q14999 1698 aa9.55□□□□□ -0.88
LDB2-216ENST00000515064 KDM6BO15054 1643 aa9.53□□□□□ -0.88
LDB2-216ENST00000515064 SIN3AQ96ST3 1273 aa9.53□□□□□ -0.88
LDB2-216ENST00000515064 PNNQ9H307 717 aaKnown RBP9.53□□□□□ -0.88
LDB2-216ENST00000515064 DCAF11Q8TEB1 546 aa9.52□□□□□ -0.89
LDB2-216ENST00000515064 PDIA4P13667 645 aaKnown RBP9.52□□□□□ -0.89
LDB2-216ENST00000515064 RRAGDQ9NQL2 400 aaPredicted RBP9.52□□□□□ -0.89
LDB2-216ENST00000515064 ZBED9Q6R2W3 1325 aa9.51□□□□□ -0.89
LDB2-216ENST00000515064 ASXL2Q76L83 1435 aa9.51□□□□□ -0.89
LDB2-216ENST00000515064 IQGAP2Q13576 1575 aa9.51□□□□□ -0.89
LDB2-216ENST00000515064 TCERG1O14776 1098 aaKnown RBP9.51□□□□□ -0.89
LDB2-216ENST00000515064 ABCC2Q92887 1545 aa9.5□□□□□ -0.89
LDB2-216ENST00000515064 DISP1Q96F81 1524 aa9.5□□□□□ -0.89
LDB2-216ENST00000515064 ARID3CA6NKF2 412 aa9.49□□□□□ -0.89
LDB2-216ENST00000515064 PDE4AP27815 886 aa9.49□□□□□ -0.89
LDB2-216ENST00000515064 CARMIL2Q6F5E8 1435 aa9.49□□□□□ -0.89
LDB2-216ENST00000515064 COL17A1Q9UMD9 1497 aaPredicted RBP9.49□□□□□ -0.89
LDB2-216ENST00000515064 PPRC1Q5VV67 1664 aaKnown RBP9.47□□□□□ -0.89
LDB2-216ENST00000515064 CALD1Q05682 793 aaKnown RBP9.47□□□□□ -0.89
LDB2-216ENST00000515064 RAB3GAP2Q9H2M9 1393 aa9.47□□□□□ -0.89
LDB2-216ENST00000515064 UACAQ9BZF9 1416 aa9.47□□□□□ -0.89
LDB2-216ENST00000515064 RRBP1Q9P2E9 1410 aaKnown RBP9.47□□□□□ -0.89
LDB2-216ENST00000515064 L1TD1Q5T7N2 865 aaKnown RBP9.46□□□□□ -0.9
LDB2-216ENST00000515064 FAM9BQ8IZU0 186 aa9.46□□□□□ -0.9
LDB2-216ENST00000515064 BACH2Q9BYV9 841 aa9.46□□□□□ -0.9
LDB2-216ENST00000515064 BCL11BQ9C0K0 894 aaPredicted RBP9.46□□□□□ -0.9
LDB2-216ENST00000515064 MS4A1P11836 297 aa9.45□□□□□ -0.9
LDB2-216ENST00000515064 PLB1Q6P1J6 1458 aa9.45□□□□□ -0.9
LDB2-216ENST00000515064 RAPGEF2Q9Y4G8 1499 aa9.45□□□□□ -0.9
LDB2-216ENST00000515064 P3H3Q8IVL6 736 aa9.44□□□□□ -0.9
LDB2-216ENST00000515064 CCNB3Q8WWL7 1395 aa9.44□□□□□ -0.9
LDB2-216ENST00000515064 AKNAQ7Z591 1439 aa9.44□□□□□ -0.9
LDB2-216ENST00000515064 CLCN1P35523 988 aa9.43□□□□□ -0.9
LDB2-216ENST00000515064 SMG6Q86US8 1419 aaKnown RBP9.43□□□□□ -0.9
LDB2-216ENST00000515064 CENPJQ9HC77 1338 aaPredicted RBP9.43□□□□□ -0.9
LDB2-216ENST00000515064 KIAA0556O60303 1618 aa9.43□□□□□ -0.9
LDB2-216ENST00000515064 ZCCHC11Q5TAX3 1644 aaKnown RBP9.43□□□□□ -0.9
LDB2-216ENST00000515064 EPRSP07814 1512 aaKnown RBP9.43□□□□□ -0.9
LDB2-216ENST00000515064 PDCL3Q9H2J4 239 aa9.43□□□□□ -0.9
LDB2-216ENST00000515064 FRAT2O75474 233 aaPredicted RBP9.42□□□□□ -0.9
LDB2-216ENST00000515064 RANGAP1P46060 587 aaPredicted RBP9.42□□□□□ -0.9
LDB2-216ENST00000515064 KDM5BQ9UGL1 1544 aa9.42□□□□□ -0.9
LDB2-216ENST00000515064 MRS2Q9HD23 443 aa9.42□□□□□ -0.9
LDB2-216ENST00000515064 PRDM4Q9UKN5 801 aa9.42□□□□□ -0.9
LDB2-216ENST00000515064 KIF21BO75037 1637 aa9.41□□□□□ -0.9
LDB2-216ENST00000515064 UGGT2Q9NYU1 1516 aa9.41□□□□□ -0.9
LDB2-216ENST00000515064 ADGRL1O94910 1474 aa9.41□□□□□ -0.9
LDB2-216ENST00000515064 RNF123Q5XPI4 1314 aa9.41□□□□□ -0.9
LDB2-216ENST00000515064 NUDCQ9Y266 331 aa9.41□□□□□ -0.9
LDB2-216ENST00000515064 UHRF1BP1LA0JNW5 1464 aa9.41□□□□□ -0.9
LDB2-216ENST00000515064 RGS3P49796 1198 aa9.4□□□□□ -0.9
LDB2-216ENST00000515064 SLC4A3P48751 1232 aa9.39□□□□□ -0.91
LDB2-216ENST00000515064 GLI2P10070 1586 aa9.39□□□□□ -0.91
LDB2-216ENST00000515064 MAP3K4Q9Y6R4 1608 aa9.39□□□□□ -0.91
LDB2-216ENST00000515064 TPM2P07951 284 aa9.39□□□□□ -0.91
LDB2-216ENST00000515064 SETD5Q9C0A6 1442 aa9.38□□□□□ -0.91
LDB2-216ENST00000515064 TAF7LQ5H9L4 462 aa9.38□□□□□ -0.91
LDB2-216ENST00000515064 KANK4Q5T7N3 995 aaPredicted RBP9.38□□□□□ -0.91
LDB2-216ENST00000515064 WDR7Q9Y4E6 1490 aa9.38□□□□□ -0.91
LDB2-216ENST00000515064 CCDC184Q52MB2 194 aa9.38□□□□□ -0.91
LDB2-216ENST00000515064 ILDR1Q86SU0 546 aaPredicted RBP9.38□□□□□ -0.91
LDB2-216ENST00000515064 TONSLQ96HA7 1378 aa9.38□□□□□ -0.91
LDB2-216ENST00000515064 CTTNBP2Q8WZ74 1663 aa9.37□□□□□ -0.91
LDB2-216ENST00000515064 ARID4BQ4LE39 1312 aaPredicted RBP9.37□□□□□ -0.91
LDB2-216ENST00000515064 POGKQ9P215 609 aa9.35□□□□□ -0.91
LDB2-216ENST00000515064 CD109Q6YHK3 1445 aa9.35□□□□□ -0.91
LDB2-216ENST00000515064 BBXQ8WY36 941 aaPredicted RBP9.34□□□□□ -0.91
LDB2-216ENST00000515064 PRXQ9BXM0 1461 aa9.34□□□□□ -0.91
LDB2-216ENST00000515064 PRKRIP1Q9H875 184 aaPredicted RBP9.34□□□□□ -0.91
LDB2-216ENST00000515064 CNTLNQ9NXG0 1405 aa9.34□□□□□ -0.91
LDB2-216ENST00000515064 ABCA8O94911 1581 aa9.33□□□□□ -0.92
LDB2-216ENST00000515064 TEX14Q8IWB6 1497 aa9.33□□□□□ -0.92
LDB2-216ENST00000515064 GOLGA6L3A6NEY3 463 aa9.33□□□□□ -0.92
LDB2-216ENST00000515064 ARXQ96QS3 562 aa9.33□□□□□ -0.92
LDB2-216ENST00000515064 NAP1L2Q9ULW6 460 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms