RNA–Protein interactions for RNA: ENST00000513153.5

LINC01088-210, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 695 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-210ENST00000513153 RIOK3O14730 519 aaKnown RBP13.08□□□□□ -0.32
LINC01088-210ENST00000513153 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.07□□□□□ -0.32
LINC01088-210ENST00000513153 ZFP91Q96JP5 570 aaPredicted RBP13.07□□□□□ -0.32
LINC01088-210ENST00000513153 ARSIQ5FYB1 569 aa13.06□□□□□ -0.32
LINC01088-210ENST00000513153 PTGER2P43116 358 aa13.05□□□□□ -0.32
LINC01088-210ENST00000513153 VGFO15240 615 aaPredicted RBP13.03□□□□□ -0.32
LINC01088-210ENST00000513153 ANKRD13DQ6ZTN6 518 aa13.03□□□□□ -0.32
LINC01088-210ENST00000513153 RNF25Q96BH1 459 aaPredicted RBP13.03□□□□□ -0.32
LINC01088-210ENST00000513153 ZNF316A6NFI3 1004 aaPredicted RBP12.99□□□□□ -0.33
LINC01088-210ENST00000513153 KHSRPQ92945 711 aaKnown RBP eCLIP12.99□□□□□ -0.337e-7■■□□□ 12.3
LINC01088-210ENST00000513153 NLRP6P59044 892 aa12.95□□□□□ -0.34
LINC01088-210ENST00000513153 LSM11P83369 360 aaKnown RBP eCLIP12.93□□□□□ -0.344e-6■■■■■ 28.9
LINC01088-210ENST00000513153 FBXO22Q8NEZ5 403 aa12.89□□□□□ -0.35
LINC01088-210ENST00000513153 BCL11BQ9C0K0 894 aaPredicted RBP12.88□□□□□ -0.35
LINC01088-210ENST00000513153 NUDT7P0C024 238 aa12.86□□□□□ -0.35
LINC01088-210ENST00000513153 C2orf72A6NCS6 295 aa12.84□□□□□ -0.35
LINC01088-210ENST00000513153 PBX2P40425 430 aa12.84□□□□□ -0.35
LINC01088-210ENST00000513153 TAOK2Q9UL54 1235 aa12.84□□□□□ -0.35
LINC01088-210ENST00000513153 STK24Q9Y6E0 443 aa12.84□□□□□ -0.35
LINC01088-210ENST00000513153 KIF3CO14782 793 aa12.82□□□□□ -0.36
LINC01088-210ENST00000513153 MFRPQ9BY79 579 aa12.81□□□□□ -0.36
LINC01088-210ENST00000513153 LHX6Q9UPM6 363 aa12.81□□□□□ -0.36
LINC01088-210ENST00000513153 AXIN2Q9Y2T1 843 aa12.81□□□□□ -0.36
LINC01088-210ENST00000513153 PCDHGA4Q9Y5G9 962 aa12.79□□□□□ -0.36
LINC01088-210ENST00000513153 POTEEQ6S8J3 1075 aa12.78□□□□□ -0.36
LINC01088-210ENST00000513153 STK25O00506 426 aa12.75□□□□□ -0.37
LINC01088-210ENST00000513153 SLC34A2O95436 690 aa12.75□□□□□ -0.37
LINC01088-210ENST00000513153 PLA2G2EQ9NZK7 142 aa12.75□□□□□ -0.37
LINC01088-210ENST00000513153 TMC2Q8TDI7 906 aa12.73□□□□□ -0.37
LINC01088-210ENST00000513153 HCSTQ9UBK5 93 aa12.73□□□□□ -0.37
LINC01088-210ENST00000513153 ADGRD1Q6QNK2 874 aa12.69□□□□□ -0.38
LINC01088-210ENST00000513153 ARHGAP33O14559 1287 aa12.68□□□□□ -0.38
LINC01088-210ENST00000513153 PSDA5PKW4 1024 aaPredicted RBP12.64□□□□□ -0.39
LINC01088-210ENST00000513153 ECM2O94769 699 aaPredicted RBP12.63□□□□□ -0.39
LINC01088-210ENST00000513153 TK2O00142 265 aa12.58□□□□□ -0.4
LINC01088-210ENST00000513153 PPP1R37O75864 691 aa12.57□□□□□ -0.4
LINC01088-210ENST00000513153 PSEN2P49810 448 aa12.57□□□□□ -0.4
LINC01088-210ENST00000513153 DMRTA1Q5VZB9 504 aa12.57□□□□□ -0.4
LINC01088-210ENST00000513153 KDM4FA0A1W2PPD8 638 aa12.56□□□□□ -0.4
LINC01088-210ENST00000513153 HRO43593 1189 aa12.56□□□□□ -0.4
LINC01088-210ENST00000513153 PTCD2Q8WV60 388 aaKnown RBP12.55□□□□□ -0.4
LINC01088-210ENST00000513153 RGL2O15211 777 aa12.53□□□□□ -0.4
LINC01088-210ENST00000513153 KCTD12Q96CX2 325 aaKnown RBP12.53□□□□□ -0.4
LINC01088-210ENST00000513153 STAC3Q96MF2 364 aa12.53□□□□□ -0.4
LINC01088-210ENST00000513153 PPP4R3BQ5MIZ7 849 aa12.51□□□□□ -0.41
LINC01088-210ENST00000513153 PLPP6Q8IY26 295 aa12.5□□□□□ -0.41
LINC01088-210ENST00000513153 FOXK1P85037 733 aa12.48□□□□□ -0.41
LINC01088-210ENST00000513153 TBC1D12O60347 775 aa12.46□□□□□ -0.41
LINC01088-210ENST00000513153 PKD2Q13563 968 aa12.46□□□□□ -0.41
LINC01088-210ENST00000513153 KCNH8Q96L42 1107 aa12.44□□□□□ -0.42
LINC01088-210ENST00000513153 KCNK17Q96T54 332 aa12.44□□□□□ -0.42
LINC01088-210ENST00000513153 GPHNQ9NQX3 736 aaPredicted RBP12.43□□□□□ -0.42
LINC01088-210ENST00000513153 PTPN5P54829 565 aa12.41□□□□□ -0.42
LINC01088-210ENST00000513153 DSG2Q14126 1118 aa12.41□□□□□ -0.42
LINC01088-210ENST00000513153 VPS9D1Q9Y2B5 631 aa12.38□□□□□ -0.43
LINC01088-210ENST00000513153 ZNF454Q8N9F8 522 aa12.33□□□□□ -0.44
LINC01088-210ENST00000513153 UPF1Q92900 1129 aaKnown RBP eCLIP12.31□□□□□ -0.44
LINC01088-210ENST00000513153 OXER1Q8TDS5 423 aa12.3□□□□□ -0.44
LINC01088-210ENST00000513153 RGS20O76081 388 aa12.29□□□□□ -0.44
LINC01088-210ENST00000513153 IFFO2Q5TF58 517 aa12.29□□□□□ -0.44
LINC01088-210ENST00000513153 SLC4A5Q9BY07 1137 aa12.29□□□□□ -0.44
LINC01088-210ENST00000513153 BCL2L12Q9HB09 334 aa12.29□□□□□ -0.44
LINC01088-210ENST00000513153 THSD4Q6ZMP0 1018 aa12.28□□□□□ -0.44
LINC01088-210ENST00000513153 GOLGA8CPA6NN73 597 aa12.27□□□□□ -0.45
LINC01088-210ENST00000513153 IRX2Q9BZI1 471 aaPredicted RBP12.27□□□□□ -0.45
LINC01088-210ENST00000513153 BHMG1C9JSJ3 638 aaPredicted RBP12.25□□□□□ -0.45
LINC01088-210ENST00000513153 PTPREP23469 700 aa12.25□□□□□ -0.45
LINC01088-210ENST00000513153 HS6ST3Q8IZP7 471 aa12.25□□□□□ -0.45
LINC01088-210ENST00000513153 A0A0G2JS52 829 aa12.23□□□□□ -0.45
LINC01088-210ENST00000513153 FOSBP53539 338 aa12.23□□□□□ -0.45
LINC01088-210ENST00000513153 MRPL50Q8N5N7 158 aaKnown RBP12.23□□□□□ -0.45
LINC01088-210ENST00000513153 WNT2BQ93097 391 aa12.23□□□□□ -0.45
LINC01088-210ENST00000513153 ZBED2Q9BTP6 218 aa12.22□□□□□ -0.45
LINC01088-210ENST00000513153 PPP1R15BQ5SWA1 713 aa12.18□□□□□ -0.46
LINC01088-210ENST00000513153 CRISPLD2Q9H0B8 497 aa12.17□□□□□ -0.46
LINC01088-210ENST00000513153 CHGAP10645 457 aaKnown RBP12.16□□□□□ -0.46
LINC01088-210ENST00000513153 NBPF3Q9H094 633 aa12.16□□□□□ -0.46
LINC01088-210ENST00000513153 JPH4Q96JJ6 628 aa12.15□□□□□ -0.46
LINC01088-210ENST00000513153 ZDHHC16Q969W1 377 aa12.14□□□□□ -0.47
LINC01088-210ENST00000513153 ANO8Q9HCE9 1232 aaPredicted RBP12.14□□□□□ -0.47
LINC01088-210ENST00000513153 ADAM33Q9BZ11 813 aa12.13□□□□□ -0.47
LINC01088-210ENST00000513153 EVI5O60447 810 aa12.12□□□□□ -0.47
LINC01088-210ENST00000513153 PDE4AP27815 886 aa12.1□□□□□ -0.47
LINC01088-210ENST00000513153 NKX1-1Q15270 411 aaPredicted RBP12.1□□□□□ -0.47
LINC01088-210ENST00000513153 RYDENQ9NUL5 291 aaKnown RBP12.1□□□□□ -0.47
LINC01088-210ENST00000513153 NCKAP5LQ9HCH0 1330 aa12.07□□□□□ -0.48
LINC01088-210ENST00000513153 ANKK1Q8NFD2 765 aa12.06□□□□□ -0.48
LINC01088-210ENST00000513153 DNAJC5Q9H3Z4 198 aa12.04□□□□□ -0.48
LINC01088-210ENST00000513153 RABGEF1Q9UJ41 708 aa12.04□□□□□ -0.48
LINC01088-210ENST00000513153 PPP1R3GB7ZBB8 358 aa12.03□□□□□ -0.48
LINC01088-210ENST00000513153 ITGBL1O95965 494 aaPredicted RBP12.03□□□□□ -0.48
LINC01088-210ENST00000513153 MAP3K9P80192 1104 aa12.03□□□□□ -0.48
LINC01088-210ENST00000513153 PROX2Q3B8N5 592 aa12.02□□□□□ -0.49
LINC01088-210ENST00000513153 BCAMP50895 628 aa12□□□□□ -0.49
LINC01088-210ENST00000513153 Q6ZNB5 142 aa12□□□□□ -0.49
LINC01088-210ENST00000513153 LARP6Q9BRS8 491 aaKnown RBP12□□□□□ -0.49
LINC01088-210ENST00000513153 DDX27Q96GQ7 796 aaKnown RBP11.99□□□□□ -0.49
LINC01088-210ENST00000513153 PCDHGA10Q9Y5H3 936 aa11.99□□□□□ -0.49
LINC01088-210ENST00000513153 COL9A1P20849 921 aa11.97□□□□□ -0.49
LINC01088-210ENST00000513153 SOWAHBA6NEL2 793 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms