RNA–Protein interactions for RNA: ENST00000514738.5

CDH6-205, Transcript of cadherin 6, humanhuman

TSL 1 (best) BASIC

Gene CDH6, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-205ENST00000514738 WWC1Q8IX03 1113 aa21.13■□□□□ 0.97
CDH6-205ENST00000514738 FAM13BQ9NYF5 915 aa21.12■□□□□ 0.97
CDH6-205ENST00000514738 DNTTIP2Q5QJE6 756 aaKnown RBP21.09■□□□□ 0.97
CDH6-205ENST00000514738 ERBB4Q15303 1308 aa21.07■□□□□ 0.96
CDH6-205ENST00000514738 AMER1Q5JTC6 1135 aaPredicted RBP21.07■□□□□ 0.96
CDH6-205ENST00000514738 PANK2Q9BZ23 570 aa21.06■□□□□ 0.96
CDH6-205ENST00000514738 MS4A1P11836 297 aa21.05■□□□□ 0.96
CDH6-205ENST00000514738 E9PSI1 815 aa21.05■□□□□ 0.96
CDH6-205ENST00000514738 MAPK8IP2Q13387 824 aaPredicted RBP21.05■□□□□ 0.96
CDH6-205ENST00000514738 MTERF4Q7Z6M4 381 aaKnown RBP21.05■□□□□ 0.96
CDH6-205ENST00000514738 GOLGA6L3A6NEY3 463 aa21.03■□□□□ 0.96
CDH6-205ENST00000514738 GTPBP4Q9BZE4 634 aaKnown RBP21.02■□□□□ 0.96
CDH6-205ENST00000514738 ZCCHC6Q5VYS8 1495 aaKnown RBP21.02■□□□□ 0.96
CDH6-205ENST00000514738 LETM1O95202 739 aaPredicted RBP21.02■□□□□ 0.96
CDH6-205ENST00000514738 MMP14P50281 582 aa21.02■□□□□ 0.96
CDH6-205ENST00000514738 TAF3Q5VWG9 929 aa21.02■□□□□ 0.96
CDH6-205ENST00000514738 ZBTB22O15209 634 aa21.01■□□□□ 0.95
CDH6-205ENST00000514738 ARID3AQ99856 593 aa21.01■□□□□ 0.95
CDH6-205ENST00000514738 TERF1P54274 439 aa21.01■□□□□ 0.95
CDH6-205ENST00000514738 SLC52A1Q9NWF4 448 aa21■□□□□ 0.95
CDH6-205ENST00000514738 HDAC5Q9UQL6 1122 aa21■□□□□ 0.95
CDH6-205ENST00000514738 FSD2A1L4K1 749 aa20.99■□□□□ 0.95
CDH6-205ENST00000514738 CLGNO14967 610 aa20.98■□□□□ 0.95
CDH6-205ENST00000514738 PEG3Q9GZU2 1588 aa20.97■□□□□ 0.95
CDH6-205ENST00000514738 CERS3Q8IU89 383 aa20.93■□□□□ 0.94
CDH6-205ENST00000514738 FAM193AP78312 1265 aa20.93■□□□□ 0.94
CDH6-205ENST00000514738 ZBED9Q6R2W3 1325 aa20.92■□□□□ 0.94
CDH6-205ENST00000514738 MYCNP04198 464 aaPredicted RBP20.92■□□□□ 0.94
CDH6-205ENST00000514738 CCDC94Q9BW85 323 aaPredicted RBP20.92■□□□□ 0.94
CDH6-205ENST00000514738 RNF123Q5XPI4 1314 aa20.91■□□□□ 0.94
CDH6-205ENST00000514738 MYH16Q9H6N6 1097 aa20.91■□□□□ 0.94
CDH6-205ENST00000514738 OFD1O75665 1012 aa20.91■□□□□ 0.94
CDH6-205ENST00000514738 PSEN1P49768 467 aa20.9■□□□□ 0.94
CDH6-205ENST00000514738 FBXO3Q9UK99 471 aa20.9■□□□□ 0.94
CDH6-205ENST00000514738 AKNAQ7Z591 1439 aa20.9■□□□□ 0.94
CDH6-205ENST00000514738 APPP05067 770 aa20.89■□□□□ 0.93
CDH6-205ENST00000514738 TRIM44Q96DX7 344 aaPredicted RBP20.89■□□□□ 0.93
CDH6-205ENST00000514738 PATL2C9JE40 543 aaKnown RBP20.88■□□□□ 0.93
CDH6-205ENST00000514738 DCAF8L2P0C7V8 631 aa20.87■□□□□ 0.93
CDH6-205ENST00000514738 TMED8Q6PL24 325 aaPredicted RBP20.87■□□□□ 0.93
CDH6-205ENST00000514738 HIRIP3Q9BW71 556 aaPredicted RBP20.87■□□□□ 0.93
CDH6-205ENST00000514738 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.86■□□□□ 0.93
CDH6-205ENST00000514738 CGNQ9P2M7 1197 aaKnown RBP20.86■□□□□ 0.93
CDH6-205ENST00000514738 MRE11P49959 708 aa20.85■□□□□ 0.93
CDH6-205ENST00000514738 SLC20A2Q08357 652 aa20.85■□□□□ 0.93
CDH6-205ENST00000514738 IRX5P78411 483 aaPredicted RBP20.84■□□□□ 0.93
CDH6-205ENST00000514738 AEBP1Q8IUX7 1158 aa20.84■□□□□ 0.93
CDH6-205ENST00000514738 TMC1Q8TDI8 760 aa20.84■□□□□ 0.93
CDH6-205ENST00000514738 NGEFQ8N5V2 710 aa20.83■□□□□ 0.93
CDH6-205ENST00000514738 WDR97A6NE52 1622 aa20.83■□□□□ 0.92
CDH6-205ENST00000514738 POLR3GLQ9BT43 218 aa20.83■□□□□ 0.92
CDH6-205ENST00000514738 SOX12O15370 315 aa20.81■□□□□ 0.92
CDH6-205ENST00000514738 ZNF622Q969S3 477 aaKnown RBP eCLIP20.81■□□□□ 0.92
CDH6-205ENST00000514738 DNAJC2Q99543 621 aaKnown RBP20.81■□□□□ 0.92
CDH6-205ENST00000514738 GRIPAP1Q4V328 841 aa20.81■□□□□ 0.92
CDH6-205ENST00000514738 TNIKQ9UKE5 1360 aa20.8■□□□□ 0.92
CDH6-205ENST00000514738 PTMAP06454 111 aaKnown RBP20.8■□□□□ 0.92
CDH6-205ENST00000514738 P3H3Q8IVL6 736 aa20.8■□□□□ 0.92
CDH6-205ENST00000514738 SMG6Q86US8 1419 aaKnown RBP20.79■□□□□ 0.92
CDH6-205ENST00000514738 AXDND1Q5T1B0 1012 aaPredicted RBP20.79■□□□□ 0.92
CDH6-205ENST00000514738 UQCRHLA0A096LP55 91 aa20.78■□□□□ 0.92
CDH6-205ENST00000514738 DYNC1I1O14576 645 aa20.78■□□□□ 0.92
CDH6-205ENST00000514738 UQCRHP07919 91 aa20.78■□□□□ 0.92
CDH6-205ENST00000514738 R3HCC1Q9Y3T6 440 aaKnown RBP20.78■□□□□ 0.92
CDH6-205ENST00000514738 TAOK2Q9UL54 1235 aa20.76■□□□□ 0.91
CDH6-205ENST00000514738 PTMSP20962 102 aa20.74■□□□□ 0.91
CDH6-205ENST00000514738 CHMP4CQ96CF2 233 aa20.74■□□□□ 0.91
CDH6-205ENST00000514738 GRPEL1Q9HAV7 217 aa20.73■□□□□ 0.91
CDH6-205ENST00000514738 FAM43BQ6ZT52 329 aaPredicted RBP20.72■□□□□ 0.91
CDH6-205ENST00000514738 TICAM2Q86XR7 235 aa20.71■□□□□ 0.91
CDH6-205ENST00000514738 FAM9BQ8IZU0 186 aa20.71■□□□□ 0.91
CDH6-205ENST00000514738 CBX1P83916 185 aa20.71■□□□□ 0.91
CDH6-205ENST00000514738 GZF1Q9H116 711 aaPredicted RBP20.71■□□□□ 0.91
CDH6-205ENST00000514738 NUDCQ9Y266 331 aa20.7■□□□□ 0.9
CDH6-205ENST00000514738 CCDC9Q9Y3X0 531 aaKnown RBP20.7■□□□□ 0.9
CDH6-205ENST00000514738 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.7■□□□□ 0.9
CDH6-205ENST00000514738 CCDC184Q52MB2 194 aa20.69■□□□□ 0.9
CDH6-205ENST00000514738 ZSCAN30Q86W11 494 aa20.68■□□□□ 0.9
CDH6-205ENST00000514738 KCNJ4P48050 445 aa20.67■□□□□ 0.9
CDH6-205ENST00000514738 GEMIN8Q9NWZ8 242 aaKnown RBP20.66■□□□□ 0.9
CDH6-205ENST00000514738 YY1AP1Q9H869 796 aa20.66■□□□□ 0.9
CDH6-205ENST00000514738 ZBTB9Q96C00 473 aa20.65■□□□□ 0.9
CDH6-205ENST00000514738 CC2D1BQ5T0F9 858 aaKnown RBP20.64■□□□□ 0.9
CDH6-205ENST00000514738 RALBP1Q15311 655 aa20.64■□□□□ 0.89
CDH6-205ENST00000514738 MSNP26038 577 aaKnown RBP20.62■□□□□ 0.89
CDH6-205ENST00000514738 ISY1Q9ULR0 285 aaKnown RBP20.62■□□□□ 0.89
CDH6-205ENST00000514738 PRR29P0C7W0 189 aa20.61■□□□□ 0.89
CDH6-205ENST00000514738 EXOC6Q8TAG9 804 aa20.61■□□□□ 0.89
CDH6-205ENST00000514738 SMARCA2P51531 1590 aa20.59■□□□□ 0.89
CDH6-205ENST00000514738 CARD10Q9BWT7 1032 aa20.59■□□□□ 0.89
CDH6-205ENST00000514738 PHF14O94880 888 aa20.58■□□□□ 0.89
CDH6-205ENST00000514738 MAPKBP1O60336 1514 aa20.58■□□□□ 0.89
CDH6-205ENST00000514738 PHLDB1Q86UU1 1377 aa20.58■□□□□ 0.88
CDH6-205ENST00000514738 MCCP23508 829 aa20.57■□□□□ 0.88
CDH6-205ENST00000514738 SKAP1Q86WV1 359 aa20.55■□□□□ 0.88
CDH6-205ENST00000514738 ATP2B3Q16720 1220 aa20.55■□□□□ 0.88
CDH6-205ENST00000514738 SLKQ9H2G2 1235 aaPredicted RBP20.55■□□□□ 0.88
CDH6-205ENST00000514738 TRIM6-TRIM34B2RNG4 842 aa20.54■□□□□ 0.88
CDH6-205ENST00000514738 ZNF771Q7L3S4 317 aaPredicted RBP20.54■□□□□ 0.88
CDH6-205ENST00000514738 PLCD4Q9BRC7 762 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms