RNA–Protein interactions for RNA: ENST00000514133.1

SGCB-203, Transcript of sarcoglycan beta, humanhuman

TSL 5

Gene SGCB, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-203ENST00000514133 NBR1Q14596 966 aa8.11□□□□□ -1.11
SGCB-203ENST00000514133 DPY19L2Q6NUT2 758 aa8.11□□□□□ -1.11
SGCB-203ENST00000514133 PCDH10Q9P2E7 1040 aa8.11□□□□□ -1.11
SGCB-203ENST00000514133 PHF8Q9UPP1 1060 aa8.11□□□□□ -1.11
SGCB-203ENST00000514133 MFRPQ9BY79 579 aa8.1□□□□□ -1.11
SGCB-203ENST00000514133 MICALL2Q8IY33 904 aa8.09□□□□□ -1.11
SGCB-203ENST00000514133 MS4A4AQ96JQ5 239 aa8.09□□□□□ -1.11
SGCB-203ENST00000514133 FAM163AQ96GL9 167 aaPredicted RBP8.06□□□□□ -1.12
SGCB-203ENST00000514133 DOK7Q18PE1 504 aa8.03□□□□□ -1.12
SGCB-203ENST00000514133 POTEMA6NI47 508 aa8.02□□□□□ -1.13
SGCB-203ENST00000514133 RIMBP2O15034 1052 aa8.02□□□□□ -1.13
SGCB-203ENST00000514133 ZSWIM6Q9HCJ5 1215 aa8.02□□□□□ -1.13
SGCB-203ENST00000514133 POTEGQ6S5H5 508 aa8.01□□□□□ -1.13
SGCB-203ENST00000514133 ST18O60284 1047 aa8□□□□□ -1.13
SGCB-203ENST00000514133 LCE2DQ5TA82 110 aaPredicted RBP7.99□□□□□ -1.13
SGCB-203ENST00000514133 NKX1-1Q15270 411 aaPredicted RBP7.97□□□□□ -1.13
SGCB-203ENST00000514133 ZNF710Q8N1W2 664 aa7.96□□□□□ -1.14
SGCB-203ENST00000514133 KIF3CO14782 793 aa7.95□□□□□ -1.14
SGCB-203ENST00000514133 GTPBP6O43824 516 aaPredicted RBP7.95□□□□□ -1.14
SGCB-203ENST00000514133 TMC2Q8TDI7 906 aa7.95□□□□□ -1.14
SGCB-203ENST00000514133 HOXB3P14651 431 aaPredicted RBP7.94□□□□□ -1.14
SGCB-203ENST00000514133 HOXB1P14653 301 aaPredicted RBP7.93□□□□□ -1.14
SGCB-203ENST00000514133 TMEM92Q6UXU6 159 aa7.93□□□□□ -1.14
SGCB-203ENST00000514133 SLC34A2O95436 690 aa7.92□□□□□ -1.14
SGCB-203ENST00000514133 PPP1R37O75864 691 aa7.9□□□□□ -1.14
SGCB-203ENST00000514133 C2orf72A6NCS6 295 aa7.89□□□□□ -1.15
SGCB-203ENST00000514133 EMP3P54852 163 aa7.89□□□□□ -1.15
SGCB-203ENST00000514133 GPHNQ9NQX3 736 aaPredicted RBP7.89□□□□□ -1.15
SGCB-203ENST00000514133 FOXK1P85037 733 aa7.88□□□□□ -1.15
SGCB-203ENST00000514133 TULP1O00294 542 aaPredicted RBP7.87□□□□□ -1.15
SGCB-203ENST00000514133 PDE4AP27815 886 aa7.85□□□□□ -1.15
SGCB-203ENST00000514133 GPR153Q6NV75 609 aa7.85□□□□□ -1.15
SGCB-203ENST00000514133 CDAN1Q8IWY9 1227 aa7.85□□□□□ -1.15
SGCB-203ENST00000514133 TIMELESSQ9UNS1 1208 aa7.85□□□□□ -1.15
SGCB-203ENST00000514133 GTF3C3Q9Y5Q9 886 aa7.85□□□□□ -1.15
SGCB-203ENST00000514133 TBC1D12O60347 775 aa7.83□□□□□ -1.16
SGCB-203ENST00000514133 CRISPLD2Q9H0B8 497 aa7.83□□□□□ -1.16
SGCB-203ENST00000514133 MARVELD3Q96A59 401 aa7.82□□□□□ -1.16
SGCB-203ENST00000514133 ERBB3P21860 1342 aa7.81□□□□□ -1.16
SGCB-203ENST00000514133 PSDA5PKW4 1024 aaPredicted RBP7.81□□□□□ -1.16
SGCB-203ENST00000514133 PTCD2Q8WV60 388 aaKnown RBP7.81□□□□□ -1.16
SGCB-203ENST00000514133 HS3ST6Q96QI5 342 aa7.8□□□□□ -1.16
SGCB-203ENST00000514133 FAM205CA6NFA0 338 aa7.79□□□□□ -1.16
SGCB-203ENST00000514133 P3H3Q8IVL6 736 aa7.79□□□□□ -1.16
SGCB-203ENST00000514133 PLPP6Q8IY26 295 aa7.79□□□□□ -1.16
SGCB-203ENST00000514133 WDR70Q9NW82 654 aa7.78□□□□□ -1.16
SGCB-203ENST00000514133 PCDHGA4Q9Y5G9 962 aa7.78□□□□□ -1.16
SGCB-203ENST00000514133 DSG2Q14126 1118 aa7.77□□□□□ -1.17
SGCB-203ENST00000514133 ARSIQ5FYB1 569 aa7.77□□□□□ -1.17
SGCB-203ENST00000514133 ZNF316A6NFI3 1004 aaPredicted RBP7.76□□□□□ -1.17
SGCB-203ENST00000514133 MFSD10Q14728 455 aa7.76□□□□□ -1.17
SGCB-203ENST00000514133 ZNF687Q8N1G0 1237 aa7.76□□□□□ -1.17
SGCB-203ENST00000514133 TMEM132AQ24JP5 1023 aa7.75□□□□□ -1.17
SGCB-203ENST00000514133 PPP1R15BQ5SWA1 713 aa7.75□□□□□ -1.17
SGCB-203ENST00000514133 DDX27Q96GQ7 796 aaKnown RBP7.75□□□□□ -1.17
SGCB-203ENST00000514133 PBX2P40425 430 aa7.73□□□□□ -1.17
SGCB-203ENST00000514133 VARS2Q5ST30 1063 aaKnown RBP7.73□□□□□ -1.17
SGCB-203ENST00000514133 NCKAP5LQ9HCH0 1330 aa7.73□□□□□ -1.17
SGCB-203ENST00000514133 ERICH6Q7L0X2 663 aa7.72□□□□□ -1.17
SGCB-203ENST00000514133 OXER1Q8TDS5 423 aa7.72□□□□□ -1.17
SGCB-203ENST00000514133 LARP6Q9BRS8 491 aaKnown RBP7.72□□□□□ -1.17
SGCB-203ENST00000514133 KDM4FA0A1W2PPD8 638 aa7.71□□□□□ -1.18
SGCB-203ENST00000514133 CADPS2Q86UW7 1296 aa7.71□□□□□ -1.18
SGCB-203ENST00000514133 KCNV2Q8TDN2 545 aa7.71□□□□□ -1.18
SGCB-203ENST00000514133 POTEB3A0JP26 581 aa7.7□□□□□ -1.18
SGCB-203ENST00000514133 NUDT7P0C024 238 aa7.7□□□□□ -1.18
SGCB-203ENST00000514133 PTGER2P43116 358 aa7.7□□□□□ -1.18
SGCB-203ENST00000514133 LMOD2Q6P5Q4 547 aa7.7□□□□□ -1.18
SGCB-203ENST00000514133 POTEBQ6S5H4 581 aa7.7□□□□□ -1.18
SGCB-203ENST00000514133 PLSCR2Q9NRY7 297 aa7.7□□□□□ -1.18
SGCB-203ENST00000514133 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.69□□□□□ -1.18
SGCB-203ENST00000514133 KRTAP3-3Q9BYR6 98 aa7.68□□□□□ -1.18
SGCB-203ENST00000514133 KRTAP3-2Q9BYR7 98 aa7.68□□□□□ -1.18
SGCB-203ENST00000514133 LHX6Q9UPM6 363 aa7.68□□□□□ -1.18
SGCB-203ENST00000514133 ANO8Q9HCE9 1232 aaPredicted RBP7.67□□□□□ -1.18
SGCB-203ENST00000514133 CAMK2BQ13554 666 aa7.66□□□□□ -1.18
SGCB-203ENST00000514133 PPP4R3BQ5MIZ7 849 aa7.66□□□□□ -1.18
SGCB-203ENST00000514133 KHSRPQ92945 711 aaKnown RBP eCLIP7.66□□□□□ -1.18
SGCB-203ENST00000514133 SPNS2Q8IVW8 549 aa7.65□□□□□ -1.18
SGCB-203ENST00000514133 KCNH8Q96L42 1107 aa7.65□□□□□ -1.18
SGCB-203ENST00000514133 MAP3K9P80192 1104 aa7.64□□□□□ -1.19
SGCB-203ENST00000514133 C14orf37Q86TY3 774 aa7.64□□□□□ -1.19
SGCB-203ENST00000514133 ARHGAP33O14559 1287 aa7.62□□□□□ -1.19
SGCB-203ENST00000514133 ARXQ96QS3 562 aa7.62□□□□□ -1.19
SGCB-203ENST00000514133 ARIH1Q9Y4X5 557 aaPredicted RBP7.61□□□□□ -1.19
SGCB-203ENST00000514133 TK2O00142 265 aa7.6□□□□□ -1.19
SGCB-203ENST00000514133 EVI5O60447 810 aa7.6□□□□□ -1.19
SGCB-203ENST00000514133 LSM11P83369 360 aaKnown RBP eCLIP7.6□□□□□ -1.19
SGCB-203ENST00000514133 MMRN1Q13201 1228 aa7.6□□□□□ -1.19
SGCB-203ENST00000514133 UPF1Q92900 1129 aaKnown RBP eCLIP7.6□□□□□ -1.19
SGCB-203ENST00000514133 JPH4Q96JJ6 628 aa7.6□□□□□ -1.19
SGCB-203ENST00000514133 BRPF1P55201 1214 aaPredicted RBP7.59□□□□□ -1.19
SGCB-203ENST00000514133 ARHGEF1Q92888 912 aaKnown RBP7.59□□□□□ -1.19
SGCB-203ENST00000514133 SPDYE16A6NNV3 312 aaPredicted RBP7.58□□□□□ -1.2
SGCB-203ENST00000514133 FOSBP53539 338 aa7.58□□□□□ -1.2
SGCB-203ENST00000514133 E2F4Q16254 413 aa7.58□□□□□ -1.2
SGCB-203ENST00000514133 ZC3H15Q8WU90 426 aaKnown RBP7.58□□□□□ -1.2
SGCB-203ENST00000514133 BCL2L12Q9HB09 334 aa7.58□□□□□ -1.2
SGCB-203ENST00000514133 FBXW7Q969H0 707 aa7.57□□□□□ -1.2
SGCB-203ENST00000514133 SLC4A5Q9BY07 1137 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms