RNA–Protein interactions for RNA: ENST00000514279.5

AFP-206, Transcript of alpha fetoprotein, humanhuman

TSL 2

Gene AFP, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-206ENST00000514279 ILDR1Q86SU0 546 aaPredicted RBP11.42□□□□□ -0.58
AFP-206ENST00000514279 CABP2Q9NPB3 220 aa11.42□□□□□ -0.58
AFP-206ENST00000514279 PTGER2P43116 358 aa11.41□□□□□ -0.58
AFP-206ENST00000514279 DPY19L2Q6NUT2 758 aa11.39□□□□□ -0.59
AFP-206ENST00000514279 ZNF687Q8N1G0 1237 aa11.38□□□□□ -0.59
AFP-206ENST00000514279 G3V3G9 751 aa11.37□□□□□ -0.59
AFP-206ENST00000514279 BOLA1Q9Y3E2 137 aa11.37□□□□□ -0.59
AFP-206ENST00000514279 RIMBP2O15034 1052 aa11.34□□□□□ -0.59
AFP-206ENST00000514279 NCAPD3P42695 1498 aa11.32□□□□□ -0.6
AFP-206ENST00000514279 BAZ1AQ9NRL2 1556 aaPredicted RBP11.31□□□□□ -0.6
AFP-206ENST00000514279 ATAD2BQ9ULI0 1458 aa11.29□□□□□ -0.6
AFP-206ENST00000514279 SMARCA2P51531 1590 aa11.27□□□□□ -0.61
AFP-206ENST00000514279 SMARCA4P51532 1647 aa11.27□□□□□ -0.61
AFP-206ENST00000514279 ZSWIM6Q9HCJ5 1215 aa11.26□□□□□ -0.61
AFP-206ENST00000514279 ANKRD13DQ6ZTN6 518 aa11.25□□□□□ -0.61
AFP-206ENST00000514279 PLA2G2EQ9NZK7 142 aa11.25□□□□□ -0.61
AFP-206ENST00000514279 EFCAB3Q8N7B9 438 aa11.24□□□□□ -0.61
AFP-206ENST00000514279 TRIM41Q8WV44 630 aa11.21□□□□□ -0.61
AFP-206ENST00000514279 MROH2BQ7Z745 1585 aa11.2□□□□□ -0.62
AFP-206ENST00000514279 GPR153Q6NV75 609 aa11.2□□□□□ -0.62
AFP-206ENST00000514279 BAZ1BQ9UIG0 1483 aaKnown RBP11.19□□□□□ -0.62
AFP-206ENST00000514279 HMGXB3Q12766 1538 aa11.19□□□□□ -0.62
AFP-206ENST00000514279 PEG3Q9GZU2 1588 aa11.16□□□□□ -0.62
AFP-206ENST00000514279 LSM11P83369 360 aaKnown RBP eCLIP11.14□□□□□ -0.63
AFP-206ENST00000514279 RIOK3O14730 519 aaKnown RBP11.12□□□□□ -0.63
AFP-206ENST00000514279 MICALL2Q8IY33 904 aa11.12□□□□□ -0.63
AFP-206ENST00000514279 TMEM92Q6UXU6 159 aa11.11□□□□□ -0.63
AFP-206ENST00000514279 RNF25Q96BH1 459 aaPredicted RBP11.11□□□□□ -0.63
AFP-206ENST00000514279 RSF1Q96T23 1441 aaPredicted RBP11.1□□□□□ -0.63
AFP-206ENST00000514279 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.1□□□□□ -0.63
AFP-206ENST00000514279 ZFP91Q96JP5 570 aaPredicted RBP11.1□□□□□ -0.63
AFP-206ENST00000514279 HCSTQ9UBK5 93 aa11.1□□□□□ -0.63
AFP-206ENST00000514279 PHF8Q9UPP1 1060 aa11.08□□□□□ -0.64
AFP-206ENST00000514279 ZNF316A6NFI3 1004 aaPredicted RBP11.07□□□□□ -0.64
AFP-206ENST00000514279 SOX12O15370 315 aa11.07□□□□□ -0.64
AFP-206ENST00000514279 ARSIQ5FYB1 569 aa11.07□□□□□ -0.64
AFP-206ENST00000514279 MS4A4AQ96JQ5 239 aa11.07□□□□□ -0.64
AFP-206ENST00000514279 VGFO15240 615 aaPredicted RBP11.06□□□□□ -0.64
AFP-206ENST00000514279 ERCC6Q03468 1493 aa11.06□□□□□ -0.64
AFP-206ENST00000514279 WIZO95785 1651 aa11.04□□□□□ -0.64
AFP-206ENST00000514279 CADPSQ9ULU8 1353 aa11.03□□□□□ -0.64
AFP-206ENST00000514279 PDS5BQ9NTI5 1447 aa11.01□□□□□ -0.65
AFP-206ENST00000514279 NESP48681 1621 aa11□□□□□ -0.65
AFP-206ENST00000514279 PBX2P40425 430 aa11□□□□□ -0.65
AFP-206ENST00000514279 KHSRPQ92945 711 aaKnown RBP eCLIP11□□□□□ -0.65
AFP-206ENST00000514279 LAMC3Q9Y6N6 1575 aa10.99□□□□□ -0.65
AFP-206ENST00000514279 TOP2AP11388 1531 aaKnown RBP10.96□□□□□ -0.65
AFP-206ENST00000514279 BCL11BQ9C0K0 894 aaPredicted RBP10.96□□□□□ -0.65
AFP-206ENST00000514279 NLRP6P59044 892 aa10.95□□□□□ -0.66
AFP-206ENST00000514279 CUX2O14529 1486 aa10.94□□□□□ -0.66
AFP-206ENST00000514279 STK24Q9Y6E0 443 aa10.94□□□□□ -0.66
AFP-206ENST00000514279 POTEEQ6S8J3 1075 aa10.93□□□□□ -0.66
AFP-206ENST00000514279 AXIN2Q9Y2T1 843 aa10.92□□□□□ -0.66
AFP-206ENST00000514279 FBXO22Q8NEZ5 403 aa10.91□□□□□ -0.66
AFP-206ENST00000514279 TAOK2Q9UL54 1235 aa10.91□□□□□ -0.66
AFP-206ENST00000514279 CFTRP13569 1480 aa10.89□□□□□ -0.67
AFP-206ENST00000514279 SUPT5HO00267 1087 aaKnown RBP10.89□□□□□ -0.67
AFP-206ENST00000514279 IRX2Q9BZI1 471 aaPredicted RBP10.89□□□□□ -0.67
AFP-206ENST00000514279 STK25O00506 426 aa10.88□□□□□ -0.67
AFP-206ENST00000514279 CCDC88BA6NC98 1476 aa10.87□□□□□ -0.67
AFP-206ENST00000514279 RGS20O76081 388 aa10.87□□□□□ -0.67
AFP-206ENST00000514279 ADGRD1Q6QNK2 874 aa10.87□□□□□ -0.67
AFP-206ENST00000514279 MFRPQ9BY79 579 aa10.87□□□□□ -0.67
AFP-206ENST00000514279 FANCD2Q9BXW9 1451 aa10.85□□□□□ -0.67
AFP-206ENST00000514279 ECM2O94769 699 aaPredicted RBP10.84□□□□□ -0.67
AFP-206ENST00000514279 NUDT7P0C024 238 aa10.84□□□□□ -0.67
AFP-206ENST00000514279 CEP164Q9UPV0 1460 aa10.83□□□□□ -0.68
AFP-206ENST00000514279 LHX6Q9UPM6 363 aa10.83□□□□□ -0.68
AFP-206ENST00000514279 MRC2Q9UBG0 1479 aa10.82□□□□□ -0.68
AFP-206ENST00000514279 C2orf72A6NCS6 295 aa10.82□□□□□ -0.68
AFP-206ENST00000514279 KIF3CO14782 793 aa10.79□□□□□ -0.68
AFP-206ENST00000514279 KIF21AQ7Z4S6 1674 aa10.79□□□□□ -0.68
AFP-206ENST00000514279 ARHGAP33O14559 1287 aa10.78□□□□□ -0.68
AFP-206ENST00000514279 THOC2Q8NI27 1593 aaKnown RBP10.77□□□□□ -0.68
AFP-206ENST00000514279 DNAJC5Q9H3Z4 198 aa10.77□□□□□ -0.69
AFP-206ENST00000514279 HRO43593 1189 aa10.76□□□□□ -0.69
AFP-206ENST00000514279 KCTD12Q96CX2 325 aaKnown RBP10.76□□□□□ -0.69
AFP-206ENST00000514279 TK2O00142 265 aa10.75□□□□□ -0.69
AFP-206ENST00000514279 RGL2O15211 777 aa10.75□□□□□ -0.69
AFP-206ENST00000514279 TMC2Q8TDI7 906 aa10.74□□□□□ -0.69
AFP-206ENST00000514279 WDR62O43379 1518 aa10.74□□□□□ -0.69
AFP-206ENST00000514279 IFFO2Q5TF58 517 aa10.73□□□□□ -0.69
AFP-206ENST00000514279 PCDHGA4Q9Y5G9 962 aa10.73□□□□□ -0.69
AFP-206ENST00000514279 ABCC8Q09428 1581 aa10.73□□□□□ -0.69
AFP-206ENST00000514279 PKD2Q13563 968 aa10.7□□□□□ -0.7
AFP-206ENST00000514279 URB2Q14146 1524 aaKnown RBP10.69□□□□□ -0.7
AFP-206ENST00000514279 SLC34A2O95436 690 aa10.68□□□□□ -0.7
AFP-206ENST00000514279 DMRTA1Q5VZB9 504 aa10.68□□□□□ -0.7
AFP-206ENST00000514279 A0A0G2JS52 829 aa10.67□□□□□ -0.7
AFP-206ENST00000514279 PSDA5PKW4 1024 aaPredicted RBP10.67□□□□□ -0.7
AFP-206ENST00000514279 PPP1R37O75864 691 aa10.67□□□□□ -0.7
AFP-206ENST00000514279 STAC3Q96MF2 364 aa10.66□□□□□ -0.7
AFP-206ENST00000514279 PRDM2Q13029 1718 aa10.65□□□□□ -0.7
AFP-206ENST00000514279 PSEN2P49810 448 aa10.64□□□□□ -0.71
AFP-206ENST00000514279 PTPN5P54829 565 aa10.64□□□□□ -0.71
AFP-206ENST00000514279 TOPBP1Q92547 1522 aa10.63□□□□□ -0.71
AFP-206ENST00000514279 IFT140Q96RY7 1462 aa10.63□□□□□ -0.71
AFP-206ENST00000514279 Q6ZNB5 142 aa10.62□□□□□ -0.71
AFP-206ENST00000514279 DNMBPQ6XZF7 1577 aa10.6□□□□□ -0.71
AFP-206ENST00000514279 SOGA1O94964 1423 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms