RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 IER5LQ5T953 404 aa5.55□□□□□ -1.52
RNF4-219ENST00000513450 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.55□□□□□ -1.52
RNF4-219ENST00000513450 CADPS2Q86UW7 1296 aa5.53□□□□□ -1.52
RNF4-219ENST00000513450 SPNS2Q8IVW8 549 aa5.53□□□□□ -1.52
RNF4-219ENST00000513450 WDR70Q9NW82 654 aa5.53□□□□□ -1.52
RNF4-219ENST00000513450 IRX5P78411 483 aaPredicted RBP5.51□□□□□ -1.53
RNF4-219ENST00000513450 P3H3Q8IVL6 736 aa5.51□□□□□ -1.53
RNF4-219ENST00000513450 OCEL1Q9H607 264 aa5.51□□□□□ -1.53
RNF4-219ENST00000513450 PDE4AP27815 886 aa5.5□□□□□ -1.53
RNF4-219ENST00000513450 PLCG2P16885 1265 aa5.49□□□□□ -1.53
RNF4-219ENST00000513450 PDCD7Q8N8D1 485 aaKnown RBP5.49□□□□□ -1.53
RNF4-219ENST00000513450 NBR1Q14596 966 aa5.48□□□□□ -1.53
RNF4-219ENST00000513450 DPY19L2Q6NUT2 758 aa5.48□□□□□ -1.53
RNF4-219ENST00000513450 NCKAP5LQ9HCH0 1330 aa5.48□□□□□ -1.53
RNF4-219ENST00000513450 MARVELD3Q96A59 401 aa5.47□□□□□ -1.53
RNF4-219ENST00000513450 CRISPLD2Q9H0B8 497 aa5.47□□□□□ -1.53
RNF4-219ENST00000513450 G3V3G9 751 aa5.46□□□□□ -1.54
RNF4-219ENST00000513450 MFSD10Q14728 455 aa5.46□□□□□ -1.54
RNF4-219ENST00000513450 MICALL2Q8IY33 904 aa5.46□□□□□ -1.54
RNF4-219ENST00000513450 L3MBTL3Q96JM7 780 aaPredicted RBP5.46□□□□□ -1.54
RNF4-219ENST00000513450 TMEM121BQ9BXQ6 578 aaPredicted RBP5.46□□□□□ -1.54
RNF4-219ENST00000513450 BOLA1Q9Y3E2 137 aa5.46□□□□□ -1.54
RNF4-219ENST00000513450 SNPHO15079 494 aa5.45□□□□□ -1.54
RNF4-219ENST00000513450 E2F4Q16254 413 aa5.45□□□□□ -1.54
RNF4-219ENST00000513450 DDX27Q96GQ7 796 aaKnown RBP5.45□□□□□ -1.54
RNF4-219ENST00000513450 LARP6Q9BRS8 491 aaKnown RBP5.45□□□□□ -1.54
RNF4-219ENST00000513450 KCNV2Q8TDN2 545 aa5.44□□□□□ -1.54
RNF4-219ENST00000513450 GPHNQ9NQX3 736 aaPredicted RBP5.44□□□□□ -1.54
RNF4-219ENST00000513450 ARHGEF1Q92888 912 aaKnown RBP5.43□□□□□ -1.54
RNF4-219ENST00000513450 TMC2Q8TDI7 906 aa5.42□□□□□ -1.54
RNF4-219ENST00000513450 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.42□□□□□ -1.54
RNF4-219ENST00000513450 EMP3P54852 163 aa5.41□□□□□ -1.54
RNF4-219ENST00000513450 CAMK2BQ13554 666 aa5.41□□□□□ -1.54
RNF4-219ENST00000513450 PPP1R15BQ5SWA1 713 aa5.41□□□□□ -1.54
RNF4-219ENST00000513450 ARIH1Q9Y4X5 557 aaPredicted RBP5.41□□□□□ -1.54
RNF4-219ENST00000513450 KIF3CO14782 793 aa5.4□□□□□ -1.54
RNF4-219ENST00000513450 FOXK1P85037 733 aa5.4□□□□□ -1.54
RNF4-219ENST00000513450 DSG2Q14126 1118 aa5.38□□□□□ -1.55
RNF4-219ENST00000513450 C2orf72A6NCS6 295 aa5.37□□□□□ -1.55
RNF4-219ENST00000513450 FAM205CA6NFA0 338 aa5.37□□□□□ -1.55
RNF4-219ENST00000513450 C3orf67Q6ZVT6 689 aa5.36□□□□□ -1.55
RNF4-219ENST00000513450 PLPP6Q8IY26 295 aa5.36□□□□□ -1.55
RNF4-219ENST00000513450 HS3ST6Q96QI5 342 aa5.36□□□□□ -1.55
RNF4-219ENST00000513450 TULP1O00294 542 aaPredicted RBP5.35□□□□□ -1.55
RNF4-219ENST00000513450 TMEM92Q6UXU6 159 aa5.35□□□□□ -1.55
RNF4-219ENST00000513450 TPRNQ4KMQ1 711 aa5.34□□□□□ -1.55
RNF4-219ENST00000513450 KRTAP3-3Q9BYR6 98 aa5.34□□□□□ -1.55
RNF4-219ENST00000513450 KRTAP3-2Q9BYR7 98 aa5.34□□□□□ -1.55
RNF4-219ENST00000513450 TESPA1A2RU30 521 aaPredicted RBP5.33□□□□□ -1.56
RNF4-219ENST00000513450 SMYD5Q6GMV2 418 aa5.33□□□□□ -1.56
RNF4-219ENST00000513450 EMILIN3Q9NT22 766 aa5.33□□□□□ -1.56
RNF4-219ENST00000513450 SPDYE16A6NNV3 312 aaPredicted RBP5.32□□□□□ -1.56
RNF4-219ENST00000513450 SEMA3EO15041 775 aa5.32□□□□□ -1.56
RNF4-219ENST00000513450 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.32□□□□□ -1.56
RNF4-219ENST00000513450 DPYSL4O14531 572 aa5.31□□□□□ -1.56
RNF4-219ENST00000513450 PDIA6Q15084 440 aa5.31□□□□□ -1.56
RNF4-219ENST00000513450 POTEB3A0JP26 581 aa5.3□□□□□ -1.56
RNF4-219ENST00000513450 SLC34A2O95436 690 aa5.3□□□□□ -1.56
RNF4-219ENST00000513450 PRKCSHP14314 528 aaPredicted RBP5.3□□□□□ -1.56
RNF4-219ENST00000513450 MAP3K9P80192 1104 aa5.3□□□□□ -1.56
RNF4-219ENST00000513450 LMOD2Q6P5Q4 547 aa5.3□□□□□ -1.56
RNF4-219ENST00000513450 POTEBQ6S5H4 581 aa5.3□□□□□ -1.56
RNF4-219ENST00000513450 OXER1Q8TDS5 423 aa5.3□□□□□ -1.56
RNF4-219ENST00000513450 TBC1D12O60347 775 aa5.29□□□□□ -1.56
RNF4-219ENST00000513450 PTCD2Q8WV60 388 aaKnown RBP5.28□□□□□ -1.56
RNF4-219ENST00000513450 RNF166Q96A37 237 aaPredicted RBP5.28□□□□□ -1.56
RNF4-219ENST00000513450 UPF1Q92900 1129 aaKnown RBP eCLIP5.27□□□□□ -1.57
RNF4-219ENST00000513450 PTGER2P43116 358 aa5.26□□□□□ -1.57
RNF4-219ENST00000513450 ZNF316A6NFI3 1004 aaPredicted RBP5.25□□□□□ -1.57
RNF4-219ENST00000513450 MLLT3P42568 568 aaPredicted RBP5.25□□□□□ -1.57
RNF4-219ENST00000513450 ERBB3P21860 1342 aa5.24□□□□□ -1.57
RNF4-219ENST00000513450 EVI5O60447 810 aa5.24□□□□□ -1.57
RNF4-219ENST00000513450 ZNF710Q8N1W2 664 aa5.24□□□□□ -1.57
RNF4-219ENST00000513450 DOK7Q18PE1 504 aa5.23□□□□□ -1.57
RNF4-219ENST00000513450 ZC3H15Q8WU90 426 aaKnown RBP5.23□□□□□ -1.57
RNF4-219ENST00000513450 ANO8Q9HCE9 1232 aaPredicted RBP5.23□□□□□ -1.57
RNF4-219ENST00000513450 MYT1LQ9UL68 1186 aa5.23□□□□□ -1.57
RNF4-219ENST00000513450 RIMBP2O15034 1052 aa5.22□□□□□ -1.57
RNF4-219ENST00000513450 ZSWIM6Q9HCJ5 1215 aa5.22□□□□□ -1.57
RNF4-219ENST00000513450 PCDHGA4Q9Y5G9 962 aa5.22□□□□□ -1.57
RNF4-219ENST00000513450 GRXCR2A6NFK2 248 aa5.21□□□□□ -1.58
RNF4-219ENST00000513450 RBM26Q5T8P6 1007 aaKnown RBP5.21□□□□□ -1.58
RNF4-219ENST00000513450 GPIHBP1Q8IV16 184 aa5.21□□□□□ -1.58
RNF4-219ENST00000513450 ZMYND10O75800 440 aa5.2□□□□□ -1.58
RNF4-219ENST00000513450 HOXB3P14651 431 aaPredicted RBP5.2□□□□□ -1.58
RNF4-219ENST00000513450 OSBPP22059 807 aa5.2□□□□□ -1.58
RNF4-219ENST00000513450 DDX12PQ92771 950 aa5.2□□□□□ -1.58
RNF4-219ENST00000513450 KDM4FA0A1W2PPD8 638 aa5.19□□□□□ -1.58
RNF4-219ENST00000513450 PHF14O94880 888 aa5.19□□□□□ -1.58
RNF4-219ENST00000513450 EPAS1Q99814 870 aa5.19□□□□□ -1.58
RNF4-219ENST00000513450 HOXB1P14653 301 aaPredicted RBP5.18□□□□□ -1.58
RNF4-219ENST00000513450 VARS2Q5ST30 1063 aaKnown RBP5.18□□□□□ -1.58
RNF4-219ENST00000513450 GPR153Q6NV75 609 aa5.17□□□□□ -1.58
RNF4-219ENST00000513450 BARGINQ6ZT62 677 aa5.17□□□□□ -1.58
RNF4-219ENST00000513450 JPH4Q96JJ6 628 aa5.17□□□□□ -1.58
RNF4-219ENST00000513450 ARSIQ5FYB1 569 aa5.16□□□□□ -1.58
RNF4-219ENST00000513450 TYW1BQ6NUM6 668 aa5.16□□□□□ -1.58
RNF4-219ENST00000513450 FBXW7Q969H0 707 aa5.16□□□□□ -1.58
RNF4-219ENST00000513450 PCDHGA10Q9Y5H3 936 aa5.16□□□□□ -1.58
RNF4-219ENST00000513450 NUTM2FA1L443 756 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms