RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 PHLDB1Q86UU1 1377 aa10.45□□□□□ -0.74
KDM3B-208ENST00000512928 TROQ12816 1431 aaPredicted RBP10.44□□□□□ -0.74
KDM3B-208ENST00000512928 CEP162Q5TB80 1403 aa10.44□□□□□ -0.74
KDM3B-208ENST00000512928 RICTORQ6R327 1708 aa10.44□□□□□ -0.74
KDM3B-208ENST00000512928 MYO5CQ9NQX4 1742 aa10.44□□□□□ -0.74
KDM3B-208ENST00000512928 AKNAQ7Z591 1439 aa10.43□□□□□ -0.74
KDM3B-208ENST00000512928 DENND4BO75064 1496 aaPredicted RBP10.42□□□□□ -0.74
KDM3B-208ENST00000512928 LMTK3Q96Q04 1460 aa10.42□□□□□ -0.74
KDM3B-208ENST00000512928 LOC105371045A0A1W2PR82 267 aa10.42□□□□□ -0.74
KDM3B-208ENST00000512928 ARHGAP5Q13017 1502 aa10.42□□□□□ -0.74
KDM3B-208ENST00000512928 ARHGEF40Q8TER5 1519 aa10.42□□□□□ -0.74
KDM3B-208ENST00000512928 PLCH2O75038 1416 aa10.41□□□□□ -0.74
KDM3B-208ENST00000512928 ARID4BQ4LE39 1312 aaPredicted RBP10.4□□□□□ -0.74
KDM3B-208ENST00000512928 HSPA2P54652 639 aa10.4□□□□□ -0.74
KDM3B-208ENST00000512928 YEATS2Q9ULM3 1422 aa10.4□□□□□ -0.75
KDM3B-208ENST00000512928 EFCAB2Q5VUJ9 269 aa10.39□□□□□ -0.75
KDM3B-208ENST00000512928 SCAPERQ9BY12 1400 aa10.39□□□□□ -0.75
KDM3B-208ENST00000512928 MYT1LQ9UL68 1186 aa10.38□□□□□ -0.75
KDM3B-208ENST00000512928 MTUS2Q5JR59 1369 aa10.37□□□□□ -0.75
KDM3B-208ENST00000512928 PREX2Q70Z35 1606 aa10.36□□□□□ -0.75
KDM3B-208ENST00000512928 POGZQ7Z3K3 1410 aa10.36□□□□□ -0.75
KDM3B-208ENST00000512928 ZNF777Q9ULD5 760 aaPredicted RBP10.36□□□□□ -0.75
KDM3B-208ENST00000512928 ZFYVE16Q7Z3T8 1539 aa10.36□□□□□ -0.75
KDM3B-208ENST00000512928 FER1L4A9Z1Z3 1794 aa10.36□□□□□ -0.75
KDM3B-208ENST00000512928 MLECQ14165 292 aa10.35□□□□□ -0.75
KDM3B-208ENST00000512928 FBXO41Q8TF61 875 aa10.35□□□□□ -0.75
KDM3B-208ENST00000512928 ZMYM4Q5VZL5 1548 aa10.34□□□□□ -0.75
KDM3B-208ENST00000512928 CDC42BPBQ9Y5S2 1711 aa10.34□□□□□ -0.75
KDM3B-208ENST00000512928 CDC42BPAQ5VT25 1732 aa10.33□□□□□ -0.76
KDM3B-208ENST00000512928 ZNF518AQ6AHZ1 1483 aa10.33□□□□□ -0.76
KDM3B-208ENST00000512928 EHBP1L1Q8N3D4 1523 aa10.33□□□□□ -0.76
KDM3B-208ENST00000512928 CCNB3Q8WWL7 1395 aa10.32□□□□□ -0.76
KDM3B-208ENST00000512928 MAGI2Q86UL8 1455 aa10.31□□□□□ -0.76
KDM3B-208ENST00000512928 AFAP1Q8N556 730 aa10.31□□□□□ -0.76
KDM3B-208ENST00000512928 ABCC1P33527 1531 aa10.31□□□□□ -0.76
KDM3B-208ENST00000512928 VPS8Q8N3P4 1428 aa10.31□□□□□ -0.76
KDM3B-208ENST00000512928 GPATCH8Q9UKJ3 1502 aaKnown RBP10.3□□□□□ -0.76
KDM3B-208ENST00000512928 CFDP1Q9UEE9 299 aaPredicted RBP10.3□□□□□ -0.76
KDM3B-208ENST00000512928 ITSN2Q9NZM3 1697 aa10.3□□□□□ -0.76
KDM3B-208ENST00000512928 CEBPAP49715 358 aaPredicted RBP10.29□□□□□ -0.76
KDM3B-208ENST00000512928 SAMD9LQ8IVG5 1584 aa10.29□□□□□ -0.76
KDM3B-208ENST00000512928 SYCP2Q9BX26 1530 aa10.28□□□□□ -0.76
KDM3B-208ENST00000512928 ARHGEF12Q9NZN5 1544 aa10.28□□□□□ -0.76
KDM3B-208ENST00000512928 KDM5CP41229 1560 aa10.28□□□□□ -0.76
KDM3B-208ENST00000512928 TIAM1Q13009 1591 aa10.28□□□□□ -0.76
KDM3B-208ENST00000512928 TRAPPC8Q9Y2L5 1435 aa10.28□□□□□ -0.76
KDM3B-208ENST00000512928 ATP10AO60312 1499 aa10.28□□□□□ -0.76
KDM3B-208ENST00000512928 STRCQ7RTU9 1775 aa10.27□□□□□ -0.77
KDM3B-208ENST00000512928 C9orf84Q5VXU9 1444 aa10.27□□□□□ -0.77
KDM3B-208ENST00000512928 HNRNPMP52272 730 aaKnown RBP eCLIP10.27□□□□□ -0.77
KDM3B-208ENST00000512928 SUPT6HQ7KZ85 1726 aaKnown RBP10.27□□□□□ -0.77
KDM3B-208ENST00000512928 ABCA6Q8N139 1617 aa10.25□□□□□ -0.77
KDM3B-208ENST00000512928 PREX1Q8TCU6 1659 aa10.25□□□□□ -0.77
KDM3B-208ENST00000512928 NCOA2Q15596 1464 aa10.25□□□□□ -0.77
KDM3B-208ENST00000512928 PLEKHH2Q8IVE3 1493 aa10.25□□□□□ -0.77
KDM3B-208ENST00000512928 APLP2Q06481 763 aa10.25□□□□□ -0.77
KDM3B-208ENST00000512928 DIP2CQ9Y2E4 1556 aa10.25□□□□□ -0.77
KDM3B-208ENST00000512928 MLH3Q9UHC1 1453 aa10.24□□□□□ -0.77
KDM3B-208ENST00000512928 SPAG9O60271 1321 aaKnown RBP10.24□□□□□ -0.77
KDM3B-208ENST00000512928 ZNF644Q9H582 1327 aaPredicted RBP10.24□□□□□ -0.77
KDM3B-208ENST00000512928 LRRC9Q6ZRR7 1453 aa10.23□□□□□ -0.77
KDM3B-208ENST00000512928 C3P01024 1663 aa10.22□□□□□ -0.77
KDM3B-208ENST00000512928 KIAA1107Q9UPP5 1409 aa10.22□□□□□ -0.77
KDM3B-208ENST00000512928 ATP7AQ04656 1500 aa10.22□□□□□ -0.77
KDM3B-208ENST00000512928 KIDINS220Q9ULH0 1771 aa10.21□□□□□ -0.77
KDM3B-208ENST00000512928 KANK4Q5T7N3 995 aaPredicted RBP10.21□□□□□ -0.77
KDM3B-208ENST00000512928 CERKQ8TCT0 537 aa10.21□□□□□ -0.77
KDM3B-208ENST00000512928 ESF1Q9H501 851 aaKnown RBP10.21□□□□□ -0.77
KDM3B-208ENST00000512928 CAMSAP2Q08AD1 1489 aa10.21□□□□□ -0.78
KDM3B-208ENST00000512928 ILDR2Q71H61 639 aa10.2□□□□□ -0.78
KDM3B-208ENST00000512928 REREQ9P2R6 1566 aa10.19□□□□□ -0.78
KDM3B-208ENST00000512928 INO80Q9ULG1 1556 aaPredicted RBP10.19□□□□□ -0.78
KDM3B-208ENST00000512928 MAP3K1Q13233 1512 aa10.18□□□□□ -0.78
KDM3B-208ENST00000512928 A2MP01023 1474 aa10.17□□□□□ -0.78
KDM3B-208ENST00000512928 CCDC141Q6ZP82 1450 aa10.17□□□□□ -0.78
KDM3B-208ENST00000512928 MBD5Q9P267 1494 aa10.17□□□□□ -0.78
KDM3B-208ENST00000512928 AGLP35573 1532 aa10.16□□□□□ -0.78
KDM3B-208ENST00000512928 ADGBQ8N7X0 1667 aa10.15□□□□□ -0.78
KDM3B-208ENST00000512928 MYOM3Q5VTT5 1437 aa10.15□□□□□ -0.79
KDM3B-208ENST00000512928 TSPY4P0CV99 314 aa10.14□□□□□ -0.79
KDM3B-208ENST00000512928 TSPY10P0CW01 314 aa10.14□□□□□ -0.79
KDM3B-208ENST00000512928 GGT6Q6P531 493 aa10.14□□□□□ -0.79
KDM3B-208ENST00000512928 PLXNC1O60486 1568 aa10.14□□□□□ -0.79
KDM3B-208ENST00000512928 UHRF1BP1Q6BDS2 1440 aa10.13□□□□□ -0.79
KDM3B-208ENST00000512928 ARHGEF5Q12774 1597 aa10.13□□□□□ -0.79
KDM3B-208ENST00000512928 DISP3Q9P2K9 1392 aa10.13□□□□□ -0.79
KDM3B-208ENST00000512928 LTBP4Q8N2S1 1624 aa10.12□□□□□ -0.79
KDM3B-208ENST00000512928 RSPH4AQ5TD94 716 aa10.12□□□□□ -0.79
KDM3B-208ENST00000512928 RTEL1-TNFRSF6BF6WH68 1400 aa10.12□□□□□ -0.79
KDM3B-208ENST00000512928 MIA2Q96PC5 1412 aa10.12□□□□□ -0.79
KDM3B-208ENST00000512928 SPATA31D1Q6ZQQ2 1576 aa10.12□□□□□ -0.79
KDM3B-208ENST00000512928 CLTCQ00610 1675 aaKnown RBP10.12□□□□□ -0.79
KDM3B-208ENST00000512928 CNTLNQ9NXG0 1405 aa10.11□□□□□ -0.79
KDM3B-208ENST00000512928 KIF3BO15066 747 aa10.1□□□□□ -0.79
KDM3B-208ENST00000512928 PTPN23Q9H3S7 1636 aa10.1□□□□□ -0.79
KDM3B-208ENST00000512928 CAMSAP1Q5T5Y3 1602 aa10.09□□□□□ -0.79
KDM3B-208ENST00000512928 DHX29Q7Z478 1369 aaKnown RBP10.09□□□□□ -0.79
KDM3B-208ENST00000512928 FGD6Q6ZV73 1430 aa10.08□□□□□ -0.8
KDM3B-208ENST00000512928 MYO3AQ8NEV4 1616 aa10.08□□□□□ -0.8
KDM3B-208ENST00000512928 MROH2AA6NES4 1674 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms