RNA–Protein interactions for RNA: ENST00000513720.5

AFP-205, Transcript of alpha fetoprotein, humanhuman

TSL 1 (best)

Gene AFP, Length 197 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-205ENST00000513720 HDAC5Q9UQL6 1122 aa5.28□□□□□ -1.56
AFP-205ENST00000513720 FANCIQ9NVI1 1328 aa5.26□□□□□ -1.57
AFP-205ENST00000513720 BRPF1P55201 1214 aaPredicted RBP5.26□□□□□ -1.57
AFP-205ENST00000513720 ARID3CA6NKF2 412 aa5.25□□□□□ -1.57
AFP-205ENST00000513720 TRHP20396 242 aaPredicted RBP5.25□□□□□ -1.57
AFP-205ENST00000513720 MFAP1P55081 439 aaKnown RBP5.25□□□□□ -1.57
AFP-205ENST00000513720 CASC1Q6TDU7 716 aa5.25□□□□□ -1.57
AFP-205ENST00000513720 CEP120Q8N960 986 aa5.25□□□□□ -1.57
AFP-205ENST00000513720 MMP14P50281 582 aa5.24□□□□□ -1.57
AFP-205ENST00000513720 NEUROD2Q15784 382 aa5.24□□□□□ -1.57
AFP-205ENST00000513720 CC2D1BQ5T0F9 858 aaKnown RBP5.24□□□□□ -1.57
AFP-205ENST00000513720 NOL8Q76FK4 1167 aaKnown RBP5.24□□□□□ -1.57
AFP-205ENST00000513720 TMTC2Q8N394 836 aa5.24□□□□□ -1.57
AFP-205ENST00000513720 C1orf115Q9H7X2 142 aa5.24□□□□□ -1.57
AFP-205ENST00000513720 RBM19Q9Y4C8 960 aaKnown RBP5.24□□□□□ -1.57
AFP-205ENST00000513720 TTC36A6NLP5 189 aa5.23□□□□□ -1.57
AFP-205ENST00000513720 C11orf95C9JLR9 678 aaPredicted RBP5.23□□□□□ -1.57
AFP-205ENST00000513720 NPM3O75607 178 aaKnown RBP5.23□□□□□ -1.57
AFP-205ENST00000513720 TNNT2P45379 298 aaPredicted RBP5.23□□□□□ -1.57
AFP-205ENST00000513720 SPTY2D1Q68D10 685 aaPredicted RBP5.23□□□□□ -1.57
AFP-205ENST00000513720 CENPJQ9HC77 1338 aaPredicted RBP5.23□□□□□ -1.57
AFP-205ENST00000513720 ZNF316A6NFI3 1004 aaPredicted RBP5.22□□□□□ -1.57
AFP-205ENST00000513720 APBB1O00213 710 aa5.22□□□□□ -1.57
AFP-205ENST00000513720 NBPF20Q3BBV1 942 aa5.22□□□□□ -1.57
AFP-205ENST00000513720 NBPF11Q86T75 865 aa5.22□□□□□ -1.57
AFP-205ENST00000513720 PLCD3Q8N3E9 789 aa5.22□□□□□ -1.57
AFP-205ENST00000513720 SPRYD3Q8NCJ5 442 aa5.22□□□□□ -1.57
AFP-205ENST00000513720 SUPT16HQ9Y5B9 1047 aaKnown RBP5.22□□□□□ -1.57
AFP-205ENST00000513720 SOX12O15370 315 aa5.21□□□□□ -1.58
AFP-205ENST00000513720 NBPF1Q3BBV0 1214 aa5.21□□□□□ -1.58
AFP-205ENST00000513720 TAF3Q5VWG9 929 aa5.21□□□□□ -1.58
AFP-205ENST00000513720 FAM43AQ8N2R8 423 aa5.21□□□□□ -1.58
AFP-205ENST00000513720 DCAF1Q9Y4B6 1507 aa5.21□□□□□ -1.58
AFP-205ENST00000513720 LOC102724159A0A0B4J2E5 919 aa5.2□□□□□ -1.58
AFP-205ENST00000513720 HMGB1P1B2RPK0 211 aaPredicted RBP5.2□□□□□ -1.58
AFP-205ENST00000513720 ANP32CO43423 234 aa5.2□□□□□ -1.58
AFP-205ENST00000513720 NRDCO43847 1150 aa5.2□□□□□ -1.58
AFP-205ENST00000513720 PWP2Q15269 919 aaKnown RBP5.2□□□□□ -1.58
AFP-205ENST00000513720 FOXD4L6Q3SYB3 417 aaPredicted RBP5.2□□□□□ -1.58
AFP-205ENST00000513720 FOXD4L3Q6VB84 417 aaPredicted RBP5.2□□□□□ -1.58
AFP-205ENST00000513720 CCDC125Q86Z20 511 aa5.2□□□□□ -1.58
AFP-205ENST00000513720 GZF1Q9H116 711 aaPredicted RBP5.2□□□□□ -1.58
AFP-205ENST00000513720 MYH16Q9H6N6 1097 aa5.2□□□□□ -1.58
AFP-205ENST00000513720 PRDM4Q9UKN5 801 aa5.2□□□□□ -1.58
AFP-205ENST00000513720 CALRP27797 417 aaKnown RBP5.19□□□□□ -1.58
AFP-205ENST00000513720 RGS3P49796 1198 aa5.19□□□□□ -1.58
AFP-205ENST00000513720 GORABQ5T7V8 394 aa5.19□□□□□ -1.58
AFP-205ENST00000513720 DIEXFQ68CQ4 756 aaKnown RBP5.19□□□□□ -1.58
AFP-205ENST00000513720 RIPOR2Q9Y4F9 1068 aa5.19□□□□□ -1.58
AFP-205ENST00000513720 RINLQ6ZS11 566 aa5.18□□□□□ -1.58
AFP-205ENST00000513720 ANKRD13AQ8IZ07 590 aa5.18□□□□□ -1.58
AFP-205ENST00000513720 ZNF830Q96NB3 372 aaPredicted RBP5.18□□□□□ -1.58
AFP-205ENST00000513720 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.18□□□□□ -1.58
AFP-205ENST00000513720 GOLIM4O00461 696 aa5.17□□□□□ -1.58
AFP-205ENST00000513720 TCERG1O14776 1098 aaKnown RBP5.17□□□□□ -1.58
AFP-205ENST00000513720 ADRA2BP18089 450 aa5.17□□□□□ -1.58
AFP-205ENST00000513720 SSR1P43307 286 aaKnown RBP5.17□□□□□ -1.58
AFP-205ENST00000513720 HSP90AB3PQ58FF7 597 aa5.17□□□□□ -1.58
AFP-205ENST00000513720 CCDC180Q9P1Z9 1646 aa5.16□□□□□ -1.58
AFP-205ENST00000513720 MSH5O43196 834 aa5.16□□□□□ -1.58
AFP-205ENST00000513720 DNTTIP2Q5QJE6 756 aaKnown RBP5.16□□□□□ -1.58
AFP-205ENST00000513720 TSHZ1Q6ZSZ6 1077 aa5.16□□□□□ -1.58
AFP-205ENST00000513720 PDCL3Q9H2J4 239 aa5.16□□□□□ -1.58
AFP-205ENST00000513720 TPD52L2O43399 206 aaKnown RBP5.15□□□□□ -1.59
AFP-205ENST00000513720 MYCNP04198 464 aaPredicted RBP5.15□□□□□ -1.59
AFP-205ENST00000513720 RALBP1Q15311 655 aa5.15□□□□□ -1.59
AFP-205ENST00000513720 FOXD1Q16676 465 aa5.15□□□□□ -1.59
AFP-205ENST00000513720 NBPF9Q3BBW0 867 aa5.15□□□□□ -1.59
AFP-205ENST00000513720 RBM26Q5T8P6 1007 aaKnown RBP5.15□□□□□ -1.59
AFP-205ENST00000513720 FOXD4L1Q9NU39 408 aa5.15□□□□□ -1.59
AFP-205ENST00000513720 TERF2IPQ9NYB0 399 aa5.15□□□□□ -1.59
AFP-205ENST00000513720 SH3BP1Q9Y3L3 701 aa5.15□□□□□ -1.59
AFP-205ENST00000513720 BRD1O95696 1058 aa5.14□□□□□ -1.59
AFP-205ENST00000513720 ERCC3P19447 782 aa5.14□□□□□ -1.59
AFP-205ENST00000513720 ARID4AP29374 1257 aaPredicted RBP5.14□□□□□ -1.59
AFP-205ENST00000513720 MAPK8IP2Q13387 824 aaPredicted RBP5.14□□□□□ -1.59
AFP-205ENST00000513720 HDAC1Q13547 482 aaPredicted RBP5.14□□□□□ -1.59
AFP-205ENST00000513720 PIAS4Q8N2W9 510 aaPredicted RBP5.14□□□□□ -1.59
AFP-205ENST00000513720 FBXW7Q969H0 707 aa5.14□□□□□ -1.59
AFP-205ENST00000513720 SGSM3Q96HU1 749 aa5.14□□□□□ -1.59
AFP-205ENST00000513720 TRAIPQ9BWF2 469 aa5.14□□□□□ -1.59
AFP-205ENST00000513720 SMARCA5O60264 1052 aaPredicted RBP5.13□□□□□ -1.59
AFP-205ENST00000513720 MARCH6O60337 910 aa5.13□□□□□ -1.59
AFP-205ENST00000513720 WDR78Q5VTH9 848 aa5.13□□□□□ -1.59
AFP-205ENST00000513720 ARMCX6Q7L4S7 300 aa5.13□□□□□ -1.59
AFP-205ENST00000513720 EGFL6Q8IUX8 553 aa5.13□□□□□ -1.59
AFP-205ENST00000513720 SMAP1Q8IYB5 467 aaPredicted RBP5.13□□□□□ -1.59
AFP-205ENST00000513720 CARD10Q9BWT7 1032 aa5.13□□□□□ -1.59
AFP-205ENST00000513720 TMEM51Q9NW97 253 aa5.13□□□□□ -1.59
AFP-205ENST00000513720 NOP58Q9Y2X3 529 aaKnown RBP5.13□□□□□ -1.59
AFP-205ENST00000513720 CADPSQ9ULU8 1353 aa5.13□□□□□ -1.59
AFP-205ENST00000513720 PSEN1P49768 467 aa5.12□□□□□ -1.59
AFP-205ENST00000513720 APBB1IPQ7Z5R6 666 aaPredicted RBP5.12□□□□□ -1.59
AFP-205ENST00000513720 CCDC82Q8N4S0 544 aa5.12□□□□□ -1.59
AFP-205ENST00000513720 OTUD6BQ8N6M0 293 aa5.12□□□□□ -1.59
AFP-205ENST00000513720 MAP7D2Q96T17 732 aa5.12□□□□□ -1.59
AFP-205ENST00000513720 RBM28Q9NW13 759 aaKnown RBP5.12□□□□□ -1.59
AFP-205ENST00000513720 RBM27Q9P2N5 1060 aaKnown RBP5.12□□□□□ -1.59
AFP-205ENST00000513720 POLD1P28340 1107 aa5.11□□□□□ -1.59
AFP-205ENST00000513720 MYBPC2Q14324 1141 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms