RNA–Protein interactions for RNA: ENST00000513287.5

CLDND1-226, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDND1, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-226ENST00000513287 POGZQ7Z3K3 1410 aa41.43■■■■■ 4.22
CLDND1-226ENST00000513287 ILDR1Q86SU0 546 aaPredicted RBP41.41■■■■■ 4.22
CLDND1-226ENST00000513287 KIF14Q15058 1648 aa41.39■■■■■ 4.22
CLDND1-226ENST00000513287 YEATS2Q9ULM3 1422 aa41.38■■■■■ 4.22
CLDND1-226ENST00000513287 CLIP1P30622 1438 aa41.37■■■■■ 4.21
CLDND1-226ENST00000513287 LRRIQ1Q96JM4 1722 aa41.33■■■■■ 4.21
CLDND1-226ENST00000513287 CASKIN1Q8WXD9 1431 aa41.31■■■■■ 4.2
CLDND1-226ENST00000513287 CCDC18Q5T9S5 1454 aa41.28■■■■■ 4.2
CLDND1-226ENST00000513287 RIMS1Q86UR5 1692 aaKnown RBP41.27■■■■■ 4.2
CLDND1-226ENST00000513287 SIGLEC1Q9BZZ2 1709 aa41.27■■■■■ 4.2
CLDND1-226ENST00000513287 ATP10AO60312 1499 aa41.26■■■■■ 4.2
CLDND1-226ENST00000513287 ZNF518AQ6AHZ1 1483 aa41.25■■■■■ 4.19
CLDND1-226ENST00000513287 PCF11O94913 1555 aaKnown RBP41.25■■■■■ 4.19
CLDND1-226ENST00000513287 ARHGAP5Q13017 1502 aa41.22■■■■■ 4.19
CLDND1-226ENST00000513287 LMTK3Q96Q04 1460 aa41.21■■■■■ 4.19
CLDND1-226ENST00000513287 KDM5CP41229 1560 aa41.2■■■■■ 4.19
CLDND1-226ENST00000513287 C9orf84Q5VXU9 1444 aa41.19■■■■■ 4.18
CLDND1-226ENST00000513287 CDC42BPBQ9Y5S2 1711 aa41.15■■■■■ 4.18
CLDND1-226ENST00000513287 FYCO1Q9BQS8 1478 aa41.13■■■■■ 4.17
CLDND1-226ENST00000513287 ARHGEF12Q9NZN5 1544 aa41.12■■■■■ 4.17
CLDND1-226ENST00000513287 AFAP1Q8N556 730 aa41.1■■■■■ 4.17
CLDND1-226ENST00000513287 PREX2Q70Z35 1606 aa41.1■■■■■ 4.17
CLDND1-226ENST00000513287 FER1L4A9Z1Z3 1794 aa41.09■■■■■ 4.17
CLDND1-226ENST00000513287 MLH3Q9UHC1 1453 aa41.07■■■■■ 4.16
CLDND1-226ENST00000513287 REREQ9P2R6 1566 aa41.05■■■■■ 4.16
CLDND1-226ENST00000513287 MLECQ14165 292 aa41.04■■■■■ 4.16
CLDND1-226ENST00000513287 ABCC1P33527 1531 aa41.01■■■■■ 4.16
CLDND1-226ENST00000513287 DIP2CQ9Y2E4 1556 aa40.97■■■■■ 4.15
CLDND1-226ENST00000513287 CDC42BPAQ5VT25 1732 aa40.96■■■■■ 4.15
CLDND1-226ENST00000513287 TRAPPC8Q9Y2L5 1435 aa40.93■■■■■ 4.14
CLDND1-226ENST00000513287 ITSN2Q9NZM3 1697 aa40.93■■■■■ 4.14
CLDND1-226ENST00000513287 FBXO41Q8TF61 875 aa40.92■■■■■ 4.14
CLDND1-226ENST00000513287 AGLP35573 1532 aa40.91■■■■■ 4.14
CLDND1-226ENST00000513287 MYT1LQ9UL68 1186 aa40.88■■■■■ 4.13
CLDND1-226ENST00000513287 ABCA6Q8N139 1617 aa40.88■■■■■ 4.13
CLDND1-226ENST00000513287 HSPA2P54652 639 aa40.85■■■■■ 4.13
CLDND1-226ENST00000513287 GPATCH8Q9UKJ3 1502 aaKnown RBP40.84■■■■■ 4.13
CLDND1-226ENST00000513287 PLPPR3Q6T4P5 718 aa40.84■■■■■ 4.13
CLDND1-226ENST00000513287 SETD1BQ9UPS6 1966 aaKnown RBP40.83■■■■■ 4.13
CLDND1-226ENST00000513287 KIDINS220Q9ULH0 1771 aa40.82■■■■■ 4.13
CLDND1-226ENST00000513287 PREX1Q8TCU6 1659 aa40.82■■■■■ 4.12
CLDND1-226ENST00000513287 KIAA1107Q9UPP5 1409 aa40.77■■■■■ 4.12
CLDND1-226ENST00000513287 SAMD9LQ8IVG5 1584 aa40.77■■■■■ 4.12
CLDND1-226ENST00000513287 CEBPAP49715 358 aaPredicted RBP40.74■■■■■ 4.11
CLDND1-226ENST00000513287 PLEKHH2Q8IVE3 1493 aa40.74■■■■■ 4.11
CLDND1-226ENST00000513287 ZNF777Q9ULD5 760 aaPredicted RBP40.69■■■■■ 4.1
CLDND1-226ENST00000513287 SYCP2Q9BX26 1530 aa40.68■■■■■ 4.1
CLDND1-226ENST00000513287 CFDP1Q9UEE9 299 aaPredicted RBP40.68■■■■■ 4.1
CLDND1-226ENST00000513287 MTUS2Q5JR59 1369 aa40.68■■■■■ 4.1
CLDND1-226ENST00000513287 CCNB3Q8WWL7 1395 aa40.67■■■■■ 4.1
CLDND1-226ENST00000513287 CNTLNQ9NXG0 1405 aa40.67■■■■■ 4.1
CLDND1-226ENST00000513287 UHRF1BP1Q6BDS2 1440 aa40.65■■■■■ 4.1
CLDND1-226ENST00000513287 SPAG9O60271 1321 aaKnown RBP40.65■■■■■ 4.1
CLDND1-226ENST00000513287 C3P01024 1663 aa40.64■■■■■ 4.1
CLDND1-226ENST00000513287 ESF1Q9H501 851 aaKnown RBP40.64■■■■■ 4.1
CLDND1-226ENST00000513287 HNRNPMP52272 730 aaKnown RBP eCLIP40.63■■■■■ 4.09
CLDND1-226ENST00000513287 DMRT2Q9Y5R5 561 aa40.59■■■■■ 4.09
CLDND1-226ENST00000513287 ATP7AQ04656 1500 aa40.57■■■■■ 4.08
CLDND1-226ENST00000513287 EHBP1L1Q8N3D4 1523 aa40.57■■■■■ 4.08
CLDND1-226ENST00000513287 CEP162Q5TB80 1403 aa40.55■■■■■ 4.08
CLDND1-226ENST00000513287 INO80Q9ULG1 1556 aaPredicted RBP40.54■■■■■ 4.08
CLDND1-226ENST00000513287 STRCQ7RTU9 1775 aa40.52■■■■■ 4.08
CLDND1-226ENST00000513287 MROH2AA6NES4 1674 aa40.52■■■■■ 4.08
CLDND1-226ENST00000513287 PLXNC1O60486 1568 aa40.51■■■■■ 4.08
CLDND1-226ENST00000513287 TIAM1Q13009 1591 aa40.5■■■■■ 4.07
CLDND1-226ENST00000513287 CERKQ8TCT0 537 aa40.49■■■■■ 4.07
CLDND1-226ENST00000513287 A2MP01023 1474 aa40.47■■■■■ 4.07
CLDND1-226ENST00000513287 NPATQ14207 1427 aa40.47■■■■■ 4.07
CLDND1-226ENST00000513287 MBD5Q9P267 1494 aa40.45■■■■■ 4.07
CLDND1-226ENST00000513287 SUPT6HQ7KZ85 1726 aaKnown RBP40.44■■■■■ 4.06
CLDND1-226ENST00000513287 PPP6R1Q9UPN7 881 aa40.43■■■■■ 4.06
CLDND1-226ENST00000513287 ZMYM3Q14202 1370 aa40.42■■■■■ 4.06
CLDND1-226ENST00000513287 RTEL1-TNFRSF6BF6WH68 1400 aa40.42■■■■■ 4.06
CLDND1-226ENST00000513287 PTPRTO14522 1441 aa40.4■■■■■ 4.06
CLDND1-226ENST00000513287 ADGBQ8N7X0 1667 aa40.4■■■■■ 4.06
CLDND1-226ENST00000513287 ZNF644Q9H582 1327 aaPredicted RBP40.38■■■■■ 4.05
CLDND1-226ENST00000513287 RSPH4AQ5TD94 716 aa40.34■■■■■ 4.05
CLDND1-226ENST00000513287 NCOA2Q15596 1464 aa40.29■■■■■ 4.04
CLDND1-226ENST00000513287 CLTCQ00610 1675 aaKnown RBP40.27■■■■■ 4.04
CLDND1-226ENST00000513287 NCOA1Q15788 1441 aa40.27■■■■■ 4.04
CLDND1-226ENST00000513287 DHX29Q7Z478 1369 aaKnown RBP40.26■■■■■ 4.04
CLDND1-226ENST00000513287 GGT6Q6P531 493 aa40.25■■■■■ 4.03
CLDND1-226ENST00000513287 CCDC141Q6ZP82 1450 aa40.21■■■■■ 4.03
CLDND1-226ENST00000513287 PTPRKQ15262 1439 aa40.21■■■■■ 4.03
CLDND1-226ENST00000513287 VPS8Q8N3P4 1428 aa40.19■■■■■ 4.02
CLDND1-226ENST00000513287 CAMSAP2Q08AD1 1489 aa40.19■■■■■ 4.02
CLDND1-226ENST00000513287 ZNF142P52746 1687 aaPredicted RBP40.16■■■■■ 4.02
CLDND1-226ENST00000513287 CAMSAP1Q5T5Y3 1602 aa40.16■■■■■ 4.02
CLDND1-226ENST00000513287 FAM135AQ9P2D6 1515 aa40.15■■■■■ 4.02
CLDND1-226ENST00000513287 ARHGEF5Q12774 1597 aa40.14■■■■■ 4.02
CLDND1-226ENST00000513287 MAP3K1Q13233 1512 aa40.13■■■■■ 4.01
CLDND1-226ENST00000513287 LRRC9Q6ZRR7 1453 aa40.13■■■■■ 4.01
CLDND1-226ENST00000513287 PLA2R1Q13018 1463 aa40.12■■■■■ 4.01
CLDND1-226ENST00000513287 MYO3AQ8NEV4 1616 aa40.11■■■■■ 4.01
CLDND1-226ENST00000513287 LTBP4Q8N2S1 1624 aa40.09■■■■■ 4.01
CLDND1-226ENST00000513287 CEP170BQ9Y4F5 1589 aaPredicted RBP40.07■■■■■ 4.01
CLDND1-226ENST00000513287 PKD2Q13563 968 aa40.07■■■■■ 4.01
CLDND1-226ENST00000513287 IQSEC2Q5JU85 1478 aa40.07■■■■■ 4
CLDND1-226ENST00000513287 LOC105371045A0A1W2PR82 267 aa40.06■■■■■ 4
CLDND1-226ENST00000513287 TSPY4P0CV99 314 aa40.05■■■■■ 4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms