RNA–Protein interactions for RNA: ENST00000513153.5

LINC01088-210, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 695 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-210ENST00000513153 RIOK3O14730 519 aaKnown RBP13.08□□□□□ -0.32
LINC01088-210ENST00000513153 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.07□□□□□ -0.32
LINC01088-210ENST00000513153 ZFP91Q96JP5 570 aaPredicted RBP13.07□□□□□ -0.32
LINC01088-210ENST00000513153 ARSIQ5FYB1 569 aa13.06□□□□□ -0.32
LINC01088-210ENST00000513153 PTGER2P43116 358 aa13.05□□□□□ -0.32
LINC01088-210ENST00000513153 VGFO15240 615 aaPredicted RBP13.03□□□□□ -0.32
LINC01088-210ENST00000513153 ANKRD13DQ6ZTN6 518 aa13.03□□□□□ -0.32
LINC01088-210ENST00000513153 RNF25Q96BH1 459 aaPredicted RBP13.03□□□□□ -0.32
LINC01088-210ENST00000513153 ZNF316A6NFI3 1004 aaPredicted RBP12.99□□□□□ -0.33
LINC01088-210ENST00000513153 KHSRPQ92945 711 aaKnown RBP eCLIP12.99□□□□□ -0.337e-7■■□□□ 12.3
LINC01088-210ENST00000513153 NLRP6P59044 892 aa12.95□□□□□ -0.34
LINC01088-210ENST00000513153 LSM11P83369 360 aaKnown RBP eCLIP12.93□□□□□ -0.344e-6■■■■■ 28.9
LINC01088-210ENST00000513153 FBXO22Q8NEZ5 403 aa12.89□□□□□ -0.35
LINC01088-210ENST00000513153 BCL11BQ9C0K0 894 aaPredicted RBP12.88□□□□□ -0.35
LINC01088-210ENST00000513153 NUDT7P0C024 238 aa12.86□□□□□ -0.35
LINC01088-210ENST00000513153 C2orf72A6NCS6 295 aa12.84□□□□□ -0.35
LINC01088-210ENST00000513153 PBX2P40425 430 aa12.84□□□□□ -0.35
LINC01088-210ENST00000513153 TAOK2Q9UL54 1235 aa12.84□□□□□ -0.35
LINC01088-210ENST00000513153 STK24Q9Y6E0 443 aa12.84□□□□□ -0.35
LINC01088-210ENST00000513153 KIF3CO14782 793 aa12.82□□□□□ -0.36
LINC01088-210ENST00000513153 MFRPQ9BY79 579 aa12.81□□□□□ -0.36
LINC01088-210ENST00000513153 LHX6Q9UPM6 363 aa12.81□□□□□ -0.36
LINC01088-210ENST00000513153 AXIN2Q9Y2T1 843 aa12.81□□□□□ -0.36
LINC01088-210ENST00000513153 PCDHGA4Q9Y5G9 962 aa12.79□□□□□ -0.36
LINC01088-210ENST00000513153 POTEEQ6S8J3 1075 aa12.78□□□□□ -0.36
LINC01088-210ENST00000513153 STK25O00506 426 aa12.75□□□□□ -0.37
LINC01088-210ENST00000513153 SLC34A2O95436 690 aa12.75□□□□□ -0.37
LINC01088-210ENST00000513153 PLA2G2EQ9NZK7 142 aa12.75□□□□□ -0.37
LINC01088-210ENST00000513153 TMC2Q8TDI7 906 aa12.73□□□□□ -0.37
LINC01088-210ENST00000513153 HCSTQ9UBK5 93 aa12.73□□□□□ -0.37
LINC01088-210ENST00000513153 ADGRD1Q6QNK2 874 aa12.69□□□□□ -0.38
LINC01088-210ENST00000513153 ARHGAP33O14559 1287 aa12.68□□□□□ -0.38
LINC01088-210ENST00000513153 PSDA5PKW4 1024 aaPredicted RBP12.64□□□□□ -0.39
LINC01088-210ENST00000513153 ECM2O94769 699 aaPredicted RBP12.63□□□□□ -0.39
LINC01088-210ENST00000513153 TK2O00142 265 aa12.58□□□□□ -0.4
LINC01088-210ENST00000513153 PPP1R37O75864 691 aa12.57□□□□□ -0.4
LINC01088-210ENST00000513153 PSEN2P49810 448 aa12.57□□□□□ -0.4
LINC01088-210ENST00000513153 DMRTA1Q5VZB9 504 aa12.57□□□□□ -0.4
LINC01088-210ENST00000513153 KDM4FA0A1W2PPD8 638 aa12.56□□□□□ -0.4
LINC01088-210ENST00000513153 HRO43593 1189 aa12.56□□□□□ -0.4
LINC01088-210ENST00000513153 PTCD2Q8WV60 388 aaKnown RBP12.55□□□□□ -0.4
LINC01088-210ENST00000513153 RGL2O15211 777 aa12.53□□□□□ -0.4
LINC01088-210ENST00000513153 KCTD12Q96CX2 325 aaKnown RBP12.53□□□□□ -0.4
LINC01088-210ENST00000513153 STAC3Q96MF2 364 aa12.53□□□□□ -0.4
LINC01088-210ENST00000513153 PPP4R3BQ5MIZ7 849 aa12.51□□□□□ -0.41
LINC01088-210ENST00000513153 PLPP6Q8IY26 295 aa12.5□□□□□ -0.41
LINC01088-210ENST00000513153 FOXK1P85037 733 aa12.48□□□□□ -0.41
LINC01088-210ENST00000513153 TBC1D12O60347 775 aa12.46□□□□□ -0.41
LINC01088-210ENST00000513153 PKD2Q13563 968 aa12.46□□□□□ -0.41
LINC01088-210ENST00000513153 KCNH8Q96L42 1107 aa12.44□□□□□ -0.42
LINC01088-210ENST00000513153 KCNK17Q96T54 332 aa12.44□□□□□ -0.42
LINC01088-210ENST00000513153 GPHNQ9NQX3 736 aaPredicted RBP12.43□□□□□ -0.42
LINC01088-210ENST00000513153 PTPN5P54829 565 aa12.41□□□□□ -0.42
LINC01088-210ENST00000513153 DSG2Q14126 1118 aa12.41□□□□□ -0.42
LINC01088-210ENST00000513153 VPS9D1Q9Y2B5 631 aa12.38□□□□□ -0.43
LINC01088-210ENST00000513153 ZNF454Q8N9F8 522 aa12.33□□□□□ -0.44
LINC01088-210ENST00000513153 UPF1Q92900 1129 aaKnown RBP eCLIP12.31□□□□□ -0.44
LINC01088-210ENST00000513153 OXER1Q8TDS5 423 aa12.3□□□□□ -0.44
LINC01088-210ENST00000513153 RGS20O76081 388 aa12.29□□□□□ -0.44
LINC01088-210ENST00000513153 IFFO2Q5TF58 517 aa12.29□□□□□ -0.44
LINC01088-210ENST00000513153 SLC4A5Q9BY07 1137 aa12.29□□□□□ -0.44
LINC01088-210ENST00000513153 BCL2L12Q9HB09 334 aa12.29□□□□□ -0.44
LINC01088-210ENST00000513153 THSD4Q6ZMP0 1018 aa12.28□□□□□ -0.44
LINC01088-210ENST00000513153 GOLGA8CPA6NN73 597 aa12.27□□□□□ -0.45
LINC01088-210ENST00000513153 IRX2Q9BZI1 471 aaPredicted RBP12.27□□□□□ -0.45
LINC01088-210ENST00000513153 BHMG1C9JSJ3 638 aaPredicted RBP12.25□□□□□ -0.45
LINC01088-210ENST00000513153 PTPREP23469 700 aa12.25□□□□□ -0.45
LINC01088-210ENST00000513153 HS6ST3Q8IZP7 471 aa12.25□□□□□ -0.45
LINC01088-210ENST00000513153 A0A0G2JS52 829 aa12.23□□□□□ -0.45
LINC01088-210ENST00000513153 FOSBP53539 338 aa12.23□□□□□ -0.45
LINC01088-210ENST00000513153 MRPL50Q8N5N7 158 aaKnown RBP12.23□□□□□ -0.45
LINC01088-210ENST00000513153 WNT2BQ93097 391 aa12.23□□□□□ -0.45
LINC01088-210ENST00000513153 ZBED2Q9BTP6 218 aa12.22□□□□□ -0.45
LINC01088-210ENST00000513153 PPP1R15BQ5SWA1 713 aa12.18□□□□□ -0.46
LINC01088-210ENST00000513153 CRISPLD2Q9H0B8 497 aa12.17□□□□□ -0.46
LINC01088-210ENST00000513153 CHGAP10645 457 aaKnown RBP12.16□□□□□ -0.46
LINC01088-210ENST00000513153 NBPF3Q9H094 633 aa12.16□□□□□ -0.46
LINC01088-210ENST00000513153 JPH4Q96JJ6 628 aa12.15□□□□□ -0.46
LINC01088-210ENST00000513153 ZDHHC16Q969W1 377 aa12.14□□□□□ -0.47
LINC01088-210ENST00000513153 ANO8Q9HCE9 1232 aaPredicted RBP12.14□□□□□ -0.47
LINC01088-210ENST00000513153 ADAM33Q9BZ11 813 aa12.13□□□□□ -0.47
LINC01088-210ENST00000513153 EVI5O60447 810 aa12.12□□□□□ -0.47
LINC01088-210ENST00000513153 PDE4AP27815 886 aa12.1□□□□□ -0.47
LINC01088-210ENST00000513153 NKX1-1Q15270 411 aaPredicted RBP12.1□□□□□ -0.47
LINC01088-210ENST00000513153 RYDENQ9NUL5 291 aaKnown RBP12.1□□□□□ -0.47
LINC01088-210ENST00000513153 NCKAP5LQ9HCH0 1330 aa12.07□□□□□ -0.48
LINC01088-210ENST00000513153 ANKK1Q8NFD2 765 aa12.06□□□□□ -0.48
LINC01088-210ENST00000513153 DNAJC5Q9H3Z4 198 aa12.04□□□□□ -0.48
LINC01088-210ENST00000513153 RABGEF1Q9UJ41 708 aa12.04□□□□□ -0.48
LINC01088-210ENST00000513153 PPP1R3GB7ZBB8 358 aa12.03□□□□□ -0.48
LINC01088-210ENST00000513153 ITGBL1O95965 494 aaPredicted RBP12.03□□□□□ -0.48
LINC01088-210ENST00000513153 MAP3K9P80192 1104 aa12.03□□□□□ -0.48
LINC01088-210ENST00000513153 PROX2Q3B8N5 592 aa12.02□□□□□ -0.49
LINC01088-210ENST00000513153 BCAMP50895 628 aa12□□□□□ -0.49
LINC01088-210ENST00000513153 Q6ZNB5 142 aa12□□□□□ -0.49
LINC01088-210ENST00000513153 LARP6Q9BRS8 491 aaKnown RBP12□□□□□ -0.49
LINC01088-210ENST00000513153 DDX27Q96GQ7 796 aaKnown RBP11.99□□□□□ -0.49
LINC01088-210ENST00000513153 PCDHGA10Q9Y5H3 936 aa11.99□□□□□ -0.49
LINC01088-210ENST00000513153 COL9A1P20849 921 aa11.97□□□□□ -0.49
LINC01088-210ENST00000513153 SOWAHBA6NEL2 793 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms