RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 WDR7Q9Y4E6 1490 aa11.26□□□□□ -0.61
SMAD1-213ENST00000514778 EPRSP07814 1512 aaKnown RBP11.26□□□□□ -0.61
SMAD1-213ENST00000514778 PLEKHD1A6NEE1 506 aa11.25□□□□□ -0.61
SMAD1-213ENST00000514778 GLI2P10070 1586 aa11.24□□□□□ -0.61
SMAD1-213ENST00000514778 PCF11O94913 1555 aaKnown RBP11.23□□□□□ -0.61
SMAD1-213ENST00000514778 DIP2BQ9P265 1576 aa11.22□□□□□ -0.61
SMAD1-213ENST00000514778 ATP1B4Q9UN42 357 aaPredicted RBP11.21□□□□□ -0.61
SMAD1-213ENST00000514778 MAP3K1Q13233 1512 aa11.2□□□□□ -0.62
SMAD1-213ENST00000514778 FAM69CQ0P6D2 419 aa11.2□□□□□ -0.62
SMAD1-213ENST00000514778 CDK13Q14004 1512 aaKnown RBP11.19□□□□□ -0.62
SMAD1-213ENST00000514778 TROQ12816 1431 aaPredicted RBP11.18□□□□□ -0.62
SMAD1-213ENST00000514778 ARID3CA6NKF2 412 aa11.18□□□□□ -0.62
SMAD1-213ENST00000514778 AKT1S1Q96B36 256 aa11.18□□□□□ -0.62
SMAD1-213ENST00000514778 KCNH8Q96L42 1107 aa11.16□□□□□ -0.62
SMAD1-213ENST00000514778 ABCA9Q8IUA7 1624 aa11.16□□□□□ -0.62
SMAD1-213ENST00000514778 KIF13AQ9H1H9 1805 aa11.16□□□□□ -0.62
SMAD1-213ENST00000514778 CFAP43Q8NDM7 1665 aa11.15□□□□□ -0.62
SMAD1-213ENST00000514778 MAP3K4Q9Y6R4 1608 aa11.15□□□□□ -0.62
SMAD1-213ENST00000514778 LRRIQ1Q96JM4 1722 aa11.15□□□□□ -0.63
SMAD1-213ENST00000514778 PHLDB1Q86UU1 1377 aa11.15□□□□□ -0.63
SMAD1-213ENST00000514778 MAGI3Q5TCQ9 1506 aa11.14□□□□□ -0.63
SMAD1-213ENST00000514778 TEX14Q8IWB6 1497 aa11.14□□□□□ -0.63
SMAD1-213ENST00000514778 CD109Q6YHK3 1445 aa11.14□□□□□ -0.63
SMAD1-213ENST00000514778 TIAM1Q13009 1591 aa11.13□□□□□ -0.63
SMAD1-213ENST00000514778 MTUS2Q5JR59 1369 aa11.13□□□□□ -0.63
SMAD1-213ENST00000514778 KIF14Q15058 1648 aa11.13□□□□□ -0.63
SMAD1-213ENST00000514778 EHBP1L1Q8N3D4 1523 aa11.12□□□□□ -0.63
SMAD1-213ENST00000514778 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.12□□□□□ -0.63
SMAD1-213ENST00000514778 ARAP3Q8WWN8 1544 aa11.11□□□□□ -0.63
SMAD1-213ENST00000514778 CHRDL2Q6WN34 429 aa11.11□□□□□ -0.63
SMAD1-213ENST00000514778 LRRC9Q6ZRR7 1453 aa11.11□□□□□ -0.63
SMAD1-213ENST00000514778 PLCH2O75038 1416 aa11.09□□□□□ -0.63
SMAD1-213ENST00000514778 NEO1Q92859 1461 aa11.09□□□□□ -0.63
SMAD1-213ENST00000514778 TTC37Q6PGP7 1564 aa11.07□□□□□ -0.64
SMAD1-213ENST00000514778 CFAP74Q9C0B2 1584 aa11.07□□□□□ -0.64
SMAD1-213ENST00000514778 PPRC1Q5VV67 1664 aaKnown RBP11.06□□□□□ -0.64
SMAD1-213ENST00000514778 EFCAB2Q5VUJ9 269 aa11.06□□□□□ -0.64
SMAD1-213ENST00000514778 REM2Q8IYK8 340 aaPredicted RBP11.05□□□□□ -0.64
SMAD1-213ENST00000514778 CCNB3Q8WWL7 1395 aa11.04□□□□□ -0.64
SMAD1-213ENST00000514778 SUPT6HQ7KZ85 1726 aaKnown RBP11.04□□□□□ -0.64
SMAD1-213ENST00000514778 SPDYE2BA6NHP3 402 aa11.04□□□□□ -0.64
SMAD1-213ENST00000514778 SPDYE6P0CI01 402 aa11.04□□□□□ -0.64
SMAD1-213ENST00000514778 SPDYE2Q495Y8 402 aa11.04□□□□□ -0.64
SMAD1-213ENST00000514778 FANCAO15360 1455 aa11.04□□□□□ -0.64
SMAD1-213ENST00000514778 GPATCH8Q9UKJ3 1502 aaKnown RBP11.04□□□□□ -0.64
SMAD1-213ENST00000514778 MYO5CQ9NQX4 1742 aa11.04□□□□□ -0.64
SMAD1-213ENST00000514778 KANK4Q5T7N3 995 aaPredicted RBP11.03□□□□□ -0.64
SMAD1-213ENST00000514778 NCOA2Q15596 1464 aa11.03□□□□□ -0.64
SMAD1-213ENST00000514778 AKNAQ7Z591 1439 aa11.02□□□□□ -0.64
SMAD1-213ENST00000514778 MKRN4PQ13434 485 aaPredicted RBP11.02□□□□□ -0.65
SMAD1-213ENST00000514778 PREX2Q70Z35 1606 aa11.02□□□□□ -0.65
SMAD1-213ENST00000514778 ARHGAP5Q13017 1502 aa11.01□□□□□ -0.65
SMAD1-213ENST00000514778 CFDP1Q9UEE9 299 aaPredicted RBP11.01□□□□□ -0.65
SMAD1-213ENST00000514778 TSPOAP1O95153 1857 aa11.01□□□□□ -0.65
SMAD1-213ENST00000514778 MIA2Q96PC5 1412 aa11.01□□□□□ -0.65
SMAD1-213ENST00000514778 PLEKHH2Q8IVE3 1493 aa11□□□□□ -0.65
SMAD1-213ENST00000514778 ITSN2Q9NZM3 1697 aa11□□□□□ -0.65
SMAD1-213ENST00000514778 KIAA1107Q9UPP5 1409 aa11□□□□□ -0.65
SMAD1-213ENST00000514778 KDM6BO15054 1643 aa10.99□□□□□ -0.65
SMAD1-213ENST00000514778 CDC42BPAQ5VT25 1732 aa10.99□□□□□ -0.65
SMAD1-213ENST00000514778 RSPH4AQ5TD94 716 aa10.99□□□□□ -0.65
SMAD1-213ENST00000514778 MYOM3Q5VTT5 1437 aa10.98□□□□□ -0.65
SMAD1-213ENST00000514778 DENND4BO75064 1496 aaPredicted RBP10.98□□□□□ -0.65
SMAD1-213ENST00000514778 ADGRL1O94910 1474 aa10.98□□□□□ -0.65
SMAD1-213ENST00000514778 CDC42BPBQ9Y5S2 1711 aa10.98□□□□□ -0.65
SMAD1-213ENST00000514778 SCAPERQ9BY12 1400 aa10.97□□□□□ -0.65
SMAD1-213ENST00000514778 COL17A1Q9UMD9 1497 aaPredicted RBP10.97□□□□□ -0.65
SMAD1-213ENST00000514778 MAGI2Q86UL8 1455 aa10.96□□□□□ -0.65
SMAD1-213ENST00000514778 ABCC1P33527 1531 aa10.95□□□□□ -0.66
SMAD1-213ENST00000514778 ZNF518AQ6AHZ1 1483 aa10.95□□□□□ -0.66
SMAD1-213ENST00000514778 POGZQ7Z3K3 1410 aa10.95□□□□□ -0.66
SMAD1-213ENST00000514778 SAMD9LQ8IVG5 1584 aa10.94□□□□□ -0.66
SMAD1-213ENST00000514778 ZMYM4Q5VZL5 1548 aa10.93□□□□□ -0.66
SMAD1-213ENST00000514778 PITPNM1O00562 1244 aa10.92□□□□□ -0.66
SMAD1-213ENST00000514778 RAPGEF3O95398 923 aa10.92□□□□□ -0.66
SMAD1-213ENST00000514778 ZNF777Q9ULD5 760 aaPredicted RBP10.92□□□□□ -0.66
SMAD1-213ENST00000514778 MBD5Q9P267 1494 aa10.92□□□□□ -0.66
SMAD1-213ENST00000514778 RICTORQ6R327 1708 aa10.92□□□□□ -0.66
SMAD1-213ENST00000514778 FGD6Q6ZV73 1430 aa10.92□□□□□ -0.66
SMAD1-213ENST00000514778 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.91□□□□□ -0.66
SMAD1-213ENST00000514778 KDM5CP41229 1560 aa10.91□□□□□ -0.66
SMAD1-213ENST00000514778 CAMSAP2Q08AD1 1489 aa10.91□□□□□ -0.66
SMAD1-213ENST00000514778 TCOF1Q13428 1488 aaKnown RBP10.91□□□□□ -0.66
SMAD1-213ENST00000514778 MLH3Q9UHC1 1453 aa10.91□□□□□ -0.66
SMAD1-213ENST00000514778 ARHGEF5Q12774 1597 aa10.9□□□□□ -0.66
SMAD1-213ENST00000514778 FRMPD1Q5SYB0 1578 aa10.9□□□□□ -0.66
SMAD1-213ENST00000514778 ARHGEF12Q9NZN5 1544 aa10.9□□□□□ -0.66
SMAD1-213ENST00000514778 SYCP2Q9BX26 1530 aa10.89□□□□□ -0.67
SMAD1-213ENST00000514778 HNRNPMP52272 730 aaKnown RBP eCLIP10.89□□□□□ -0.67
SMAD1-213ENST00000514778 AFAP1Q8N556 730 aa10.89□□□□□ -0.67
SMAD1-213ENST00000514778 ZNF692Q9BU19 519 aaPredicted RBP10.89□□□□□ -0.67
SMAD1-213ENST00000514778 SSUH2Q9Y2M2 353 aa10.89□□□□□ -0.67
SMAD1-213ENST00000514778 RTEL1-TNFRSF6BF6WH68 1400 aa10.89□□□□□ -0.67
SMAD1-213ENST00000514778 TRAPPC8Q9Y2L5 1435 aa10.89□□□□□ -0.67
SMAD1-213ENST00000514778 ZNF644Q9H582 1327 aaPredicted RBP10.88□□□□□ -0.67
SMAD1-213ENST00000514778 CCDC141Q6ZP82 1450 aa10.88□□□□□ -0.67
SMAD1-213ENST00000514778 PTPN23Q9H3S7 1636 aa10.87□□□□□ -0.67
SMAD1-213ENST00000514778 TSPY4P0CV99 314 aa10.87□□□□□ -0.67
SMAD1-213ENST00000514778 TSPY10P0CW01 314 aa10.87□□□□□ -0.67
SMAD1-213ENST00000514778 SPAG9O60271 1321 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms