RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 LRRIQ1Q96JM4 1722 aa18.06■□□□□ 0.48
SKP2-207ENST00000513263 ARID4BQ4LE39 1312 aaPredicted RBP18.06■□□□□ 0.48
SKP2-207ENST00000513263 TROQ12816 1431 aaPredicted RBP18.05■□□□□ 0.48
SKP2-207ENST00000513263 ZNF518AQ6AHZ1 1483 aa18.04■□□□□ 0.48
SKP2-207ENST00000513263 CHIC1Q5VXU3 224 aa18.03■□□□□ 0.48
SKP2-207ENST00000513263 PREX2Q70Z35 1606 aa18.02■□□□□ 0.48
SKP2-207ENST00000513263 ARHGAP5Q13017 1502 aa18.02■□□□□ 0.47
SKP2-207ENST00000513263 KDM5CP41229 1560 aa18.01■□□□□ 0.47
SKP2-207ENST00000513263 SCAPERQ9BY12 1400 aa18.01■□□□□ 0.47
SKP2-207ENST00000513263 CDC42BPBQ9Y5S2 1711 aa18■□□□□ 0.47
SKP2-207ENST00000513263 C9orf84Q5VXU9 1444 aa17.99■□□□□ 0.47
SKP2-207ENST00000513263 EFCAB2Q5VUJ9 269 aa17.99■□□□□ 0.47
SKP2-207ENST00000513263 CASKIN1Q8WXD9 1431 aa17.98■□□□□ 0.47
SKP2-207ENST00000513263 ATP1B4Q9UN42 357 aaPredicted RBP17.98■□□□□ 0.47
SKP2-207ENST00000513263 FYCO1Q9BQS8 1478 aa17.98■□□□□ 0.47
SKP2-207ENST00000513263 SIGLEC1Q9BZZ2 1709 aa17.98■□□□□ 0.47
SKP2-207ENST00000513263 REREQ9P2R6 1566 aa17.97■□□□□ 0.47
SKP2-207ENST00000513263 ATP10AO60312 1499 aa17.97■□□□□ 0.47
SKP2-207ENST00000513263 LMTK3Q96Q04 1460 aa17.97■□□□□ 0.47
SKP2-207ENST00000513263 YEATS2Q9ULM3 1422 aa17.97■□□□□ 0.47
SKP2-207ENST00000513263 ILDR1Q86SU0 546 aaPredicted RBP17.96■□□□□ 0.47
SKP2-207ENST00000513263 PREX1Q8TCU6 1659 aa17.96■□□□□ 0.47
SKP2-207ENST00000513263 ITSN2Q9NZM3 1697 aa17.96■□□□□ 0.47
SKP2-207ENST00000513263 CDC42BPAQ5VT25 1732 aa17.95■□□□□ 0.46
SKP2-207ENST00000513263 ARHGEF12Q9NZN5 1544 aa17.94■□□□□ 0.46
SKP2-207ENST00000513263 ABCC1P33527 1531 aa17.93■□□□□ 0.46
SKP2-207ENST00000513263 SETD1BQ9UPS6 1966 aaKnown RBP17.92■□□□□ 0.46
SKP2-207ENST00000513263 DIP2CQ9Y2E4 1556 aa17.91■□□□□ 0.46
SKP2-207ENST00000513263 EHMT2Q96KQ7 1210 aa17.9■□□□□ 0.46
SKP2-207ENST00000513263 MLH3Q9UHC1 1453 aa17.89■□□□□ 0.45
SKP2-207ENST00000513263 ABCA6Q8N139 1617 aa17.89■□□□□ 0.45
SKP2-207ENST00000513263 AGLP35573 1532 aa17.85■□□□□ 0.45
SKP2-207ENST00000513263 KIDINS220Q9ULH0 1771 aa17.83■□□□□ 0.44
SKP2-207ENST00000513263 PLEKHH2Q8IVE3 1493 aa17.82■□□□□ 0.44
SKP2-207ENST00000513263 FBXO41Q8TF61 875 aa17.81■□□□□ 0.44
SKP2-207ENST00000513263 MROH2AA6NES4 1674 aa17.8■□□□□ 0.44
SKP2-207ENST00000513263 C3P01024 1663 aa17.8■□□□□ 0.44
SKP2-207ENST00000513263 MLECQ14165 292 aa17.8■□□□□ 0.44
SKP2-207ENST00000513263 MYT1LQ9UL68 1186 aa17.8■□□□□ 0.44
SKP2-207ENST00000513263 SAMD9LQ8IVG5 1584 aa17.79■□□□□ 0.44
SKP2-207ENST00000513263 CNTLNQ9NXG0 1405 aa17.79■□□□□ 0.44
SKP2-207ENST00000513263 SYCP2Q9BX26 1530 aa17.77■□□□□ 0.44
SKP2-207ENST00000513263 AFAP1Q8N556 730 aa17.77■□□□□ 0.44
SKP2-207ENST00000513263 UHRF1BP1Q6BDS2 1440 aa17.77■□□□□ 0.44
SKP2-207ENST00000513263 EHBP1L1Q8N3D4 1523 aa17.77■□□□□ 0.43
SKP2-207ENST00000513263 INO80Q9ULG1 1556 aaPredicted RBP17.75■□□□□ 0.43
SKP2-207ENST00000513263 TRAPPC8Q9Y2L5 1435 aa17.75■□□□□ 0.43
SKP2-207ENST00000513263 ADGBQ8N7X0 1667 aa17.74■□□□□ 0.43
SKP2-207ENST00000513263 KIAA1107Q9UPP5 1409 aa17.74■□□□□ 0.43
SKP2-207ENST00000513263 ESF1Q9H501 851 aaKnown RBP17.74■□□□□ 0.43
SKP2-207ENST00000513263 ATP7AQ04656 1500 aa17.73■□□□□ 0.43
SKP2-207ENST00000513263 GPATCH8Q9UKJ3 1502 aaKnown RBP17.73■□□□□ 0.43
SKP2-207ENST00000513263 MTUS2Q5JR59 1369 aa17.72■□□□□ 0.43
SKP2-207ENST00000513263 PLPPR3Q6T4P5 718 aa17.72■□□□□ 0.43
SKP2-207ENST00000513263 PLXNC1O60486 1568 aa17.71■□□□□ 0.43
SKP2-207ENST00000513263 SUPT6HQ7KZ85 1726 aaKnown RBP17.71■□□□□ 0.43
SKP2-207ENST00000513263 STRCQ7RTU9 1775 aa17.71■□□□□ 0.43
SKP2-207ENST00000513263 CCNB3Q8WWL7 1395 aa17.7■□□□□ 0.42
SKP2-207ENST00000513263 DMRT2Q9Y5R5 561 aa17.7■□□□□ 0.42
SKP2-207ENST00000513263 HSPA2P54652 639 aa17.69■□□□□ 0.42
SKP2-207ENST00000513263 TIAM1Q13009 1591 aa17.69■□□□□ 0.42
SKP2-207ENST00000513263 NPATQ14207 1427 aa17.67■□□□□ 0.42
SKP2-207ENST00000513263 SPAG9O60271 1321 aaKnown RBP17.67■□□□□ 0.42
SKP2-207ENST00000513263 CFDP1Q9UEE9 299 aaPredicted RBP17.66■□□□□ 0.42
SKP2-207ENST00000513263 ZNF142P52746 1687 aaPredicted RBP17.66■□□□□ 0.42
SKP2-207ENST00000513263 CLTCQ00610 1675 aaKnown RBP17.64■□□□□ 0.42
SKP2-207ENST00000513263 CEP162Q5TB80 1403 aa17.64■□□□□ 0.42
SKP2-207ENST00000513263 ZNF777Q9ULD5 760 aaPredicted RBP17.64■□□□□ 0.41
SKP2-207ENST00000513263 A2MP01023 1474 aa17.63■□□□□ 0.41
SKP2-207ENST00000513263 FAM135AQ9P2D6 1515 aa17.63■□□□□ 0.41
SKP2-207ENST00000513263 CEBPAP49715 358 aaPredicted RBP17.61■□□□□ 0.41
SKP2-207ENST00000513263 PTPRTO14522 1441 aa17.61■□□□□ 0.41
SKP2-207ENST00000513263 MYO3AQ8NEV4 1616 aa17.61■□□□□ 0.41
SKP2-207ENST00000513263 RTEL1-TNFRSF6BF6WH68 1400 aa17.59■□□□□ 0.41
SKP2-207ENST00000513263 CERKQ8TCT0 537 aa17.59■□□□□ 0.41
SKP2-207ENST00000513263 PPP6R1Q9UPN7 881 aa17.58■□□□□ 0.4
SKP2-207ENST00000513263 IQSEC2Q5JU85 1478 aa17.56■□□□□ 0.4
SKP2-207ENST00000513263 CCDC141Q6ZP82 1450 aa17.56■□□□□ 0.4
SKP2-207ENST00000513263 NCOA1Q15788 1441 aa17.56■□□□□ 0.4
SKP2-207ENST00000513263 HNRNPMP52272 730 aaKnown RBP eCLIP17.56■□□□□ 0.4
SKP2-207ENST00000513263 ARHGEF5Q12774 1597 aa17.55■□□□□ 0.4
SKP2-207ENST00000513263 CEP170BQ9Y4F5 1589 aaPredicted RBP17.55■□□□□ 0.4
SKP2-207ENST00000513263 MBD5Q9P267 1494 aa17.55■□□□□ 0.4
SKP2-207ENST00000513263 CAMSAP1Q5T5Y3 1602 aa17.54■□□□□ 0.4
SKP2-207ENST00000513263 PLA2R1Q13018 1463 aa17.54■□□□□ 0.4
SKP2-207ENST00000513263 NCOA2Q15596 1464 aa17.54■□□□□ 0.4
SKP2-207ENST00000513263 ZMYM3Q14202 1370 aa17.53■□□□□ 0.4
SKP2-207ENST00000513263 CAMSAP2Q08AD1 1489 aa17.53■□□□□ 0.4
SKP2-207ENST00000513263 RSPH4AQ5TD94 716 aa17.53■□□□□ 0.4
SKP2-207ENST00000513263 KDM5DQ9BY66 1539 aa17.51■□□□□ 0.39
SKP2-207ENST00000513263 ZC3H13Q5T200 1668 aaKnown RBP17.5■□□□□ 0.39
SKP2-207ENST00000513263 MAP3K1Q13233 1512 aa17.5■□□□□ 0.39
SKP2-207ENST00000513263 POLR1AO95602 1720 aaPredicted RBP17.5■□□□□ 0.39
SKP2-207ENST00000513263 VPS8Q8N3P4 1428 aa17.49■□□□□ 0.39
SKP2-207ENST00000513263 PTPRKQ15262 1439 aa17.48■□□□□ 0.39
SKP2-207ENST00000513263 DHX29Q7Z478 1369 aaKnown RBP17.48■□□□□ 0.39
SKP2-207ENST00000513263 EIF2AK4Q9P2K8 1649 aaKnown RBP17.47■□□□□ 0.39
SKP2-207ENST00000513263 MAST1Q9Y2H9 1570 aa17.47■□□□□ 0.39
SKP2-207ENST00000513263 LTBP4Q8N2S1 1624 aa17.46■□□□□ 0.39
SKP2-207ENST00000513263 LRRC9Q6ZRR7 1453 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 186.2 ms