RNA–Protein interactions for RNA: ENST00000513499.5

CCNH-210, Transcript of cyclin H, human

TSL 3

Gene CCNH, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNH-210	ENST00000513499	KCNH8	Q96L42	1107 aa		13.99	□□□□□ -0.17
CCNH-210	ENST00000513499	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.99	□□□□□ -0.17
CCNH-210	ENST00000513499	FXR2	P51116	673 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
CCNH-210	ENST00000513499	CD109	Q6YHK3	1445 aa		13.98	□□□□□ -0.17
CCNH-210	ENST00000513499	RAPGEF2	Q9Y4G8	1499 aa		13.97	□□□□□ -0.17
CCNH-210	ENST00000513499	KIAA0556	O60303	1618 aa		13.95	□□□□□ -0.18
CCNH-210	ENST00000513499	MAGI3	Q5TCQ9	1506 aa		13.95	□□□□□ -0.18
CCNH-210	ENST00000513499	PRR29	P0C7W0	189 aa		13.94	□□□□□ -0.18
CCNH-210	ENST00000513499	FBXO41	Q8TF61	875 aa		13.94	□□□□□ -0.18
CCNH-210	ENST00000513499	FKBP8	Q14318	412 aa		13.93	□□□□□ -0.18
CCNH-210	ENST00000513499	ARID3C	A6NKF2	412 aa		13.88	□□□□□ -0.19
CCNH-210	ENST00000513499	PRKAR2A	P13861	404 aa	Known RBP	13.88	□□□□□ -0.19
CCNH-210	ENST00000513499	ABCA8	O94911	1581 aa		13.88	□□□□□ -0.19
CCNH-210	ENST00000513499	CFAP43	Q8NDM7	1665 aa		13.85	□□□□□ -0.19
CCNH-210	ENST00000513499	ARAP3	Q8WWN8	1544 aa		13.85	□□□□□ -0.19
CCNH-210	ENST00000513499	RAPGEF3	O95398	923 aa		13.85	□□□□□ -0.19
CCNH-210	ENST00000513499	CHADL	Q6NUI6	762 aa		13.85	□□□□□ -0.19
CCNH-210	ENST00000513499	KIF21B	O75037	1637 aa		13.85	□□□□□ -0.19
CCNH-210	ENST00000513499	PTPRM	P28827	1452 aa		13.84	□□□□□ -0.19
CCNH-210	ENST00000513499	GOLGA3	Q08378	1498 aa		13.84	□□□□□ -0.19
CCNH-210	ENST00000513499	P3H3	Q8IVL6	736 aa		13.82	□□□□□ -0.2
CCNH-210	ENST00000513499	PROM2	Q8N271	834 aa		13.82	□□□□□ -0.2
CCNH-210	ENST00000513499	STAG3	Q9UJ98	1225 aa		13.82	□□□□□ -0.2
CCNH-210	ENST00000513499	ATP10B	O94823	1461 aa		13.81	□□□□□ -0.2
CCNH-210	ENST00000513499	PHLDB1	Q86UU1	1377 aa		13.78	□□□□□ -0.2
CCNH-210	ENST00000513499	ADAMTSL3	P82987	1691 aa		13.78	□□□□□ -0.2
CCNH-210	ENST00000513499	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.77	□□□□□ -0.21
CCNH-210	ENST00000513499	PRX	Q9BXM0	1461 aa		13.77	□□□□□ -0.21
CCNH-210	ENST00000513499	LMTK3	Q96Q04	1460 aa		13.74	□□□□□ -0.21
CCNH-210	ENST00000513499	HSPA2	P54652	639 aa		13.74	□□□□□ -0.21
CCNH-210	ENST00000513499	CTTNBP2	Q8WZ74	1663 aa		13.74	□□□□□ -0.21
CCNH-210	ENST00000513499	FAM9A	Q8IZU1	332 aa	Predicted RBP	13.73	□□□□□ -0.21
CCNH-210	ENST00000513499	NEO1	Q92859	1461 aa		13.73	□□□□□ -0.21
CCNH-210	ENST00000513499	ABCA9	Q8IUA7	1624 aa		13.72	□□□□□ -0.21
CCNH-210	ENST00000513499	PCF11	O94913	1555 aa	Known RBP	13.72	□□□□□ -0.21
CCNH-210	ENST00000513499	HAX1	O00165	279 aa		13.71	□□□□□ -0.21
CCNH-210	ENST00000513499	MADD	Q8WXG6	1647 aa		13.7	□□□□□ -0.22
CCNH-210	ENST00000513499	FRMPD1	Q5SYB0	1578 aa		13.7	□□□□□ -0.22
CCNH-210	ENST00000513499	BCORL1	Q5H9F3	1711 aa		13.7	□□□□□ -0.22
CCNH-210	ENST00000513499	CREBZF	Q9NS37	354 aa		13.67	□□□□□ -0.22
CCNH-210	ENST00000513499	CERK	Q8TCT0	537 aa		13.66	□□□□□ -0.22
CCNH-210	ENST00000513499	DENND4B	O75064	1496 aa	Predicted RBP	13.65	□□□□□ -0.22
CCNH-210	ENST00000513499	NUP153	P49790	1475 aa	Known RBP	13.64	□□□□□ -0.23
CCNH-210	ENST00000513499	AKNA	Q7Z591	1439 aa		13.64	□□□□□ -0.23
CCNH-210	ENST00000513499	PLEKHD1	A6NEE1	506 aa		13.63	□□□□□ -0.23
CCNH-210	ENST00000513499	RANGAP1	P46060	587 aa	Predicted RBP	13.63	□□□□□ -0.23
CCNH-210	ENST00000513499	FHOD3	Q2V2M9	1422 aa		13.63	□□□□□ -0.23
CCNH-210	ENST00000513499	RAPGEF6	Q8TEU7	1601 aa		13.62	□□□□□ -0.23
CCNH-210	ENST00000513499	MLEC	Q14165	292 aa		13.62	□□□□□ -0.23
CCNH-210	ENST00000513499	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.62	□□□□□ -0.23
CCNH-210	ENST00000513499	ARHGEF40	Q8TER5	1519 aa		13.62	□□□□□ -0.23
CCNH-210	ENST00000513499	YEATS2	Q9ULM3	1422 aa		13.62	□□□□□ -0.23
CCNH-210	ENST00000513499	RIMS1	Q86UR5	1692 aa	Known RBP	13.62	□□□□□ -0.23
CCNH-210	ENST00000513499	SAMD9	Q5K651	1589 aa		13.61	□□□□□ -0.23
CCNH-210	ENST00000513499	FANCA	O15360	1455 aa		13.6	□□□□□ -0.23
CCNH-210	ENST00000513499	POGZ	Q7Z3K3	1410 aa		13.59	□□□□□ -0.23
CCNH-210	ENST00000513499	EVX2	Q03828	476 aa		13.59	□□□□□ -0.23
CCNH-210	ENST00000513499	ILDR2	Q71H61	639 aa		13.59	□□□□□ -0.23
CCNH-210	ENST00000513499	RICTOR	Q6R327	1708 aa		13.56	□□□□□ -0.24
CCNH-210	ENST00000513499	SIGLEC1	Q9BZZ2	1709 aa		13.56	□□□□□ -0.24
CCNH-210	ENST00000513499	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
CCNH-210	ENST00000513499	CEBPA	P49715	358 aa	Predicted RBP	13.56	□□□□□ -0.24
CCNH-210	ENST00000513499	ZMYM4	Q5VZL5	1548 aa		13.54	□□□□□ -0.24
CCNH-210	ENST00000513499	ZFYVE16	Q7Z3T8	1539 aa		13.54	□□□□□ -0.24
CCNH-210	ENST00000513499	DISP3	Q9P2K9	1392 aa		13.53	□□□□□ -0.24
CCNH-210	ENST00000513499	SCAPER	Q9BY12	1400 aa		13.53	□□□□□ -0.24
CCNH-210	ENST00000513499	MAGI2	Q86UL8	1455 aa		13.53	□□□□□ -0.24
CCNH-210	ENST00000513499	C19orf67	A6NJJ6	358 aa		13.52	□□□□□ -0.25
CCNH-210	ENST00000513499	MIER1	Q8N108	512 aa		13.52	□□□□□ -0.25
CCNH-210	ENST00000513499	EFCAB5	A4FU69	1503 aa		13.52	□□□□□ -0.25
CCNH-210	ENST00000513499	HECW1	Q76N89	1606 aa		13.51	□□□□□ -0.25
CCNH-210	ENST00000513499	TTC37	Q6PGP7	1564 aa		13.51	□□□□□ -0.25
CCNH-210	ENST00000513499	SOCS7	O14512	581 aa		13.51	□□□□□ -0.25
CCNH-210	ENST00000513499	PLCH2	O75038	1416 aa		13.5	□□□□□ -0.25
CCNH-210	ENST00000513499	ATP10A	O60312	1499 aa		13.49	□□□□□ -0.25
CCNH-210	ENST00000513499	SP7	Q8TDD2	431 aa	Predicted RBP	13.49	□□□□□ -0.25
CCNH-210	ENST00000513499	ARHGEF12	Q9NZN5	1544 aa		13.49	□□□□□ -0.25
CCNH-210	ENST00000513499	CFAP74	Q9C0B2	1584 aa		13.48	□□□□□ -0.25
CCNH-210	ENST00000513499	CDK13	Q14004	1512 aa	Known RBP	13.47	□□□□□ -0.25
CCNH-210	ENST00000513499	MNX1	P50219	401 aa	Predicted RBP	13.46	□□□□□ -0.25
CCNH-210	ENST00000513499	EFCAB2	Q5VUJ9	269 aa		13.46	□□□□□ -0.25
CCNH-210	ENST00000513499	PLCD3	Q8N3E9	789 aa		13.46	□□□□□ -0.25
CCNH-210	ENST00000513499	AFAP1	Q8N556	730 aa		13.46	□□□□□ -0.25
CCNH-210	ENST00000513499	C9orf84	Q5VXU9	1444 aa		13.46	□□□□□ -0.26
CCNH-210	ENST00000513499	CD44	P16070	742 aa	Known RBP	13.45	□□□□□ -0.26
CCNH-210	ENST00000513499	FER1L4	A9Z1Z3	1794 aa		13.45	□□□□□ -0.26
CCNH-210	ENST00000513499	FBXO3	Q9UK99	471 aa		13.43	□□□□□ -0.26
CCNH-210	ENST00000513499	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.43	□□□□□ -0.26
CCNH-210	ENST00000513499	UHRF1BP1	Q6BDS2	1440 aa		13.42	□□□□□ -0.26
CCNH-210	ENST00000513499	STRC	Q7RTU9	1775 aa		13.41	□□□□□ -0.26
CCNH-210	ENST00000513499	PLEKHG5	O94827	1062 aa		13.41	□□□□□ -0.26
CCNH-210	ENST00000513499	PREX1	Q8TCU6	1659 aa		13.4	□□□□□ -0.26
CCNH-210	ENST00000513499	EEA1	Q15075	1411 aa		13.39	□□□□□ -0.27
CCNH-210	ENST00000513499	MYT1L	Q9UL68	1186 aa		13.39	□□□□□ -0.27
CCNH-210	ENST00000513499	PTPRT	O14522	1441 aa		13.39	□□□□□ -0.27
CCNH-210	ENST00000513499	ZNF518A	Q6AHZ1	1483 aa		13.38	□□□□□ -0.27
CCNH-210	ENST00000513499	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.37	□□□□□ -0.27
CCNH-210	ENST00000513499	LTBP4	Q8N2S1	1624 aa		13.35	□□□□□ -0.27
CCNH-210	ENST00000513499	ZRANB1	Q9UGI0	708 aa		13.35	□□□□□ -0.27
CCNH-210	ENST00000513499	KDM5C	P41229	1560 aa		13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms