RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 KRTAP3-3Q9BYR6 98 aa13.56□□□□□ -0.24
NEDD4-211ENST00000514893 KRTAP3-2Q9BYR7 98 aa13.56□□□□□ -0.24
NEDD4-211ENST00000514893 STK24Q9Y6E0 443 aa13.56□□□□□ -0.24
NEDD4-211ENST00000514893 TMEM92Q6UXU6 159 aa13.55□□□□□ -0.24
NEDD4-211ENST00000514893 ECM2O94769 699 aaPredicted RBP13.54□□□□□ -0.24
NEDD4-211ENST00000514893 STK25O00506 426 aa13.51□□□□□ -0.25
NEDD4-211ENST00000514893 FBXO22Q8NEZ5 403 aa13.49□□□□□ -0.25
NEDD4-211ENST00000514893 VARS2Q5ST30 1063 aaKnown RBP13.46□□□□□ -0.25
NEDD4-211ENST00000514893 GPR153Q6NV75 609 aa13.46□□□□□ -0.25
NEDD4-211ENST00000514893 MFRPQ9BY79 579 aa13.44□□□□□ -0.26
NEDD4-211ENST00000514893 PKD2Q13563 968 aa13.41□□□□□ -0.26
NEDD4-211ENST00000514893 ZNF687Q8N1G0 1237 aa13.4□□□□□ -0.26
NEDD4-211ENST00000514893 ARSIQ5FYB1 569 aa13.39□□□□□ -0.27
NEDD4-211ENST00000514893 RGL2O15211 777 aa13.38□□□□□ -0.27
NEDD4-211ENST00000514893 C2orf72A6NCS6 295 aa13.32□□□□□ -0.28
NEDD4-211ENST00000514893 KIF3CO14782 793 aa13.32□□□□□ -0.28
NEDD4-211ENST00000514893 ZNF316A6NFI3 1004 aaPredicted RBP13.31□□□□□ -0.28
NEDD4-211ENST00000514893 TMC2Q8TDI7 906 aa13.3□□□□□ -0.28
NEDD4-211ENST00000514893 KHSRPQ92945 711 aaKnown RBP eCLIP13.26□□□□□ -0.293e-7■■□□□ 14.5
NEDD4-211ENST00000514893 SLC34A2O95436 690 aa13.25□□□□□ -0.29
NEDD4-211ENST00000514893 PTGER2P43116 358 aa13.25□□□□□ -0.29
NEDD4-211ENST00000514893 RNF166Q96A37 237 aaPredicted RBP13.25□□□□□ -0.29
NEDD4-211ENST00000514893 MYT1LQ9UL68 1186 aa13.25□□□□□ -0.29
NEDD4-211ENST00000514893 ANKRD13DQ6ZTN6 518 aa13.22□□□□□ -0.29
NEDD4-211ENST00000514893 NUDT7P0C024 238 aa13.2□□□□□ -0.3
NEDD4-211ENST00000514893 PCDHGA4Q9Y5G9 962 aa13.2□□□□□ -0.3
NEDD4-211ENST00000514893 PPP1R37O75864 691 aa13.19□□□□□ -0.3
NEDD4-211ENST00000514893 PBX2P40425 430 aa13.17□□□□□ -0.3
NEDD4-211ENST00000514893 LSM11P83369 360 aaKnown RBP eCLIP13.15□□□□□ -0.3
NEDD4-211ENST00000514893 LHX6Q9UPM6 363 aa13.15□□□□□ -0.3
NEDD4-211ENST00000514893 HS6ST3Q8IZP7 471 aa13.14□□□□□ -0.31
NEDD4-211ENST00000514893 PSDA5PKW4 1024 aaPredicted RBP13.12□□□□□ -0.31
NEDD4-211ENST00000514893 CHGAP10645 457 aaKnown RBP13.08□□□□□ -0.32
NEDD4-211ENST00000514893 FOXK1P85037 733 aa13.08□□□□□ -0.32
NEDD4-211ENST00000514893 GPHNQ9NQX3 736 aaPredicted RBP13.08□□□□□ -0.32
NEDD4-211ENST00000514893 PTCD2Q8WV60 388 aaKnown RBP13.07□□□□□ -0.32
NEDD4-211ENST00000514893 TBC1D12O60347 775 aa13.06□□□□□ -0.32
NEDD4-211ENST00000514893 PLPP6Q8IY26 295 aa13.05□□□□□ -0.32
NEDD4-211ENST00000514893 RYDENQ9NUL5 291 aaKnown RBP13.05□□□□□ -0.32
NEDD4-211ENST00000514893 AXIN2Q9Y2T1 843 aa13.04□□□□□ -0.32
NEDD4-211ENST00000514893 ARHGAP33O14559 1287 aa13.03□□□□□ -0.32
NEDD4-211ENST00000514893 POTEEQ6S8J3 1075 aa13□□□□□ -0.33
NEDD4-211ENST00000514893 KDM4FA0A1W2PPD8 638 aa12.99□□□□□ -0.33
NEDD4-211ENST00000514893 DNAJC5Q9H3Z4 198 aa12.99□□□□□ -0.33
NEDD4-211ENST00000514893 DSG2Q14126 1118 aa12.98□□□□□ -0.33
NEDD4-211ENST00000514893 PPP4R3BQ5MIZ7 849 aa12.94□□□□□ -0.34
NEDD4-211ENST00000514893 ADGRD1Q6QNK2 874 aa12.94□□□□□ -0.34
NEDD4-211ENST00000514893 TK2O00142 265 aa12.93□□□□□ -0.34
NEDD4-211ENST00000514893 HCSTQ9UBK5 93 aa12.92□□□□□ -0.34
NEDD4-211ENST00000514893 NKX1-1Q15270 411 aaPredicted RBP12.9□□□□□ -0.34
NEDD4-211ENST00000514893 KCNH8Q96L42 1107 aa12.9□□□□□ -0.34
NEDD4-211ENST00000514893 STAC3Q96MF2 364 aa12.88□□□□□ -0.35
NEDD4-211ENST00000514893 PDE4AP27815 886 aa12.87□□□□□ -0.35
NEDD4-211ENST00000514893 PSEN2P49810 448 aa12.87□□□□□ -0.35
NEDD4-211ENST00000514893 OXER1Q8TDS5 423 aa12.86□□□□□ -0.35
NEDD4-211ENST00000514893 CRISPLD2Q9H0B8 497 aa12.85□□□□□ -0.35
NEDD4-211ENST00000514893 DMRTA1Q5VZB9 504 aa12.84□□□□□ -0.35
NEDD4-211ENST00000514893 PPP1R15BQ5SWA1 713 aa12.83□□□□□ -0.36
NEDD4-211ENST00000514893 UPF1Q92900 1129 aaKnown RBP eCLIP12.82□□□□□ -0.36
NEDD4-211ENST00000514893 HRO43593 1189 aa12.81□□□□□ -0.36
NEDD4-211ENST00000514893 KCNK17Q96T54 332 aa12.79□□□□□ -0.36
NEDD4-211ENST00000514893 PLA2G2EQ9NZK7 142 aa12.79□□□□□ -0.36
NEDD4-211ENST00000514893 ZNF454Q8N9F8 522 aa12.78□□□□□ -0.36
NEDD4-211ENST00000514893 GTPBP6O43824 516 aaPredicted RBP12.75□□□□□ -0.37
NEDD4-211ENST00000514893 NCKAP5LQ9HCH0 1330 aa12.74□□□□□ -0.37
NEDD4-211ENST00000514893 BCL2L12Q9HB09 334 aa12.74□□□□□ -0.37
NEDD4-211ENST00000514893 ANO8Q9HCE9 1232 aaPredicted RBP12.74□□□□□ -0.37
NEDD4-211ENST00000514893 KCTD12Q96CX2 325 aaKnown RBP12.73□□□□□ -0.37
NEDD4-211ENST00000514893 LARP6Q9BRS8 491 aaKnown RBP12.73□□□□□ -0.37
NEDD4-211ENST00000514893 VPS9D1Q9Y2B5 631 aa12.73□□□□□ -0.37
NEDD4-211ENST00000514893 FOSBP53539 338 aa12.72□□□□□ -0.37
NEDD4-211ENST00000514893 SLC4A5Q9BY07 1137 aa12.72□□□□□ -0.37
NEDD4-211ENST00000514893 PTPREP23469 700 aa12.71□□□□□ -0.37
NEDD4-211ENST00000514893 DDX27Q96GQ7 796 aaKnown RBP12.71□□□□□ -0.37
NEDD4-211ENST00000514893 EVI5O60447 810 aa12.69□□□□□ -0.38
NEDD4-211ENST00000514893 MAP3K9P80192 1104 aa12.69□□□□□ -0.38
NEDD4-211ENST00000514893 DCAF8L2P0C7V8 631 aa12.68□□□□□ -0.38
NEDD4-211ENST00000514893 JPH4Q96JJ6 628 aa12.67□□□□□ -0.38
NEDD4-211ENST00000514893 ZDHHC16Q969W1 377 aa12.66□□□□□ -0.38
NEDD4-211ENST00000514893 GOLGA8CPA6NN73 597 aa12.63□□□□□ -0.39
NEDD4-211ENST00000514893 MFSD10Q14728 455 aa12.63□□□□□ -0.39
NEDD4-211ENST00000514893 PTPN5P54829 565 aa12.61□□□□□ -0.39
NEDD4-211ENST00000514893 ZBED2Q9BTP6 218 aa12.61□□□□□ -0.39
NEDD4-211ENST00000514893 BHMG1C9JSJ3 638 aaPredicted RBP12.6□□□□□ -0.39
NEDD4-211ENST00000514893 MRPL50Q8N5N7 158 aaKnown RBP12.6□□□□□ -0.39
NEDD4-211ENST00000514893 ADAM33Q9BZ11 813 aa12.59□□□□□ -0.39
NEDD4-211ENST00000514893 NBPF3Q9H094 633 aa12.57□□□□□ -0.4
NEDD4-211ENST00000514893 WNT2BQ93097 391 aa12.55□□□□□ -0.4
NEDD4-211ENST00000514893 EMILIN3Q9NT22 766 aa12.55□□□□□ -0.4
NEDD4-211ENST00000514893 THSD4Q6ZMP0 1018 aa12.54□□□□□ -0.4
NEDD4-211ENST00000514893 FBXW7Q969H0 707 aa12.53□□□□□ -0.4
NEDD4-211ENST00000514893 PCDHGA10Q9Y5H3 936 aa12.52□□□□□ -0.41
NEDD4-211ENST00000514893 PPP1R3GB7ZBB8 358 aa12.5□□□□□ -0.41
NEDD4-211ENST00000514893 PHF14O94880 888 aa12.5□□□□□ -0.41
NEDD4-211ENST00000514893 TYW1BQ6NUM6 668 aa12.5□□□□□ -0.41
NEDD4-211ENST00000514893 IFFO2Q5TF58 517 aa12.49□□□□□ -0.41
NEDD4-211ENST00000514893 CADPS2Q86UW7 1296 aa12.48□□□□□ -0.41
NEDD4-211ENST00000514893 RABGEF1Q9UJ41 708 aa12.48□□□□□ -0.41
NEDD4-211ENST00000514893 RGS20O76081 388 aa12.46□□□□□ -0.41
NEDD4-211ENST00000514893 EPAS1Q99814 870 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms