RNA–Protein interactions for RNA: ENST00000514967.5

PROM1-218, Transcript of prominin 1, humanhuman

TSL 5

Gene PROM1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-218ENST00000514967 ITSN2Q9NZM3 1697 aa25.15■■□□□ 1.62
PROM1-218ENST00000514967 MIA2Q96PC5 1412 aa25.14■■□□□ 1.62
PROM1-218ENST00000514967 CDC42BPBQ9Y5S2 1711 aa25.14■■□□□ 1.61
PROM1-218ENST00000514967 FANCAO15360 1455 aa25.14■■□□□ 1.61
PROM1-218ENST00000514967 MYOM3Q5VTT5 1437 aa25.12■■□□□ 1.61
PROM1-218ENST00000514967 TSPOAP1O95153 1857 aa25.11■■□□□ 1.61
PROM1-218ENST00000514967 CFDP1Q9UEE9 299 aaPredicted RBP25.1■■□□□ 1.61
PROM1-218ENST00000514967 ARHGAP5Q13017 1502 aa25.09■■□□□ 1.61
PROM1-218ENST00000514967 AKNAQ7Z591 1439 aa25.09■■□□□ 1.61
PROM1-218ENST00000514967 KIAA1107Q9UPP5 1409 aa25.07■■□□□ 1.6
PROM1-218ENST00000514967 PLEKHH2Q8IVE3 1493 aa25.07■■□□□ 1.6
PROM1-218ENST00000514967 FGD6Q6ZV73 1430 aa25.01■■□□□ 1.59
PROM1-218ENST00000514967 ADGRL1O94910 1474 aa25■■□□□ 1.59
PROM1-218ENST00000514967 ABCC1P33527 1531 aa24.99■■□□□ 1.59
PROM1-218ENST00000514967 TCOF1Q13428 1488 aaKnown RBP24.99■■□□□ 1.59
PROM1-218ENST00000514967 RSPH4AQ5TD94 716 aa24.99■■□□□ 1.59
PROM1-218ENST00000514967 SAMD9LQ8IVG5 1584 aa24.99■■□□□ 1.59
PROM1-218ENST00000514967 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.98■■□□□ 1.59
PROM1-218ENST00000514967 DENND4BO75064 1496 aaPredicted RBP24.97■■□□□ 1.59
PROM1-218ENST00000514967 SCAPERQ9BY12 1400 aa24.97■■□□□ 1.59
PROM1-218ENST00000514967 COL17A1Q9UMD9 1497 aaPredicted RBP24.96■■□□□ 1.59
PROM1-218ENST00000514967 CAMSAP2Q08AD1 1489 aa24.95■■□□□ 1.58
PROM1-218ENST00000514967 MBD5Q9P267 1494 aa24.94■■□□□ 1.58
PROM1-218ENST00000514967 KDM6BO15054 1643 aa24.94■■□□□ 1.58
PROM1-218ENST00000514967 ZNF518AQ6AHZ1 1483 aa24.93■■□□□ 1.58
PROM1-218ENST00000514967 POGZQ7Z3K3 1410 aa24.93■■□□□ 1.58
PROM1-218ENST00000514967 RRBP1Q9P2E9 1410 aaKnown RBP24.93■■□□□ 1.58
PROM1-218ENST00000514967 PTPN23Q9H3S7 1636 aa24.92■■□□□ 1.58
PROM1-218ENST00000514967 ARHGEF5Q12774 1597 aa24.92■■□□□ 1.58
PROM1-218ENST00000514967 ARHGEF12Q9NZN5 1544 aa24.91■■□□□ 1.58
PROM1-218ENST00000514967 ZNF777Q9ULD5 760 aaPredicted RBP24.91■■□□□ 1.58
PROM1-218ENST00000514967 ZNF644Q9H582 1327 aaPredicted RBP24.9■■□□□ 1.58
PROM1-218ENST00000514967 PPARGC1BQ86YN6 1023 aaKnown RBP24.9■■□□□ 1.58
PROM1-218ENST00000514967 RICTORQ6R327 1708 aa24.89■■□□□ 1.57
PROM1-218ENST00000514967 KDM5CP41229 1560 aa24.88■■□□□ 1.57
PROM1-218ENST00000514967 ZMYM4Q5VZL5 1548 aa24.88■■□□□ 1.57
PROM1-218ENST00000514967 SYCP2Q9BX26 1530 aa24.88■■□□□ 1.57
PROM1-218ENST00000514967 MAGI2Q86UL8 1455 aa24.88■■□□□ 1.57
PROM1-218ENST00000514967 FRMPD1Q5SYB0 1578 aa24.86■■□□□ 1.57
PROM1-218ENST00000514967 TRAPPC8Q9Y2L5 1435 aa24.86■■□□□ 1.57
PROM1-218ENST00000514967 CCDC141Q6ZP82 1450 aa24.84■■□□□ 1.57
PROM1-218ENST00000514967 MLH3Q9UHC1 1453 aa24.84■■□□□ 1.57
PROM1-218ENST00000514967 HNRNPMP52272 730 aaKnown RBP eCLIP24.84■■□□□ 1.57
PROM1-218ENST00000514967 RAPGEF3O95398 923 aa24.83■■□□□ 1.57
PROM1-218ENST00000514967 RTEL1-TNFRSF6BF6WH68 1400 aa24.83■■□□□ 1.57
PROM1-218ENST00000514967 AFAP1Q8N556 730 aa24.81■■□□□ 1.56
PROM1-218ENST00000514967 DNMT1P26358 1616 aaKnown RBP24.79■■□□□ 1.56
PROM1-218ENST00000514967 SHANK2Q9UPX8 1470 aa24.79■■□□□ 1.56
PROM1-218ENST00000514967 MAST1Q9Y2H9 1570 aa24.78■■□□□ 1.56
PROM1-218ENST00000514967 ABCC5O15440 1437 aa24.77■■□□□ 1.56
PROM1-218ENST00000514967 TSPY4P0CV99 314 aa24.76■■□□□ 1.55
PROM1-218ENST00000514967 TSPY10P0CW01 314 aa24.76■■□□□ 1.55
PROM1-218ENST00000514967 DAPK1P53355 1430 aa24.76■■□□□ 1.55
PROM1-218ENST00000514967 HECW2Q9P2P5 1572 aa24.76■■□□□ 1.55
PROM1-218ENST00000514967 SPAG9O60271 1321 aaKnown RBP24.75■■□□□ 1.55
PROM1-218ENST00000514967 FAM50AQ14320 339 aaKnown RBP24.74■■□□□ 1.55
PROM1-218ENST00000514967 INO80Q9ULG1 1556 aaPredicted RBP24.73■■□□□ 1.55
PROM1-218ENST00000514967 CROCC2H7BZ55 1655 aa24.71■■□□□ 1.55
PROM1-218ENST00000514967 ATP7AQ04656 1500 aa24.71■■□□□ 1.55
PROM1-218ENST00000514967 ZFYVE16Q7Z3T8 1539 aa24.71■■□□□ 1.55
PROM1-218ENST00000514967 KIDINS220Q9ULH0 1771 aa24.7■■□□□ 1.55
PROM1-218ENST00000514967 ARHGEF40Q8TER5 1519 aa24.69■■□□□ 1.54
PROM1-218ENST00000514967 C9orf84Q5VXU9 1444 aa24.69■■□□□ 1.54
PROM1-218ENST00000514967 ADGRL2O95490 1459 aa24.68■■□□□ 1.54
PROM1-218ENST00000514967 REREQ9P2R6 1566 aa24.67■■□□□ 1.54
PROM1-218ENST00000514967 ROCK1Q13464 1354 aa24.67■■□□□ 1.54
PROM1-218ENST00000514967 ATP10AO60312 1499 aa24.66■■□□□ 1.54
PROM1-218ENST00000514967 PLXNC1O60486 1568 aa24.66■■□□□ 1.54
PROM1-218ENST00000514967 YEATS2Q9ULM3 1422 aa24.64■■□□□ 1.54
PROM1-218ENST00000514967 DIP2CQ9Y2E4 1556 aa24.63■■□□□ 1.53
PROM1-218ENST00000514967 PTPRKQ15262 1439 aa24.62■■□□□ 1.53
PROM1-218ENST00000514967 NCOA1Q15788 1441 aa24.62■■□□□ 1.53
PROM1-218ENST00000514967 ANKRD30AQ9BXX3 1397 aa24.62■■□□□ 1.53
PROM1-218ENST00000514967 ABCA6Q8N139 1617 aa24.61■■□□□ 1.53
PROM1-218ENST00000514967 ADGBQ8N7X0 1667 aa24.59■■□□□ 1.53
PROM1-218ENST00000514967 DHX29Q7Z478 1369 aaKnown RBP24.58■■□□□ 1.53
PROM1-218ENST00000514967 AGLP35573 1532 aa24.58■■□□□ 1.53
PROM1-218ENST00000514967 A2MP01023 1474 aa24.57■■□□□ 1.52
PROM1-218ENST00000514967 MYT1LQ9UL68 1186 aa24.56■■□□□ 1.52
PROM1-218ENST00000514967 DUOX2Q9NRD8 1548 aa24.56■■□□□ 1.52
PROM1-218ENST00000514967 KIF15Q9NS87 1388 aa24.54■■□□□ 1.52
PROM1-218ENST00000514967 ERBINQ96RT1 1412 aa24.52■■□□□ 1.52
PROM1-218ENST00000514967 CHIC2Q9UKJ5 165 aa24.51■■□□□ 1.51
PROM1-218ENST00000514967 BCORL1Q5H9F3 1711 aa24.51■■□□□ 1.51
PROM1-218ENST00000514967 HFM1A2PYH4 1435 aa24.48■■□□□ 1.51
PROM1-218ENST00000514967 TRIM26Q12899 539 aaPredicted RBP24.48■■□□□ 1.51
PROM1-218ENST00000514967 EIF2AK4Q9P2K8 1649 aaKnown RBP24.48■■□□□ 1.51
PROM1-218ENST00000514967 RRP7BPQ9NSQ0 103 aa24.47■■□□□ 1.51
PROM1-218ENST00000514967 ITGAEP38570 1179 aa24.46■■□□□ 1.51
PROM1-218ENST00000514967 PPP6R1Q9UPN7 881 aa24.46■■□□□ 1.51
PROM1-218ENST00000514967 ANKRD50Q9ULJ7 1429 aa24.44■■□□□ 1.5
PROM1-218ENST00000514967 ACIN1Q9UKV3 1341 aaKnown RBP24.44■■□□□ 1.5
PROM1-218ENST00000514967 NAIPQ13075 1403 aa24.44■■□□□ 1.5
PROM1-218ENST00000514967 SIGLEC1Q9BZZ2 1709 aa24.41■■□□□ 1.5
PROM1-218ENST00000514967 FAM135AQ9P2D6 1515 aa24.41■■□□□ 1.5
PROM1-218ENST00000514967 GCC2Q8IWJ2 1684 aa24.4■■□□□ 1.5
PROM1-218ENST00000514967 RNF17Q9BXT8 1623 aaKnown RBP24.39■■□□□ 1.49
PROM1-218ENST00000514967 KIF3BO15066 747 aa24.36■■□□□ 1.49
PROM1-218ENST00000514967 HRCP23327 699 aa24.36■■□□□ 1.49
PROM1-218ENST00000514967 ARID4BQ4LE39 1312 aaPredicted RBP24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms