RNA–Protein interactions for RNA: ENST00000513043.5

DDR1-270, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-270ENST00000513043 CFAP74Q9C0B2 1584 aa27.25■■□□□ 1.95
DDR1-270ENST00000513043 NCOA2Q15596 1464 aa27.25■■□□□ 1.95
DDR1-270ENST00000513043 CDC42BPAQ5VT25 1732 aa27.24■■□□□ 1.95
DDR1-270ENST00000513043 PHLDB1Q86UU1 1377 aa27.24■■□□□ 1.95
DDR1-270ENST00000513043 ARAP3Q8WWN8 1544 aa27.24■■□□□ 1.95
DDR1-270ENST00000513043 GPATCH8Q9UKJ3 1502 aaKnown RBP27.24■■□□□ 1.95
DDR1-270ENST00000513043 SUPT6HQ7KZ85 1726 aaKnown RBP27.24■■□□□ 1.95
DDR1-270ENST00000513043 CDC42BPBQ9Y5S2 1711 aa27.24■■□□□ 1.95
DDR1-270ENST00000513043 RAPGEF3O95398 923 aa27.2■■□□□ 1.94
DDR1-270ENST00000513043 ZNF777Q9ULD5 760 aaPredicted RBP27.2■■□□□ 1.94
DDR1-270ENST00000513043 ADGRL1O94910 1474 aa27.19■■□□□ 1.94
DDR1-270ENST00000513043 CFDP1Q9UEE9 299 aaPredicted RBP27.18■■□□□ 1.94
DDR1-270ENST00000513043 SCAPERQ9BY12 1400 aa27.16■■□□□ 1.94
DDR1-270ENST00000513043 DENND4BO75064 1496 aaPredicted RBP27.15■■□□□ 1.94
DDR1-270ENST00000513043 ITSN2Q9NZM3 1697 aa27.12■■□□□ 1.93
DDR1-270ENST00000513043 PPARGC1BQ86YN6 1023 aaKnown RBP27.11■■□□□ 1.93
DDR1-270ENST00000513043 FRMPD1Q5SYB0 1578 aa27.1■■□□□ 1.93
DDR1-270ENST00000513043 SAMD9LQ8IVG5 1584 aa27.09■■□□□ 1.93
DDR1-270ENST00000513043 ZNF644Q9H582 1327 aaPredicted RBP27.08■■□□□ 1.93
DDR1-270ENST00000513043 ABCC1P33527 1531 aa27.07■■□□□ 1.92
DDR1-270ENST00000513043 RICTORQ6R327 1708 aa27.07■■□□□ 1.92
DDR1-270ENST00000513043 POGZQ7Z3K3 1410 aa27.07■■□□□ 1.92
DDR1-270ENST00000513043 ARHGEF12Q9NZN5 1544 aa27.06■■□□□ 1.92
DDR1-270ENST00000513043 AFAP1Q8N556 730 aa27.04■■□□□ 1.92
DDR1-270ENST00000513043 HNRNPMP52272 730 aaKnown RBP eCLIP27.03■■□□□ 1.92
DDR1-270ENST00000513043 MYOM3Q5VTT5 1437 aa27.03■■□□□ 1.92
DDR1-270ENST00000513043 SYCP2Q9BX26 1530 aa27.03■■□□□ 1.92
DDR1-270ENST00000513043 TRAPPC8Q9Y2L5 1435 aa27.02■■□□□ 1.92
DDR1-270ENST00000513043 ZNF518AQ6AHZ1 1483 aa27■■□□□ 1.91
DDR1-270ENST00000513043 KDM4FA0A1W2PPD8 638 aa26.99■■□□□ 1.91
DDR1-270ENST00000513043 CAMSAP2Q08AD1 1489 aa26.99■■□□□ 1.91
DDR1-270ENST00000513043 PLEKHH2Q8IVE3 1493 aa26.99■■□□□ 1.91
DDR1-270ENST00000513043 MYT1LQ9UL68 1186 aa26.97■■□□□ 1.91
DDR1-270ENST00000513043 ZMYM4Q5VZL5 1548 aa26.96■■□□□ 1.91
DDR1-270ENST00000513043 KIAA1107Q9UPP5 1409 aa26.96■■□□□ 1.91
DDR1-270ENST00000513043 MIA2Q96PC5 1412 aa26.93■■□□□ 1.9
DDR1-270ENST00000513043 YEATS2Q9ULM3 1422 aa26.93■■□□□ 1.9
DDR1-270ENST00000513043 KDM5CP41229 1560 aa26.92■■□□□ 1.9
DDR1-270ENST00000513043 ZFYVE16Q7Z3T8 1539 aa26.91■■□□□ 1.9
DDR1-270ENST00000513043 MBD5Q9P267 1494 aa26.91■■□□□ 1.9
DDR1-270ENST00000513043 FGD6Q6ZV73 1430 aa26.9■■□□□ 1.9
DDR1-270ENST00000513043 ARHGEF40Q8TER5 1519 aa26.9■■□□□ 1.9
DDR1-270ENST00000513043 MAGI2Q86UL8 1455 aa26.89■■□□□ 1.9
DDR1-270ENST00000513043 HECW2Q9P2P5 1572 aa26.88■■□□□ 1.89
DDR1-270ENST00000513043 SPAG9O60271 1321 aaKnown RBP26.87■■□□□ 1.89
DDR1-270ENST00000513043 PTPN23Q9H3S7 1636 aa26.87■■□□□ 1.89
DDR1-270ENST00000513043 MLH3Q9UHC1 1453 aa26.84■■□□□ 1.89
DDR1-270ENST00000513043 CCDC141Q6ZP82 1450 aa26.83■■□□□ 1.89
DDR1-270ENST00000513043 FAM50AQ14320 339 aaKnown RBP26.81■■□□□ 1.88
DDR1-270ENST00000513043 ARHGEF5Q12774 1597 aa26.8■■□□□ 1.88
DDR1-270ENST00000513043 KIDINS220Q9ULH0 1771 aa26.8■■□□□ 1.88
DDR1-270ENST00000513043 ARID4BQ4LE39 1312 aaPredicted RBP26.8■■□□□ 1.88
DDR1-270ENST00000513043 TCOF1Q13428 1488 aaKnown RBP26.8■■□□□ 1.88
DDR1-270ENST00000513043 ABCA6Q8N139 1617 aa26.79■■□□□ 1.88
DDR1-270ENST00000513043 RSPH4AQ5TD94 716 aa26.79■■□□□ 1.88
DDR1-270ENST00000513043 ATP10AO60312 1499 aa26.79■■□□□ 1.88
DDR1-270ENST00000513043 ATP7AQ04656 1500 aa26.79■■□□□ 1.88
DDR1-270ENST00000513043 DIP2CQ9Y2E4 1556 aa26.79■■□□□ 1.88
DDR1-270ENST00000513043 INO80Q9ULG1 1556 aaPredicted RBP26.77■■□□□ 1.88
DDR1-270ENST00000513043 C9orf84Q5VXU9 1444 aa26.75■■□□□ 1.87
DDR1-270ENST00000513043 TSPY4P0CV99 314 aa26.75■■□□□ 1.87
DDR1-270ENST00000513043 TSPY10P0CW01 314 aa26.75■■□□□ 1.87
DDR1-270ENST00000513043 SIGLEC1Q9BZZ2 1709 aa26.73■■□□□ 1.87
DDR1-270ENST00000513043 ABCC5O15440 1437 aa26.71■■□□□ 1.87
DDR1-270ENST00000513043 RTEL1-TNFRSF6BF6WH68 1400 aa26.7■■□□□ 1.86
DDR1-270ENST00000513043 DAPK1P53355 1430 aa26.7■■□□□ 1.86
DDR1-270ENST00000513043 DNMT1P26358 1616 aaKnown RBP26.68■■□□□ 1.86
DDR1-270ENST00000513043 MLECQ14165 292 aa26.68■■□□□ 1.86
DDR1-270ENST00000513043 CHIC2Q9UKJ5 165 aa26.65■■□□□ 1.86
DDR1-270ENST00000513043 CROCC2H7BZ55 1655 aa26.65■■□□□ 1.86
DDR1-270ENST00000513043 REREQ9P2R6 1566 aa26.64■■□□□ 1.86
DDR1-270ENST00000513043 MAST1Q9Y2H9 1570 aa26.64■■□□□ 1.86
DDR1-270ENST00000513043 A2MP01023 1474 aa26.64■■□□□ 1.86
DDR1-270ENST00000513043 ITGAEP38570 1179 aa26.62■■□□□ 1.85
DDR1-270ENST00000513043 BCORL1Q5H9F3 1711 aa26.62■■□□□ 1.85
DDR1-270ENST00000513043 SHANK2Q9UPX8 1470 aa26.62■■□□□ 1.85
DDR1-270ENST00000513043 ADGBQ8N7X0 1667 aa26.61■■□□□ 1.85
DDR1-270ENST00000513043 RRBP1Q9P2E9 1410 aaKnown RBP26.61■■□□□ 1.85
DDR1-270ENST00000513043 AGLP35573 1532 aa26.57■■□□□ 1.84
DDR1-270ENST00000513043 RRP7BPQ9NSQ0 103 aa26.57■■□□□ 1.84
DDR1-270ENST00000513043 PLXNC1O60486 1568 aa26.57■■□□□ 1.84
DDR1-270ENST00000513043 DHX29Q7Z478 1369 aaKnown RBP26.57■■□□□ 1.84
DDR1-270ENST00000513043 PTPRKQ15262 1439 aa26.56■■□□□ 1.84
DDR1-270ENST00000513043 ADAMTSL3P82987 1691 aa26.55■■□□□ 1.84
DDR1-270ENST00000513043 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.55■■□□□ 1.84
DDR1-270ENST00000513043 MADDQ8WXG6 1647 aa26.54■■□□□ 1.84
DDR1-270ENST00000513043 KIF15Q9NS87 1388 aa26.53■■□□□ 1.84
DDR1-270ENST00000513043 ANKRD30AQ9BXX3 1397 aa26.52■■□□□ 1.84
DDR1-270ENST00000513043 KIF3BO15066 747 aa26.5■■□□□ 1.83
DDR1-270ENST00000513043 NCOA1Q15788 1441 aa26.49■■□□□ 1.83
DDR1-270ENST00000513043 GGT6Q6P531 493 aa26.49■■□□□ 1.83
DDR1-270ENST00000513043 DUOX2Q9NRD8 1548 aa26.48■■□□□ 1.83
DDR1-270ENST00000513043 ADGRL2O95490 1459 aa26.48■■□□□ 1.83
DDR1-270ENST00000513043 RIMS1Q86UR5 1692 aaKnown RBP26.47■■□□□ 1.83
DDR1-270ENST00000513043 FER1L4A9Z1Z3 1794 aa26.46■■□□□ 1.83
DDR1-270ENST00000513043 PLPPR3Q6T4P5 718 aa26.45■■□□□ 1.82
DDR1-270ENST00000513043 ESF1Q9H501 851 aaKnown RBP26.43■■□□□ 1.82
DDR1-270ENST00000513043 PTPRMP28827 1452 aa26.42■■□□□ 1.82
DDR1-270ENST00000513043 ERBINQ96RT1 1412 aa26.39■■□□□ 1.82
DDR1-270ENST00000513043 ROCK1Q13464 1354 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms