RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 ARAP3Q8WWN8 1544 aa25.64■■□□□ 1.7
HMGCL-209ENST00000513148 GPATCH8Q9UKJ3 1502 aaKnown RBP25.64■■□□□ 1.7
HMGCL-209ENST00000513148 NEO1Q92859 1461 aa25.64■■□□□ 1.7
HMGCL-209ENST00000513148 ITSN2Q9NZM3 1697 aa25.63■■□□□ 1.69
HMGCL-209ENST00000513148 PPARGC1BQ86YN6 1023 aaKnown RBP25.61■■□□□ 1.69
HMGCL-209ENST00000513148 AKNAQ7Z591 1439 aa25.6■■□□□ 1.69
HMGCL-209ENST00000513148 COL17A1Q9UMD9 1497 aaPredicted RBP25.6■■□□□ 1.69
HMGCL-209ENST00000513148 EFCAB2Q5VUJ9 269 aa25.6■■□□□ 1.69
HMGCL-209ENST00000513148 ZNF777Q9ULD5 760 aaPredicted RBP25.58■■□□□ 1.68
HMGCL-209ENST00000513148 CFDP1Q9UEE9 299 aaPredicted RBP25.57■■□□□ 1.68
HMGCL-209ENST00000513148 ADGRL1O94910 1474 aa25.56■■□□□ 1.68
HMGCL-209ENST00000513148 PHLDB1Q86UU1 1377 aa25.55■■□□□ 1.68
HMGCL-209ENST00000513148 SAMD9LQ8IVG5 1584 aa25.54■■□□□ 1.68
HMGCL-209ENST00000513148 SCAPERQ9BY12 1400 aa25.51■■□□□ 1.67
HMGCL-209ENST00000513148 RAPGEF3O95398 923 aa25.51■■□□□ 1.67
HMGCL-209ENST00000513148 ABCC1P33527 1531 aa25.5■■□□□ 1.67
HMGCL-209ENST00000513148 MYOM3Q5VTT5 1437 aa25.5■■□□□ 1.67
HMGCL-209ENST00000513148 DENND4BO75064 1496 aaPredicted RBP25.49■■□□□ 1.67
HMGCL-209ENST00000513148 FRMPD1Q5SYB0 1578 aa25.49■■□□□ 1.67
HMGCL-209ENST00000513148 RICTORQ6R327 1708 aa25.48■■□□□ 1.67
HMGCL-209ENST00000513148 ZNF644Q9H582 1327 aaPredicted RBP25.47■■□□□ 1.67
HMGCL-209ENST00000513148 SYCP2Q9BX26 1530 aa25.47■■□□□ 1.67
HMGCL-209ENST00000513148 ARHGEF12Q9NZN5 1544 aa25.45■■□□□ 1.66
HMGCL-209ENST00000513148 POGZQ7Z3K3 1410 aa25.44■■□□□ 1.66
HMGCL-209ENST00000513148 CAMSAP2Q08AD1 1489 aa25.44■■□□□ 1.66
HMGCL-209ENST00000513148 HRCP23327 699 aa25.43■■□□□ 1.66
HMGCL-209ENST00000513148 HNRNPMP52272 730 aaKnown RBP eCLIP25.41■■□□□ 1.66
HMGCL-209ENST00000513148 PLEKHH2Q8IVE3 1493 aa25.41■■□□□ 1.66
HMGCL-209ENST00000513148 MIA2Q96PC5 1412 aa25.4■■□□□ 1.66
HMGCL-209ENST00000513148 TRAPPC8Q9Y2L5 1435 aa25.4■■□□□ 1.66
HMGCL-209ENST00000513148 ZNF518AQ6AHZ1 1483 aa25.4■■□□□ 1.66
HMGCL-209ENST00000513148 FGD6Q6ZV73 1430 aa25.39■■□□□ 1.66
HMGCL-209ENST00000513148 AFAP1Q8N556 730 aa25.39■■□□□ 1.65
HMGCL-209ENST00000513148 PTPN23Q9H3S7 1636 aa25.38■■□□□ 1.65
HMGCL-209ENST00000513148 KIAA1107Q9UPP5 1409 aa25.37■■□□□ 1.65
HMGCL-209ENST00000513148 ZMYM4Q5VZL5 1548 aa25.35■■□□□ 1.65
HMGCL-209ENST00000513148 KDM5CP41229 1560 aa25.34■■□□□ 1.65
HMGCL-209ENST00000513148 MBD5Q9P267 1494 aa25.33■■□□□ 1.65
HMGCL-209ENST00000513148 MYT1LQ9UL68 1186 aa25.32■■□□□ 1.64
HMGCL-209ENST00000513148 HECW2Q9P2P5 1572 aa25.31■■□□□ 1.64
HMGCL-209ENST00000513148 ZFYVE16Q7Z3T8 1539 aa25.29■■□□□ 1.64
HMGCL-209ENST00000513148 YEATS2Q9ULM3 1422 aa25.28■■□□□ 1.64
HMGCL-209ENST00000513148 TCOF1Q13428 1488 aaKnown RBP25.28■■□□□ 1.64
HMGCL-209ENST00000513148 CCDC141Q6ZP82 1450 aa25.28■■□□□ 1.64
HMGCL-209ENST00000513148 ARHGEF40Q8TER5 1519 aa25.28■■□□□ 1.64
HMGCL-209ENST00000513148 FAM50AQ14320 339 aaKnown RBP25.27■■□□□ 1.64
HMGCL-209ENST00000513148 ARHGEF5Q12774 1597 aa25.27■■□□□ 1.64
HMGCL-209ENST00000513148 MAGI2Q86UL8 1455 aa25.25■■□□□ 1.63
HMGCL-209ENST00000513148 SPAG9O60271 1321 aaKnown RBP25.25■■□□□ 1.63
HMGCL-209ENST00000513148 KIDINS220Q9ULH0 1771 aa25.25■■□□□ 1.63
HMGCL-209ENST00000513148 MLH3Q9UHC1 1453 aa25.23■■□□□ 1.63
HMGCL-209ENST00000513148 INO80Q9ULG1 1556 aaPredicted RBP25.23■■□□□ 1.63
HMGCL-209ENST00000513148 ATP7AQ04656 1500 aa25.23■■□□□ 1.63
HMGCL-209ENST00000513148 ABCA6Q8N139 1617 aa25.22■■□□□ 1.63
HMGCL-209ENST00000513148 DNMT1P26358 1616 aaKnown RBP25.21■■□□□ 1.63
HMGCL-209ENST00000513148 CROCC2H7BZ55 1655 aa25.2■■□□□ 1.62
HMGCL-209ENST00000513148 DIP2CQ9Y2E4 1556 aa25.2■■□□□ 1.62
HMGCL-209ENST00000513148 RSPH4AQ5TD94 716 aa25.2■■□□□ 1.62
HMGCL-209ENST00000513148 DAPK1P53355 1430 aa25.18■■□□□ 1.62
HMGCL-209ENST00000513148 TSPY4P0CV99 314 aa25.17■■□□□ 1.62
HMGCL-209ENST00000513148 TSPY10P0CW01 314 aa25.17■■□□□ 1.62
HMGCL-209ENST00000513148 PELP1Q8IZL8 1130 aaKnown RBP25.17■■□□□ 1.62
HMGCL-209ENST00000513148 ABCC5O15440 1437 aa25.17■■□□□ 1.62
HMGCL-209ENST00000513148 RRBP1Q9P2E9 1410 aaKnown RBP25.15■■□□□ 1.62
HMGCL-209ENST00000513148 SIGLEC1Q9BZZ2 1709 aa25.15■■□□□ 1.62
HMGCL-209ENST00000513148 C9orf84Q5VXU9 1444 aa25.15■■□□□ 1.62
HMGCL-209ENST00000513148 ATP10AO60312 1499 aa25.14■■□□□ 1.62
HMGCL-209ENST00000513148 RTEL1-TNFRSF6BF6WH68 1400 aa25.13■■□□□ 1.61
HMGCL-209ENST00000513148 MAST1Q9Y2H9 1570 aa25.12■■□□□ 1.61
HMGCL-209ENST00000513148 ARID4BQ4LE39 1312 aaPredicted RBP25.11■■□□□ 1.61
HMGCL-209ENST00000513148 ITGAEP38570 1179 aa25.11■■□□□ 1.61
HMGCL-209ENST00000513148 ADGBQ8N7X0 1667 aa25.11■■□□□ 1.61
HMGCL-209ENST00000513148 SHANK2Q9UPX8 1470 aa25.11■■□□□ 1.61
HMGCL-209ENST00000513148 CHIC2Q9UKJ5 165 aa25.1■■□□□ 1.61
HMGCL-209ENST00000513148 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.07■■□□□ 1.6
HMGCL-209ENST00000513148 A2MP01023 1474 aa25.05■■□□□ 1.6
HMGCL-209ENST00000513148 PLXNC1O60486 1568 aa25.05■■□□□ 1.6
HMGCL-209ENST00000513148 REREQ9P2R6 1566 aa25.05■■□□□ 1.6
HMGCL-209ENST00000513148 PTPRKQ15262 1439 aa25.04■■□□□ 1.6
HMGCL-209ENST00000513148 MLECQ14165 292 aa25.01■■□□□ 1.59
HMGCL-209ENST00000513148 RRP7BPQ9NSQ0 103 aa25.01■■□□□ 1.59
HMGCL-209ENST00000513148 BCORL1Q5H9F3 1711 aa25■■□□□ 1.59
HMGCL-209ENST00000513148 ANKRD30AQ9BXX3 1397 aa24.99■■□□□ 1.59
HMGCL-209ENST00000513148 KIF15Q9NS87 1388 aa24.99■■□□□ 1.59
HMGCL-209ENST00000513148 DHX29Q7Z478 1369 aaKnown RBP24.97■■□□□ 1.59
HMGCL-209ENST00000513148 ADGRL2O95490 1459 aa24.97■■□□□ 1.59
HMGCL-209ENST00000513148 AGLP35573 1532 aa24.97■■□□□ 1.59
HMGCL-209ENST00000513148 NCOA1Q15788 1441 aa24.96■■□□□ 1.59
HMGCL-209ENST00000513148 DUOX2Q9NRD8 1548 aa24.95■■□□□ 1.58
HMGCL-209ENST00000513148 KDM4FA0A1W2PPD8 638 aa24.92■■□□□ 1.58
HMGCL-209ENST00000513148 ADAMTSL3P82987 1691 aa24.91■■□□□ 1.58
HMGCL-209ENST00000513148 MADDQ8WXG6 1647 aa24.91■■□□□ 1.58
HMGCL-209ENST00000513148 KIF3BO15066 747 aa24.9■■□□□ 1.58
HMGCL-209ENST00000513148 FER1L4A9Z1Z3 1794 aa24.89■■□□□ 1.58
HMGCL-209ENST00000513148 ROCK1Q13464 1354 aa24.89■■□□□ 1.57
HMGCL-209ENST00000513148 EIF2AK4Q9P2K8 1649 aaKnown RBP24.88■■□□□ 1.57
HMGCL-209ENST00000513148 GGT6Q6P531 493 aa24.88■■□□□ 1.57
HMGCL-209ENST00000513148 ERBINQ96RT1 1412 aa24.87■■□□□ 1.57
HMGCL-209ENST00000513148 RIMS1Q86UR5 1692 aaKnown RBP24.86■■□□□ 1.57
HMGCL-209ENST00000513148 ANKRD50Q9ULJ7 1429 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms