RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 FANCAO15360 1455 aa17.63■□□□□ 0.41
HTT-213ENST00000513806 ZNF777Q9ULD5 760 aaPredicted RBP17.62■□□□□ 0.41
HTT-213ENST00000513806 TEX14Q8IWB6 1497 aa17.62■□□□□ 0.41
HTT-213ENST00000513806 SAMD9LQ8IVG5 1584 aa17.62■□□□□ 0.41
HTT-213ENST00000513806 CFAP74Q9C0B2 1584 aa17.61■□□□□ 0.41
HTT-213ENST00000513806 COL17A1Q9UMD9 1497 aaPredicted RBP17.59■□□□□ 0.41
HTT-213ENST00000513806 ZNF644Q9H582 1327 aaPredicted RBP17.59■□□□□ 0.41
HTT-213ENST00000513806 KDM6BO15054 1643 aa17.58■□□□□ 0.41
HTT-213ENST00000513806 ARAP3Q8WWN8 1544 aa17.58■□□□□ 0.41
HTT-213ENST00000513806 AKNAQ7Z591 1439 aa17.58■□□□□ 0.41
HTT-213ENST00000513806 CFDP1Q9UEE9 299 aaPredicted RBP17.58■□□□□ 0.4
HTT-213ENST00000513806 MYOM3Q5VTT5 1437 aa17.57■□□□□ 0.4
HTT-213ENST00000513806 NEO1Q92859 1461 aa17.56■□□□□ 0.4
HTT-213ENST00000513806 EFCAB2Q5VUJ9 269 aa17.56■□□□□ 0.4
HTT-213ENST00000513806 ARHGEF12Q9NZN5 1544 aa17.56■□□□□ 0.4
HTT-213ENST00000513806 ABCC1P33527 1531 aa17.55■□□□□ 0.4
HTT-213ENST00000513806 ADGRL1O94910 1474 aa17.55■□□□□ 0.4
HTT-213ENST00000513806 PTPN23Q9H3S7 1636 aa17.54■□□□□ 0.4
HTT-213ENST00000513806 FRMPD1Q5SYB0 1578 aa17.54■□□□□ 0.4
HTT-213ENST00000513806 SYCP2Q9BX26 1530 aa17.54■□□□□ 0.4
HTT-213ENST00000513806 RICTORQ6R327 1708 aa17.54■□□□□ 0.4
HTT-213ENST00000513806 CAMSAP2Q08AD1 1489 aa17.54■□□□□ 0.4
HTT-213ENST00000513806 SCAPERQ9BY12 1400 aa17.53■□□□□ 0.4
HTT-213ENST00000513806 RAPGEF3O95398 923 aa17.52■□□□□ 0.4
HTT-213ENST00000513806 HNRNPMP52272 730 aaKnown RBP eCLIP17.51■□□□□ 0.39
HTT-213ENST00000513806 FGD6Q6ZV73 1430 aa17.51■□□□□ 0.39
HTT-213ENST00000513806 TRAPPC8Q9Y2L5 1435 aa17.49■□□□□ 0.39
HTT-213ENST00000513806 DENND4BO75064 1496 aaPredicted RBP17.48■□□□□ 0.39
HTT-213ENST00000513806 MIA2Q96PC5 1412 aa17.47■□□□□ 0.39
HTT-213ENST00000513806 AFAP1Q8N556 730 aa17.46■□□□□ 0.39
HTT-213ENST00000513806 POGZQ7Z3K3 1410 aa17.46■□□□□ 0.39
HTT-213ENST00000513806 FAM50AQ14320 339 aaKnown RBP17.45■□□□□ 0.38
HTT-213ENST00000513806 MBD5Q9P267 1494 aa17.44■□□□□ 0.38
HTT-213ENST00000513806 TCOF1Q13428 1488 aaKnown RBP17.44■□□□□ 0.38
HTT-213ENST00000513806 PLEKHH2Q8IVE3 1493 aa17.42■□□□□ 0.38
HTT-213ENST00000513806 CROCC2H7BZ55 1655 aa17.42■□□□□ 0.38
HTT-213ENST00000513806 KDM5CP41229 1560 aa17.41■□□□□ 0.38
HTT-213ENST00000513806 KIAA1107Q9UPP5 1409 aa17.41■□□□□ 0.38
HTT-213ENST00000513806 ARHGEF5Q12774 1597 aa17.4■□□□□ 0.38
HTT-213ENST00000513806 KIDINS220Q9ULH0 1771 aa17.4■□□□□ 0.38
HTT-213ENST00000513806 ZNF518AQ6AHZ1 1483 aa17.4■□□□□ 0.38
HTT-213ENST00000513806 DNMT1P26358 1616 aaKnown RBP17.39■□□□□ 0.38
HTT-213ENST00000513806 CCDC141Q6ZP82 1450 aa17.39■□□□□ 0.37
HTT-213ENST00000513806 ZMYM4Q5VZL5 1548 aa17.39■□□□□ 0.37
HTT-213ENST00000513806 HECW2Q9P2P5 1572 aa17.39■□□□□ 0.37
HTT-213ENST00000513806 RRBP1Q9P2E9 1410 aaKnown RBP17.38■□□□□ 0.37
HTT-213ENST00000513806 YEATS2Q9ULM3 1422 aa17.38■□□□□ 0.37
HTT-213ENST00000513806 ITGAEP38570 1179 aa17.38■□□□□ 0.37
HTT-213ENST00000513806 MYT1LQ9UL68 1186 aa17.38■□□□□ 0.37
HTT-213ENST00000513806 ABCA6Q8N139 1617 aa17.38■□□□□ 0.37
HTT-213ENST00000513806 INO80Q9ULG1 1556 aaPredicted RBP17.37■□□□□ 0.37
HTT-213ENST00000513806 SIGLEC1Q9BZZ2 1709 aa17.37■□□□□ 0.37
HTT-213ENST00000513806 ABCC5O15440 1437 aa17.37■□□□□ 0.37
HTT-213ENST00000513806 DAPK1P53355 1430 aa17.36■□□□□ 0.37
HTT-213ENST00000513806 ZFYVE16Q7Z3T8 1539 aa17.36■□□□□ 0.37
HTT-213ENST00000513806 ATP7AQ04656 1500 aa17.35■□□□□ 0.37
HTT-213ENST00000513806 SPAG9O60271 1321 aaKnown RBP17.34■□□□□ 0.37
HTT-213ENST00000513806 PTPRKQ15262 1439 aa17.34■□□□□ 0.37
HTT-213ENST00000513806 ADGBQ8N7X0 1667 aa17.34■□□□□ 0.37
HTT-213ENST00000513806 ARHGEF40Q8TER5 1519 aa17.34■□□□□ 0.37
HTT-213ENST00000513806 CHIC2Q9UKJ5 165 aa17.34■□□□□ 0.37
HTT-213ENST00000513806 DIP2CQ9Y2E4 1556 aa17.34■□□□□ 0.37
HTT-213ENST00000513806 MLH3Q9UHC1 1453 aa17.31■□□□□ 0.36
HTT-213ENST00000513806 C9orf84Q5VXU9 1444 aa17.31■□□□□ 0.36
HTT-213ENST00000513806 MAST1Q9Y2H9 1570 aa17.31■□□□□ 0.36
HTT-213ENST00000513806 TSPY4P0CV99 314 aa17.28■□□□□ 0.36
HTT-213ENST00000513806 TSPY10P0CW01 314 aa17.28■□□□□ 0.36
HTT-213ENST00000513806 MAGI2Q86UL8 1455 aa17.27■□□□□ 0.36
HTT-213ENST00000513806 SHANK2Q9UPX8 1470 aa17.27■□□□□ 0.36
HTT-213ENST00000513806 RSPH4AQ5TD94 716 aa17.26■□□□□ 0.35
HTT-213ENST00000513806 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.26■□□□□ 0.35
HTT-213ENST00000513806 PLXNC1O60486 1568 aa17.25■□□□□ 0.35
HTT-213ENST00000513806 RRP7BPQ9NSQ0 103 aa17.25■□□□□ 0.35
HTT-213ENST00000513806 ATP10AO60312 1499 aa17.24■□□□□ 0.35
HTT-213ENST00000513806 RTEL1-TNFRSF6BF6WH68 1400 aa17.24■□□□□ 0.35
HTT-213ENST00000513806 ADGRL2O95490 1459 aa17.21■□□□□ 0.35
HTT-213ENST00000513806 A2MP01023 1474 aa17.21■□□□□ 0.35
HTT-213ENST00000513806 KIF15Q9NS87 1388 aa17.2■□□□□ 0.34
HTT-213ENST00000513806 NCOA1Q15788 1441 aa17.2■□□□□ 0.34
HTT-213ENST00000513806 ARID4BQ4LE39 1312 aaPredicted RBP17.2■□□□□ 0.34
HTT-213ENST00000513806 MLECQ14165 292 aa17.19■□□□□ 0.34
HTT-213ENST00000513806 ANKRD30AQ9BXX3 1397 aa17.18■□□□□ 0.34
HTT-213ENST00000513806 REREQ9P2R6 1566 aa17.18■□□□□ 0.34
HTT-213ENST00000513806 BCORL1Q5H9F3 1711 aa17.17■□□□□ 0.34
HTT-213ENST00000513806 DUOX2Q9NRD8 1548 aa17.16■□□□□ 0.34
HTT-213ENST00000513806 GCC2Q8IWJ2 1684 aa17.16■□□□□ 0.34
HTT-213ENST00000513806 DHX29Q7Z478 1369 aaKnown RBP17.15■□□□□ 0.34
HTT-213ENST00000513806 ROCK1Q13464 1354 aa17.14■□□□□ 0.33
HTT-213ENST00000513806 AGLP35573 1532 aa17.12■□□□□ 0.33
HTT-213ENST00000513806 KIF3BO15066 747 aa17.12■□□□□ 0.33
HTT-213ENST00000513806 FER1L4A9Z1Z3 1794 aa17.12■□□□□ 0.33
HTT-213ENST00000513806 MADDQ8WXG6 1647 aa17.11■□□□□ 0.33
HTT-213ENST00000513806 EIF2AK4Q9P2K8 1649 aaKnown RBP17.11■□□□□ 0.33
HTT-213ENST00000513806 NAIPQ13075 1403 aa17.11■□□□□ 0.33
HTT-213ENST00000513806 GGT6Q6P531 493 aa17.1■□□□□ 0.33
HTT-213ENST00000513806 ANKRD50Q9ULJ7 1429 aa17.1■□□□□ 0.33
HTT-213ENST00000513806 MROH1Q8NDA8 1641 aa17.1■□□□□ 0.33
HTT-213ENST00000513806 ADAMTSL3P82987 1691 aa17.1■□□□□ 0.33
HTT-213ENST00000513806 RIMS1Q86UR5 1692 aaKnown RBP17.1■□□□□ 0.33
HTT-213ENST00000513806 CEP152O94986 1710 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms