RNA–Protein interactions for RNA: ENST00000514118.5

AP3S1-207, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5

Gene AP3S1, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-207ENST00000514118 PREX2Q70Z35 1606 aa18.56■□□□□ 0.56
AP3S1-207ENST00000514118 POGZQ7Z3K3 1410 aa18.56■□□□□ 0.56
AP3S1-207ENST00000514118 VPS8Q8N3P4 1428 aa18.56■□□□□ 0.56
AP3S1-207ENST00000514118 SCAPERQ9BY12 1400 aa18.56■□□□□ 0.56
AP3S1-207ENST00000514118 MTUS2Q5JR59 1369 aa18.55■□□□□ 0.56
AP3S1-207ENST00000514118 CDC42BPBQ9Y5S2 1711 aa18.54■□□□□ 0.56
AP3S1-207ENST00000514118 ARHGEF40Q8TER5 1519 aa18.54■□□□□ 0.56
AP3S1-207ENST00000514118 EHBP1L1Q8N3D4 1523 aa18.53■□□□□ 0.56
AP3S1-207ENST00000514118 MAGI2Q86UL8 1455 aa18.52■□□□□ 0.55
AP3S1-207ENST00000514118 CDC42BPAQ5VT25 1732 aa18.52■□□□□ 0.55
AP3S1-207ENST00000514118 GPATCH8Q9UKJ3 1502 aaKnown RBP18.49■□□□□ 0.55
AP3S1-207ENST00000514118 ZNF518AQ6AHZ1 1483 aa18.49■□□□□ 0.55
AP3S1-207ENST00000514118 ABCC1P33527 1531 aa18.49■□□□□ 0.55
AP3S1-207ENST00000514118 ZFYVE16Q7Z3T8 1539 aa18.49■□□□□ 0.55
AP3S1-207ENST00000514118 KDM5CP41229 1560 aa18.47■□□□□ 0.55
AP3S1-207ENST00000514118 TIAM1Q13009 1591 aa18.47■□□□□ 0.55
AP3S1-207ENST00000514118 CCNB3Q8WWL7 1395 aa18.46■□□□□ 0.55
AP3S1-207ENST00000514118 YEATS2Q9ULM3 1422 aa18.46■□□□□ 0.55
AP3S1-207ENST00000514118 MAP3K1Q13233 1512 aa18.44■□□□□ 0.54
AP3S1-207ENST00000514118 ARHGEF12Q9NZN5 1544 aa18.44■□□□□ 0.54
AP3S1-207ENST00000514118 ITSN2Q9NZM3 1697 aa18.44■□□□□ 0.54
AP3S1-207ENST00000514118 SAMD9LQ8IVG5 1584 aa18.42■□□□□ 0.54
AP3S1-207ENST00000514118 TRAPPC8Q9Y2L5 1435 aa18.41■□□□□ 0.54
AP3S1-207ENST00000514118 AFAP1Q8N556 730 aa18.41■□□□□ 0.54
AP3S1-207ENST00000514118 CFDP1Q9UEE9 299 aaPredicted RBP18.41■□□□□ 0.54
AP3S1-207ENST00000514118 HECW2Q9P2P5 1572 aa18.41■□□□□ 0.54
AP3S1-207ENST00000514118 ADAMTSL3P82987 1691 aa18.41■□□□□ 0.54
AP3S1-207ENST00000514118 KIAA1107Q9UPP5 1409 aa18.4■□□□□ 0.54
AP3S1-207ENST00000514118 SUPT6HQ7KZ85 1726 aaKnown RBP18.4■□□□□ 0.54
AP3S1-207ENST00000514118 PLEKHH2Q8IVE3 1493 aa18.4■□□□□ 0.54
AP3S1-207ENST00000514118 BCORL1Q5H9F3 1711 aa18.4■□□□□ 0.54
AP3S1-207ENST00000514118 LRRC9Q6ZRR7 1453 aa18.39■□□□□ 0.54
AP3S1-207ENST00000514118 MLH3Q9UHC1 1453 aa18.39■□□□□ 0.54
AP3S1-207ENST00000514118 C9orf84Q5VXU9 1444 aa18.39■□□□□ 0.53
AP3S1-207ENST00000514118 ATP10AO60312 1499 aa18.39■□□□□ 0.53
AP3S1-207ENST00000514118 NCOA2Q15596 1464 aa18.39■□□□□ 0.53
AP3S1-207ENST00000514118 SYCP2Q9BX26 1530 aa18.39■□□□□ 0.53
AP3S1-207ENST00000514118 ZNF777Q9ULD5 760 aaPredicted RBP18.37■□□□□ 0.53
AP3S1-207ENST00000514118 ARID4BQ4LE39 1312 aaPredicted RBP18.37■□□□□ 0.53
AP3S1-207ENST00000514118 SIGLEC1Q9BZZ2 1709 aa18.36■□□□□ 0.53
AP3S1-207ENST00000514118 DIP2CQ9Y2E4 1556 aa18.35■□□□□ 0.53
AP3S1-207ENST00000514118 REREQ9P2R6 1566 aa18.34■□□□□ 0.53
AP3S1-207ENST00000514118 ABCA6Q8N139 1617 aa18.33■□□□□ 0.52
AP3S1-207ENST00000514118 KIDINS220Q9ULH0 1771 aa18.32■□□□□ 0.52
AP3S1-207ENST00000514118 KANK4Q5T7N3 995 aaPredicted RBP18.32■□□□□ 0.52
AP3S1-207ENST00000514118 MADDQ8WXG6 1647 aa18.31■□□□□ 0.52
AP3S1-207ENST00000514118 HNRNPMP52272 730 aaKnown RBP eCLIP18.31■□□□□ 0.52
AP3S1-207ENST00000514118 MYT1LQ9UL68 1186 aa18.3■□□□□ 0.52
AP3S1-207ENST00000514118 PTPRMP28827 1452 aa18.3■□□□□ 0.52
AP3S1-207ENST00000514118 MBD5Q9P267 1494 aa18.3■□□□□ 0.52
AP3S1-207ENST00000514118 ZNF644Q9H582 1327 aaPredicted RBP18.29■□□□□ 0.52
AP3S1-207ENST00000514118 SPAG9O60271 1321 aaKnown RBP18.28■□□□□ 0.52
AP3S1-207ENST00000514118 INO80Q9ULG1 1556 aaPredicted RBP18.28■□□□□ 0.52
AP3S1-207ENST00000514118 AGLP35573 1532 aa18.28■□□□□ 0.52
AP3S1-207ENST00000514118 CAMSAP2Q08AD1 1489 aa18.27■□□□□ 0.52
AP3S1-207ENST00000514118 APLP2Q06481 763 aa18.27■□□□□ 0.52
AP3S1-207ENST00000514118 ATP7AQ04656 1500 aa18.27■□□□□ 0.51
AP3S1-207ENST00000514118 RIMS1Q86UR5 1692 aaKnown RBP18.25■□□□□ 0.51
AP3S1-207ENST00000514118 MYOM3Q5VTT5 1437 aa18.24■□□□□ 0.51
AP3S1-207ENST00000514118 MIA2Q96PC5 1412 aa18.23■□□□□ 0.51
AP3S1-207ENST00000514118 CCDC141Q6ZP82 1450 aa18.23■□□□□ 0.51
AP3S1-207ENST00000514118 RTEL1-TNFRSF6BF6WH68 1400 aa18.23■□□□□ 0.51
AP3S1-207ENST00000514118 FER1L4A9Z1Z3 1794 aa18.22■□□□□ 0.51
AP3S1-207ENST00000514118 MLECQ14165 292 aa18.22■□□□□ 0.51
AP3S1-207ENST00000514118 RSPH4AQ5TD94 716 aa18.22■□□□□ 0.51
AP3S1-207ENST00000514118 ARHGEF5Q12774 1597 aa18.21■□□□□ 0.51
AP3S1-207ENST00000514118 PLXNC1O60486 1568 aa18.2■□□□□ 0.5
AP3S1-207ENST00000514118 A2MP01023 1474 aa18.19■□□□□ 0.5
AP3S1-207ENST00000514118 ADGBQ8N7X0 1667 aa18.17■□□□□ 0.5
AP3S1-207ENST00000514118 MAST1Q9Y2H9 1570 aa18.13■□□□□ 0.49
AP3S1-207ENST00000514118 DHX29Q7Z478 1369 aaKnown RBP18.12■□□□□ 0.49
AP3S1-207ENST00000514118 FGD6Q6ZV73 1430 aa18.12■□□□□ 0.49
AP3S1-207ENST00000514118 CNTLNQ9NXG0 1405 aa18.12■□□□□ 0.49
AP3S1-207ENST00000514118 TSPY4P0CV99 314 aa18.11■□□□□ 0.49
AP3S1-207ENST00000514118 TSPY10P0CW01 314 aa18.11■□□□□ 0.49
AP3S1-207ENST00000514118 TCOF1Q13428 1488 aaKnown RBP18.11■□□□□ 0.49
AP3S1-207ENST00000514118 PTPN23Q9H3S7 1636 aa18.11■□□□□ 0.49
AP3S1-207ENST00000514118 LMTK3Q96Q04 1460 aa18.08■□□□□ 0.49
AP3S1-207ENST00000514118 ESF1Q9H501 851 aaKnown RBP18.07■□□□□ 0.48
AP3S1-207ENST00000514118 SHANK2Q9UPX8 1470 aa18.07■□□□□ 0.48
AP3S1-207ENST00000514118 MROH2AA6NES4 1674 aa18.06■□□□□ 0.48
AP3S1-207ENST00000514118 PPP6R1Q9UPN7 881 aa18.06■□□□□ 0.48
AP3S1-207ENST00000514118 CEBPAP49715 358 aaPredicted RBP18.05■□□□□ 0.48
AP3S1-207ENST00000514118 PLPPR3Q6T4P5 718 aa18.05■□□□□ 0.48
AP3S1-207ENST00000514118 C3P01024 1663 aa18.05■□□□□ 0.48
AP3S1-207ENST00000514118 ABCC5O15440 1437 aa18.05■□□□□ 0.48
AP3S1-207ENST00000514118 CROCC2H7BZ55 1655 aa18.04■□□□□ 0.48
AP3S1-207ENST00000514118 DNMT1P26358 1616 aaKnown RBP18.04■□□□□ 0.48
AP3S1-207ENST00000514118 SETD1BQ9UPS6 1966 aaKnown RBP18.04■□□□□ 0.48
AP3S1-207ENST00000514118 DAPK1P53355 1430 aa18.03■□□□□ 0.48
AP3S1-207ENST00000514118 FAM135AQ9P2D6 1515 aa18.03■□□□□ 0.48
AP3S1-207ENST00000514118 GGT6Q6P531 493 aa18.02■□□□□ 0.48
AP3S1-207ENST00000514118 KIF3BO15066 747 aa18.01■□□□□ 0.47
AP3S1-207ENST00000514118 PREX1Q8TCU6 1659 aa18.01■□□□□ 0.47
AP3S1-207ENST00000514118 ZMYM3Q14202 1370 aa18.01■□□□□ 0.47
AP3S1-207ENST00000514118 CLTCQ00610 1675 aaKnown RBP17.99■□□□□ 0.47
AP3S1-207ENST00000514118 NPATQ14207 1427 aa17.99■□□□□ 0.47
AP3S1-207ENST00000514118 EIF2AK4Q9P2K8 1649 aaKnown RBP17.99■□□□□ 0.47
AP3S1-207ENST00000514118 DUOX2Q9NRD8 1548 aa17.98■□□□□ 0.47
AP3S1-207ENST00000514118 RNF17Q9BXT8 1623 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms