RNA–Protein interactions for RNA: ENST00000514520.5

CNGA1-208, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

TSL 2

Gene CNGA1, Length 405 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-208ENST00000514520 FAM205CA6NFA0 338 aa10.72□□□□□ -0.69
CNGA1-208ENST00000514520 KIF3CO14782 793 aa10.71□□□□□ -0.69
CNGA1-208ENST00000514520 HOXB1P14653 301 aaPredicted RBP10.71□□□□□ -0.69
CNGA1-208ENST00000514520 HS6ST3Q8IZP7 471 aa10.71□□□□□ -0.69
CNGA1-208ENST00000514520 KRTAP3-3Q9BYR6 98 aa10.71□□□□□ -0.69
CNGA1-208ENST00000514520 KRTAP3-2Q9BYR7 98 aa10.71□□□□□ -0.69
CNGA1-208ENST00000514520 NKX1-1Q15270 411 aaPredicted RBP10.69□□□□□ -0.7
CNGA1-208ENST00000514520 C2orf72A6NCS6 295 aa10.67□□□□□ -0.7
CNGA1-208ENST00000514520 DOK7Q18PE1 504 aa10.67□□□□□ -0.7
CNGA1-208ENST00000514520 GPR153Q6NV75 609 aa10.67□□□□□ -0.7
CNGA1-208ENST00000514520 KHSRPQ92945 711 aaKnown RBP eCLIP10.65□□□□□ -0.7
CNGA1-208ENST00000514520 ZNF710Q8N1W2 664 aa10.64□□□□□ -0.71
CNGA1-208ENST00000514520 CHGAP10645 457 aaKnown RBP10.63□□□□□ -0.71
CNGA1-208ENST00000514520 SPNS2Q8IVW8 549 aa10.63□□□□□ -0.71
CNGA1-208ENST00000514520 ARSIQ5FYB1 569 aa10.6□□□□□ -0.71
CNGA1-208ENST00000514520 MMRN1Q13201 1228 aa10.59□□□□□ -0.71
CNGA1-208ENST00000514520 RIMBP2O15034 1052 aa10.58□□□□□ -0.72
CNGA1-208ENST00000514520 VARS2Q5ST30 1063 aaKnown RBP10.58□□□□□ -0.72
CNGA1-208ENST00000514520 DNAJC5Q9H3Z4 198 aa10.58□□□□□ -0.72
CNGA1-208ENST00000514520 ZSWIM6Q9HCJ5 1215 aa10.57□□□□□ -0.72
CNGA1-208ENST00000514520 ERBB3P21860 1342 aa10.57□□□□□ -0.72
CNGA1-208ENST00000514520 NUDT7P0C024 238 aa10.49□□□□□ -0.73
CNGA1-208ENST00000514520 TMC2Q8TDI7 906 aa10.49□□□□□ -0.73
CNGA1-208ENST00000514520 PCDHGA4Q9Y5G9 962 aa10.49□□□□□ -0.73
CNGA1-208ENST00000514520 KDM4FA0A1W2PPD8 638 aa10.48□□□□□ -0.73
CNGA1-208ENST00000514520 SLC34A2O95436 690 aa10.48□□□□□ -0.73
CNGA1-208ENST00000514520 ZNF316A6NFI3 1004 aaPredicted RBP10.47□□□□□ -0.73
CNGA1-208ENST00000514520 DSG2Q14126 1118 aa10.47□□□□□ -0.73
CNGA1-208ENST00000514520 POTEEQ6S8J3 1075 aa10.47□□□□□ -0.73
CNGA1-208ENST00000514520 GTPBP6O43824 516 aaPredicted RBP10.46□□□□□ -0.73
CNGA1-208ENST00000514520 ZNF687Q8N1G0 1237 aa10.46□□□□□ -0.73
CNGA1-208ENST00000514520 GPHNQ9NQX3 736 aaPredicted RBP10.45□□□□□ -0.74
CNGA1-208ENST00000514520 FOXK1P85037 733 aa10.44□□□□□ -0.74
CNGA1-208ENST00000514520 PLPP6Q8IY26 295 aa10.43□□□□□ -0.74
CNGA1-208ENST00000514520 LHX6Q9UPM6 363 aa10.43□□□□□ -0.74
CNGA1-208ENST00000514520 NCKAP5LQ9HCH0 1330 aa10.42□□□□□ -0.74
CNGA1-208ENST00000514520 CRISPLD2Q9H0B8 497 aa10.42□□□□□ -0.74
CNGA1-208ENST00000514520 PTCD2Q8WV60 388 aaKnown RBP10.4□□□□□ -0.74
CNGA1-208ENST00000514520 CADPS2Q86UW7 1296 aa10.36□□□□□ -0.75
CNGA1-208ENST00000514520 AXIN2Q9Y2T1 843 aa10.36□□□□□ -0.75
CNGA1-208ENST00000514520 DCAF8L2P0C7V8 631 aa10.34□□□□□ -0.75
CNGA1-208ENST00000514520 OXER1Q8TDS5 423 aa10.32□□□□□ -0.76
CNGA1-208ENST00000514520 LSM11P83369 360 aaKnown RBP eCLIP10.31□□□□□ -0.76
CNGA1-208ENST00000514520 PPP1R15BQ5SWA1 713 aa10.31□□□□□ -0.76
CNGA1-208ENST00000514520 ANKRD13DQ6ZTN6 518 aa10.29□□□□□ -0.76
CNGA1-208ENST00000514520 UPF1Q92900 1129 aaKnown RBP eCLIP10.29□□□□□ -0.76
CNGA1-208ENST00000514520 RNF166Q96A37 237 aaPredicted RBP10.29□□□□□ -0.76
CNGA1-208ENST00000514520 RYDENQ9NUL5 291 aaKnown RBP10.28□□□□□ -0.76
CNGA1-208ENST00000514520 PTGER2P43116 358 aa10.27□□□□□ -0.77
CNGA1-208ENST00000514520 RTN4Q9NQC3 1192 aaKnown RBP10.27□□□□□ -0.77
CNGA1-208ENST00000514520 MYT1LQ9UL68 1186 aa10.27□□□□□ -0.77
CNGA1-208ENST00000514520 MFSD10Q14728 455 aa10.26□□□□□ -0.77
CNGA1-208ENST00000514520 DMRTA1Q5VZB9 504 aa10.25□□□□□ -0.77
CNGA1-208ENST00000514520 PSEN2P49810 448 aa10.24□□□□□ -0.77
CNGA1-208ENST00000514520 LARP6Q9BRS8 491 aaKnown RBP10.24□□□□□ -0.77
CNGA1-208ENST00000514520 EMILIN3Q9NT22 766 aa10.24□□□□□ -0.77
CNGA1-208ENST00000514520 PBX2P40425 430 aa10.23□□□□□ -0.77
CNGA1-208ENST00000514520 PDE4AP27815 886 aa10.2□□□□□ -0.78
CNGA1-208ENST00000514520 DDX27Q96GQ7 796 aaKnown RBP10.2□□□□□ -0.78
CNGA1-208ENST00000514520 ARHGAP33O14559 1287 aa10.19□□□□□ -0.78
CNGA1-208ENST00000514520 ADGRD1Q6QNK2 874 aa10.18□□□□□ -0.78
CNGA1-208ENST00000514520 PSDA5PKW4 1024 aaPredicted RBP10.16□□□□□ -0.78
CNGA1-208ENST00000514520 HRO43593 1189 aa10.15□□□□□ -0.78
CNGA1-208ENST00000514520 TBC1D12O60347 775 aa10.15□□□□□ -0.78
CNGA1-208ENST00000514520 FOSBP53539 338 aa10.15□□□□□ -0.78
CNGA1-208ENST00000514520 PPP4R3BQ5MIZ7 849 aa10.15□□□□□ -0.78
CNGA1-208ENST00000514520 ANO8Q9HCE9 1232 aaPredicted RBP10.15□□□□□ -0.78
CNGA1-208ENST00000514520 ZNF454Q8N9F8 522 aa10.14□□□□□ -0.79
CNGA1-208ENST00000514520 BBXQ8WY36 941 aaPredicted RBP10.14□□□□□ -0.79
CNGA1-208ENST00000514520 KCNK17Q96T54 332 aa10.14□□□□□ -0.79
CNGA1-208ENST00000514520 EVI5O60447 810 aa10.13□□□□□ -0.79
CNGA1-208ENST00000514520 AMER1Q5JTC6 1135 aaPredicted RBP10.12□□□□□ -0.79
CNGA1-208ENST00000514520 CAMK2BQ13554 666 aa10.1□□□□□ -0.79
CNGA1-208ENST00000514520 ADAM33Q9BZ11 813 aa10.1□□□□□ -0.79
CNGA1-208ENST00000514520 JPH4Q96JJ6 628 aa10.09□□□□□ -0.79
CNGA1-208ENST00000514520 BCL2L12Q9HB09 334 aa10.09□□□□□ -0.79
CNGA1-208ENST00000514520 TK2O00142 265 aa10.08□□□□□ -0.8
CNGA1-208ENST00000514520 VPS9D1Q9Y2B5 631 aa10.07□□□□□ -0.8
CNGA1-208ENST00000514520 PCDHGA10Q9Y5H3 936 aa10.06□□□□□ -0.8
CNGA1-208ENST00000514520 DPYSL4O14531 572 aa10.04□□□□□ -0.8
CNGA1-208ENST00000514520 MAP3K9P80192 1104 aa10.04□□□□□ -0.8
CNGA1-208ENST00000514520 ZDHHC16Q969W1 377 aa10.02□□□□□ -0.81
CNGA1-208ENST00000514520 ZBED2Q9BTP6 218 aa10.02□□□□□ -0.81
CNGA1-208ENST00000514520 COL9A1P20849 921 aa10.01□□□□□ -0.81
CNGA1-208ENST00000514520 BHMG1C9JSJ3 638 aaPredicted RBP10□□□□□ -0.81
CNGA1-208ENST00000514520 SPRYD3Q8NCJ5 442 aa10□□□□□ -0.81
CNGA1-208ENST00000514520 KCNH8Q96L42 1107 aa10□□□□□ -0.81
CNGA1-208ENST00000514520 PTPREP23469 700 aa9.99□□□□□ -0.81
CNGA1-208ENST00000514520 SLC4A5Q9BY07 1137 aa9.99□□□□□ -0.81
CNGA1-208ENST00000514520 HCSTQ9UBK5 93 aa9.99□□□□□ -0.81
CNGA1-208ENST00000514520 PAXIP1Q6ZW49 1069 aaPredicted RBP9.98□□□□□ -0.81
CNGA1-208ENST00000514520 KCTD12Q96CX2 325 aaKnown RBP9.97□□□□□ -0.81
CNGA1-208ENST00000514520 STAC3Q96MF2 364 aa9.97□□□□□ -0.81
CNGA1-208ENST00000514520 PROX2Q3B8N5 592 aa9.96□□□□□ -0.82
CNGA1-208ENST00000514520 PRIM1P49642 420 aaKnown RBP9.95□□□□□ -0.82
CNGA1-208ENST00000514520 CFAP44Q96MT7 982 aa9.95□□□□□ -0.82
CNGA1-208ENST00000514520 PHF14O94880 888 aa9.94□□□□□ -0.82
CNGA1-208ENST00000514520 TYW1BQ6NUM6 668 aa9.93□□□□□ -0.82
CNGA1-208ENST00000514520 DDX12PQ92771 950 aa9.93□□□□□ -0.82
CNGA1-208ENST00000514520 PPP1R3GB7ZBB8 358 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms