RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 FMN1Q68DA7 1419 aa17.89■□□□□ 0.46
UBE2D3-232ENST00000514755 LOC105371045A0A1W2PR82 267 aa17.89■□□□□ 0.45
UBE2D3-232ENST00000514755 CLIP1P30622 1438 aa17.89■□□□□ 0.45
UBE2D3-232ENST00000514755 CDK13Q14004 1512 aaKnown RBP17.88■□□□□ 0.45
UBE2D3-232ENST00000514755 ATP1B4Q9UN42 357 aaPredicted RBP17.86■□□□□ 0.45
UBE2D3-232ENST00000514755 CFAP43Q8NDM7 1665 aa17.85■□□□□ 0.45
UBE2D3-232ENST00000514755 LRRIQ1Q96JM4 1722 aa17.84■□□□□ 0.45
UBE2D3-232ENST00000514755 KDM6BO15054 1643 aa17.84■□□□□ 0.45
UBE2D3-232ENST00000514755 HECW1Q76N89 1606 aa17.84■□□□□ 0.45
UBE2D3-232ENST00000514755 CD109Q6YHK3 1445 aa17.84■□□□□ 0.45
UBE2D3-232ENST00000514755 PCF11O94913 1555 aaKnown RBP17.83■□□□□ 0.44
UBE2D3-232ENST00000514755 COL17A1Q9UMD9 1497 aaPredicted RBP17.82■□□□□ 0.44
UBE2D3-232ENST00000514755 ABCA9Q8IUA7 1624 aa17.81■□□□□ 0.44
UBE2D3-232ENST00000514755 PLEKHD1A6NEE1 506 aa17.81■□□□□ 0.44
UBE2D3-232ENST00000514755 MAGI3Q5TCQ9 1506 aa17.8■□□□□ 0.44
UBE2D3-232ENST00000514755 TEX14Q8IWB6 1497 aa17.8■□□□□ 0.44
UBE2D3-232ENST00000514755 CEP162Q5TB80 1403 aa17.8■□□□□ 0.44
UBE2D3-232ENST00000514755 CASKIN1Q8WXD9 1431 aa17.79■□□□□ 0.44
UBE2D3-232ENST00000514755 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.76■□□□□ 0.436e-33■□□□□ 10.7
UBE2D3-232ENST00000514755 FKBP8Q14318 412 aa17.75■□□□□ 0.43
UBE2D3-232ENST00000514755 TTC37Q6PGP7 1564 aa17.74■□□□□ 0.43
UBE2D3-232ENST00000514755 FYCO1Q9BQS8 1478 aa17.72■□□□□ 0.43
UBE2D3-232ENST00000514755 KIF14Q15058 1648 aa17.7■□□□□ 0.42
UBE2D3-232ENST00000514755 TROQ12816 1431 aaPredicted RBP17.69■□□□□ 0.42
UBE2D3-232ENST00000514755 CCDC18Q5T9S5 1454 aa17.69■□□□□ 0.42
UBE2D3-232ENST00000514755 CDK11AQ9UQ88 783 aaPredicted RBP17.68■□□□□ 0.42
UBE2D3-232ENST00000514755 ARAP3Q8WWN8 1544 aa17.65■□□□□ 0.42
UBE2D3-232ENST00000514755 NEO1Q92859 1461 aa17.64■□□□□ 0.41
UBE2D3-232ENST00000514755 PLCH2O75038 1416 aa17.62■□□□□ 0.41
UBE2D3-232ENST00000514755 FANCAO15360 1455 aa17.62■□□□□ 0.41
UBE2D3-232ENST00000514755 RAPGEF3O95398 923 aa17.61■□□□□ 0.41
UBE2D3-232ENST00000514755 AKNAQ7Z591 1439 aa17.61■□□□□ 0.41
UBE2D3-232ENST00000514755 PHLDB1Q86UU1 1377 aa17.6■□□□□ 0.41
UBE2D3-232ENST00000514755 MYO5CQ9NQX4 1742 aa17.6■□□□□ 0.41
UBE2D3-232ENST00000514755 FRMPD1Q5SYB0 1578 aa17.59■□□□□ 0.41
UBE2D3-232ENST00000514755 VPS8Q8N3P4 1428 aa17.58■□□□□ 0.41
UBE2D3-232ENST00000514755 SPDYE4A6NLX3 237 aa17.56■□□□□ 0.4
UBE2D3-232ENST00000514755 CFAP74Q9C0B2 1584 aa17.56■□□□□ 0.4
UBE2D3-232ENST00000514755 CDC42BPBQ9Y5S2 1711 aa17.55■□□□□ 0.4
UBE2D3-232ENST00000514755 DENND4BO75064 1496 aaPredicted RBP17.54■□□□□ 0.4
UBE2D3-232ENST00000514755 ARHGAP5Q13017 1502 aa17.53■□□□□ 0.4
UBE2D3-232ENST00000514755 RICTORQ6R327 1708 aa17.53■□□□□ 0.4
UBE2D3-232ENST00000514755 ADGRL1O94910 1474 aa17.53■□□□□ 0.4
UBE2D3-232ENST00000514755 PREX2Q70Z35 1606 aa17.53■□□□□ 0.4
UBE2D3-232ENST00000514755 MTUS2Q5JR59 1369 aa17.53■□□□□ 0.4
UBE2D3-232ENST00000514755 CDC42BPAQ5VT25 1732 aa17.52■□□□□ 0.4
UBE2D3-232ENST00000514755 KDM4FA0A1W2PPD8 638 aa17.52■□□□□ 0.4
UBE2D3-232ENST00000514755 EFCAB2Q5VUJ9 269 aa17.52■□□□□ 0.4
UBE2D3-232ENST00000514755 SCAPERQ9BY12 1400 aa17.52■□□□□ 0.4
UBE2D3-232ENST00000514755 TIAM1Q13009 1591 aa17.5■□□□□ 0.39
UBE2D3-232ENST00000514755 EHBP1L1Q8N3D4 1523 aa17.49■□□□□ 0.39
UBE2D3-232ENST00000514755 GPATCH8Q9UKJ3 1502 aaKnown RBP17.49■□□□□ 0.39
UBE2D3-232ENST00000514755 POGZQ7Z3K3 1410 aa17.47■□□□□ 0.39
UBE2D3-232ENST00000514755 ARHGEF12Q9NZN5 1544 aa17.47■□□□□ 0.39
UBE2D3-232ENST00000514755 ZMYM4Q5VZL5 1548 aa17.45■□□□□ 0.38
UBE2D3-232ENST00000514755 YEATS2Q9ULM3 1422 aa17.45■□□□□ 0.38
UBE2D3-232ENST00000514755 ABCC1P33527 1531 aa17.44■□□□□ 0.38
UBE2D3-232ENST00000514755 SPDYE2BA6NHP3 402 aa17.44■□□□□ 0.38
UBE2D3-232ENST00000514755 SPDYE6P0CI01 402 aa17.44■□□□□ 0.38
UBE2D3-232ENST00000514755 SPDYE2Q495Y8 402 aa17.44■□□□□ 0.38
UBE2D3-232ENST00000514755 KANK4Q5T7N3 995 aaPredicted RBP17.44■□□□□ 0.38
UBE2D3-232ENST00000514755 SAMD9LQ8IVG5 1584 aa17.44■□□□□ 0.38
UBE2D3-232ENST00000514755 CCNB3Q8WWL7 1395 aa17.43■□□□□ 0.38
UBE2D3-232ENST00000514755 AFAP1Q8N556 730 aa17.43■□□□□ 0.38
UBE2D3-232ENST00000514755 ZNF777Q9ULD5 760 aaPredicted RBP17.43■□□□□ 0.38
UBE2D3-232ENST00000514755 LRRC9Q6ZRR7 1453 aa17.43■□□□□ 0.38
UBE2D3-232ENST00000514755 ARHGEF40Q8TER5 1519 aa17.42■□□□□ 0.38
UBE2D3-232ENST00000514755 TRAPPC8Q9Y2L5 1435 aa17.42■□□□□ 0.38
UBE2D3-232ENST00000514755 NCOA2Q15596 1464 aa17.41■□□□□ 0.38
UBE2D3-232ENST00000514755 ITSN2Q9NZM3 1697 aa17.41■□□□□ 0.38
UBE2D3-232ENST00000514755 ZFYVE16Q7Z3T8 1539 aa17.41■□□□□ 0.38
UBE2D3-232ENST00000514755 PROM2Q8N271 834 aa17.4■□□□□ 0.38
UBE2D3-232ENST00000514755 CFDP1Q9UEE9 299 aaPredicted RBP17.4■□□□□ 0.38
UBE2D3-232ENST00000514755 SUPT6HQ7KZ85 1726 aaKnown RBP17.4■□□□□ 0.38
UBE2D3-232ENST00000514755 SIGLEC1Q9BZZ2 1709 aa17.4■□□□□ 0.38
UBE2D3-232ENST00000514755 MAP3K1Q13233 1512 aa17.4■□□□□ 0.38
UBE2D3-232ENST00000514755 KDM5CP41229 1560 aa17.4■□□□□ 0.38
UBE2D3-232ENST00000514755 ZNF518AQ6AHZ1 1483 aa17.39■□□□□ 0.37
UBE2D3-232ENST00000514755 SYCP2Q9BX26 1530 aa17.38■□□□□ 0.37
UBE2D3-232ENST00000514755 ZNF644Q9H582 1327 aaPredicted RBP17.38■□□□□ 0.37
UBE2D3-232ENST00000514755 MAGI2Q86UL8 1455 aa17.37■□□□□ 0.37
UBE2D3-232ENST00000514755 HNRNPMP52272 730 aaKnown RBP eCLIP17.37■□□□□ 0.374e-13■■■■■ 32.7
UBE2D3-232ENST00000514755 SSUH2Q9Y2M2 353 aa17.35■□□□□ 0.37
UBE2D3-232ENST00000514755 ZNF692Q9BU19 519 aaPredicted RBP17.34■□□□□ 0.37
UBE2D3-232ENST00000514755 HECW2Q9P2P5 1572 aa17.34■□□□□ 0.37
UBE2D3-232ENST00000514755 ARID4BQ4LE39 1312 aaPredicted RBP17.33■□□□□ 0.36
UBE2D3-232ENST00000514755 MLH3Q9UHC1 1453 aa17.32■□□□□ 0.36
UBE2D3-232ENST00000514755 KIAA1107Q9UPP5 1409 aa17.32■□□□□ 0.36
UBE2D3-232ENST00000514755 BCORL1Q5H9F3 1711 aa17.32■□□□□ 0.36
UBE2D3-232ENST00000514755 ABCA6Q8N139 1617 aa17.32■□□□□ 0.36
UBE2D3-232ENST00000514755 DIP2CQ9Y2E4 1556 aa17.32■□□□□ 0.36
UBE2D3-232ENST00000514755 ATP10AO60312 1499 aa17.31■□□□□ 0.36
UBE2D3-232ENST00000514755 KIDINS220Q9ULH0 1771 aa17.31■□□□□ 0.36
UBE2D3-232ENST00000514755 MYT1LQ9UL68 1186 aa17.31■□□□□ 0.36
UBE2D3-232ENST00000514755 ADAMTSL3P82987 1691 aa17.31■□□□□ 0.36
UBE2D3-232ENST00000514755 PLEKHH2Q8IVE3 1493 aa17.3■□□□□ 0.36
UBE2D3-232ENST00000514755 MBD5Q9P267 1494 aa17.3■□□□□ 0.36
UBE2D3-232ENST00000514755 C9orf84Q5VXU9 1444 aa17.3■□□□□ 0.36
UBE2D3-232ENST00000514755 CAMSAP2Q08AD1 1489 aa17.28■□□□□ 0.36
UBE2D3-232ENST00000514755 MLECQ14165 292 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms