RNA–Protein interactions for RNA: ENST00000513793.5

LINC02428-203, Transcript of long intergenic non-protein coding RNA 2428, humanhuman

TSL 5 BASIC

Gene LINC02428, Length 438 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02428-203ENST00000513793 PREX2Q70Z35 1606 aa13.06□□□□□ -0.32
LINC02428-203ENST00000513793 SIGLEC1Q9BZZ2 1709 aa13.05□□□□□ -0.32
LINC02428-203ENST00000513793 DENND4BO75064 1496 aaPredicted RBP13.05□□□□□ -0.32
LINC02428-203ENST00000513793 PHLDB1Q86UU1 1377 aa13.05□□□□□ -0.32
LINC02428-203ENST00000513793 SCAPERQ9BY12 1400 aa13.05□□□□□ -0.32
LINC02428-203ENST00000513793 EFCAB2Q5VUJ9 269 aa13.03□□□□□ -0.32
LINC02428-203ENST00000513793 PLPPR3Q6T4P5 718 aa13.02□□□□□ -0.33
LINC02428-203ENST00000513793 MTUS2Q5JR59 1369 aa13.02□□□□□ -0.33
LINC02428-203ENST00000513793 VPS8Q8N3P4 1428 aa13.02□□□□□ -0.33
LINC02428-203ENST00000513793 YEATS2Q9ULM3 1422 aa13.02□□□□□ -0.33
LINC02428-203ENST00000513793 ARHGEF12Q9NZN5 1544 aa13.02□□□□□ -0.33
LINC02428-203ENST00000513793 ZNF777Q9ULD5 760 aaPredicted RBP13.01□□□□□ -0.33
LINC02428-203ENST00000513793 ITSN2Q9NZM3 1697 aa13□□□□□ -0.33
LINC02428-203ENST00000513793 TIAM1Q13009 1591 aa13□□□□□ -0.33
LINC02428-203ENST00000513793 ARHGEF40Q8TER5 1519 aa13□□□□□ -0.33
LINC02428-203ENST00000513793 GPATCH8Q9UKJ3 1502 aaKnown RBP13□□□□□ -0.33
LINC02428-203ENST00000513793 POGZQ7Z3K3 1410 aa13□□□□□ -0.33
LINC02428-203ENST00000513793 SAMD9LQ8IVG5 1584 aa12.99□□□□□ -0.33
LINC02428-203ENST00000513793 AFAP1Q8N556 730 aa12.99□□□□□ -0.33
LINC02428-203ENST00000513793 ZMYM4Q5VZL5 1548 aa12.98□□□□□ -0.33
LINC02428-203ENST00000513793 EHBP1L1Q8N3D4 1523 aa12.98□□□□□ -0.33
LINC02428-203ENST00000513793 TRAPPC8Q9Y2L5 1435 aa12.98□□□□□ -0.33
LINC02428-203ENST00000513793 ABCC1P33527 1531 aa12.98□□□□□ -0.33
LINC02428-203ENST00000513793 ZFYVE16Q7Z3T8 1539 aa12.98□□□□□ -0.33
LINC02428-203ENST00000513793 KANK4Q5T7N3 995 aaPredicted RBP12.97□□□□□ -0.33
LINC02428-203ENST00000513793 ARID4BQ4LE39 1312 aaPredicted RBP12.96□□□□□ -0.33
LINC02428-203ENST00000513793 ZNF644Q9H582 1327 aaPredicted RBP12.96□□□□□ -0.33
LINC02428-203ENST00000513793 CCNB3Q8WWL7 1395 aa12.95□□□□□ -0.34
LINC02428-203ENST00000513793 SYCP2Q9BX26 1530 aa12.95□□□□□ -0.34
LINC02428-203ENST00000513793 HNRNPMP52272 730 aaKnown RBP eCLIP12.95□□□□□ -0.344e-7■■■■□ 22.7
LINC02428-203ENST00000513793 BCORL1Q5H9F3 1711 aa12.95□□□□□ -0.34
LINC02428-203ENST00000513793 SUPT6HQ7KZ85 1726 aaKnown RBP12.95□□□□□ -0.34
LINC02428-203ENST00000513793 ADAMTSL3P82987 1691 aa12.94□□□□□ -0.34
LINC02428-203ENST00000513793 FOXD1Q16676 465 aa12.94□□□□□ -0.34
LINC02428-203ENST00000513793 KDM5CP41229 1560 aa12.94□□□□□ -0.34
LINC02428-203ENST00000513793 NCOA2Q15596 1464 aa12.93□□□□□ -0.34
LINC02428-203ENST00000513793 LRRC9Q6ZRR7 1453 aa12.93□□□□□ -0.34
LINC02428-203ENST00000513793 ABCA6Q8N139 1617 aa12.93□□□□□ -0.34
LINC02428-203ENST00000513793 MADDQ8WXG6 1647 aa12.93□□□□□ -0.34
LINC02428-203ENST00000513793 MLECQ14165 292 aa12.93□□□□□ -0.34
LINC02428-203ENST00000513793 CFDP1Q9UEE9 299 aaPredicted RBP12.93□□□□□ -0.34
LINC02428-203ENST00000513793 MYT1LQ9UL68 1186 aa12.93□□□□□ -0.34
LINC02428-203ENST00000513793 KIDINS220Q9ULH0 1771 aa12.93□□□□□ -0.34
LINC02428-203ENST00000513793 HECW2Q9P2P5 1572 aa12.93□□□□□ -0.34
LINC02428-203ENST00000513793 ZNF518AQ6AHZ1 1483 aa12.92□□□□□ -0.34
LINC02428-203ENST00000513793 DIP2CQ9Y2E4 1556 aa12.91□□□□□ -0.34
LINC02428-203ENST00000513793 RIMS1Q86UR5 1692 aaKnown RBP12.91□□□□□ -0.34
LINC02428-203ENST00000513793 ATP10AO60312 1499 aa12.9□□□□□ -0.34
LINC02428-203ENST00000513793 MAGI2Q86UL8 1455 aa12.9□□□□□ -0.34
LINC02428-203ENST00000513793 FER1L4A9Z1Z3 1794 aa12.87□□□□□ -0.35
LINC02428-203ENST00000513793 CAMSAP2Q08AD1 1489 aa12.86□□□□□ -0.35
LINC02428-203ENST00000513793 MLH3Q9UHC1 1453 aa12.86□□□□□ -0.35
LINC02428-203ENST00000513793 MAP3K1Q13233 1512 aa12.86□□□□□ -0.35
LINC02428-203ENST00000513793 C9orf84Q5VXU9 1444 aa12.86□□□□□ -0.35
LINC02428-203ENST00000513793 PTPRMP28827 1452 aa12.85□□□□□ -0.35
LINC02428-203ENST00000513793 INO80Q9ULG1 1556 aaPredicted RBP12.85□□□□□ -0.35
LINC02428-203ENST00000513793 MBD5Q9P267 1494 aa12.85□□□□□ -0.35
LINC02428-203ENST00000513793 ATP7AQ04656 1500 aa12.84□□□□□ -0.35
LINC02428-203ENST00000513793 SPAG9O60271 1321 aaKnown RBP12.84□□□□□ -0.35
LINC02428-203ENST00000513793 KIAA1107Q9UPP5 1409 aa12.83□□□□□ -0.36
LINC02428-203ENST00000513793 PPARGC1BQ86YN6 1023 aaKnown RBP12.83□□□□□ -0.36
LINC02428-203ENST00000513793 PLEKHH2Q8IVE3 1493 aa12.83□□□□□ -0.36
LINC02428-203ENST00000513793 APLP2Q06481 763 aa12.82□□□□□ -0.36
LINC02428-203ENST00000513793 ADGBQ8N7X0 1667 aa12.82□□□□□ -0.36
LINC02428-203ENST00000513793 CEBPAP49715 358 aaPredicted RBP12.8□□□□□ -0.36
LINC02428-203ENST00000513793 REREQ9P2R6 1566 aa12.8□□□□□ -0.36
LINC02428-203ENST00000513793 MYOM3Q5VTT5 1437 aa12.79□□□□□ -0.36
LINC02428-203ENST00000513793 CCDC141Q6ZP82 1450 aa12.78□□□□□ -0.36
LINC02428-203ENST00000513793 A2MP01023 1474 aa12.77□□□□□ -0.37
LINC02428-203ENST00000513793 AGLP35573 1532 aa12.77□□□□□ -0.37
LINC02428-203ENST00000513793 PLXNC1O60486 1568 aa12.77□□□□□ -0.37
LINC02428-203ENST00000513793 ARHGEF5Q12774 1597 aa12.77□□□□□ -0.37
LINC02428-203ENST00000513793 PTPN23Q9H3S7 1636 aa12.77□□□□□ -0.37
LINC02428-203ENST00000513793 C3P01024 1663 aa12.76□□□□□ -0.37
LINC02428-203ENST00000513793 CLTCQ00610 1675 aaKnown RBP12.74□□□□□ -0.37
LINC02428-203ENST00000513793 CROCC2H7BZ55 1655 aa12.73□□□□□ -0.37
LINC02428-203ENST00000513793 FGD6Q6ZV73 1430 aa12.72□□□□□ -0.37
LINC02428-203ENST00000513793 MIA2Q96PC5 1412 aa12.72□□□□□ -0.37
LINC02428-203ENST00000513793 HSPA2P54652 639 aa12.72□□□□□ -0.37
LINC02428-203ENST00000513793 GGT6Q6P531 493 aa12.72□□□□□ -0.37
LINC02428-203ENST00000513793 LMTK3Q96Q04 1460 aa12.72□□□□□ -0.37
LINC02428-203ENST00000513793 RTEL1-TNFRSF6BF6WH68 1400 aa12.71□□□□□ -0.37
LINC02428-203ENST00000513793 ABCC5O15440 1437 aa12.7□□□□□ -0.38
LINC02428-203ENST00000513793 MAST1Q9Y2H9 1570 aa12.69□□□□□ -0.38
LINC02428-203ENST00000513793 KIF3BO15066 747 aa12.69□□□□□ -0.38
LINC02428-203ENST00000513793 TSPY4P0CV99 314 aa12.69□□□□□ -0.38
LINC02428-203ENST00000513793 TSPY10P0CW01 314 aa12.69□□□□□ -0.38
LINC02428-203ENST00000513793 CHIC2Q9UKJ5 165 aa12.69□□□□□ -0.38
LINC02428-203ENST00000513793 DNMT1P26358 1616 aaKnown RBP12.69□□□□□ -0.38
LINC02428-203ENST00000513793 DHX29Q7Z478 1369 aaKnown RBP12.69□□□□□ -0.38
LINC02428-203ENST00000513793 TCOF1Q13428 1488 aaKnown RBP12.68□□□□□ -0.38
LINC02428-203ENST00000513793 FAM50AQ14320 339 aaKnown RBP12.68□□□□□ -0.38
LINC02428-203ENST00000513793 PREX1Q8TCU6 1659 aa12.67□□□□□ -0.38
LINC02428-203ENST00000513793 RSPH4AQ5TD94 716 aa12.67□□□□□ -0.38
LINC02428-203ENST00000513793 ESF1Q9H501 851 aaKnown RBP12.67□□□□□ -0.38
LINC02428-203ENST00000513793 DAPK1P53355 1430 aa12.67□□□□□ -0.38
LINC02428-203ENST00000513793 MROH2AA6NES4 1674 aa12.67□□□□□ -0.38
LINC02428-203ENST00000513793 RRP7BPQ9NSQ0 103 aa12.66□□□□□ -0.38
LINC02428-203ENST00000513793 CFAP65Q6ZU64 1925 aaKnown RBP12.66□□□□□ -0.38
LINC02428-203ENST00000513793 ZMYM3Q14202 1370 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms