RNA–Protein interactions for RNA: ENST00000512606.5

TMEM173-211, Transcript of transmembrane protein 173, humanhuman

TSL 1 (best)

Gene TMEM173, Length 838 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM173-211ENST00000512606 SETD1BQ9UPS6 1966 aaKnown RBP19.61■□□□□ 0.73
TMEM173-211ENST00000512606 KDM5CP41229 1560 aa19.6■□□□□ 0.73
TMEM173-211ENST00000512606 SPATA31D1Q6ZQQ2 1576 aa19.59■□□□□ 0.73
TMEM173-211ENST00000512606 PLEKHD1A6NEE1 506 aa19.59■□□□□ 0.73
TMEM173-211ENST00000512606 ATP10AO60312 1499 aa19.59■□□□□ 0.73
TMEM173-211ENST00000512606 REREQ9P2R6 1566 aa19.58■□□□□ 0.73
TMEM173-211ENST00000512606 PLCH2O75038 1416 aa19.58■□□□□ 0.72
TMEM173-211ENST00000512606 SCAPERQ9BY12 1400 aa19.58■□□□□ 0.72
TMEM173-211ENST00000512606 C3P01024 1663 aa19.56■□□□□ 0.72
TMEM173-211ENST00000512606 CSRNP3Q8WYN3 585 aa19.56■□□□□ 0.72
TMEM173-211ENST00000512606 EEA1Q15075 1411 aa19.56■□□□□ 0.72
TMEM173-211ENST00000512606 PLPPR3Q6T4P5 718 aa19.55■□□□□ 0.72
TMEM173-211ENST00000512606 DIP2CQ9Y2E4 1556 aa19.55■□□□□ 0.72
TMEM173-211ENST00000512606 KIF14Q15058 1648 aa19.54■□□□□ 0.72
TMEM173-211ENST00000512606 ABCA6Q8N139 1617 aa19.52■□□□□ 0.72
TMEM173-211ENST00000512606 MLECQ14165 292 aa19.52■□□□□ 0.72
TMEM173-211ENST00000512606 ILDR2Q71H61 639 aa19.52■□□□□ 0.72
TMEM173-211ENST00000512606 ZNF518AQ6AHZ1 1483 aa19.52■□□□□ 0.72
TMEM173-211ENST00000512606 UHRF1BP1Q6BDS2 1440 aa19.51■□□□□ 0.71
TMEM173-211ENST00000512606 DISP3Q9P2K9 1392 aa19.51■□□□□ 0.71
TMEM173-211ENST00000512606 LRRIQ1Q96JM4 1722 aa19.5■□□□□ 0.71
TMEM173-211ENST00000512606 LTBP4Q8N2S1 1624 aa19.48■□□□□ 0.71
TMEM173-211ENST00000512606 SOCS7O14512 581 aa19.48■□□□□ 0.71
TMEM173-211ENST00000512606 PTPRTO14522 1441 aa19.48■□□□□ 0.71
TMEM173-211ENST00000512606 CDC42BPBQ9Y5S2 1711 aa19.48■□□□□ 0.71
TMEM173-211ENST00000512606 IQSEC2Q5JU85 1478 aa19.48■□□□□ 0.71
TMEM173-211ENST00000512606 AGLP35573 1532 aa19.46■□□□□ 0.71
TMEM173-211ENST00000512606 ITSN2Q9NZM3 1697 aa19.45■□□□□ 0.7
TMEM173-211ENST00000512606 PREX2Q70Z35 1606 aa19.44■□□□□ 0.7
TMEM173-211ENST00000512606 ARHGAP5Q13017 1502 aa19.43■□□□□ 0.7
TMEM173-211ENST00000512606 ABCC1P33527 1531 aa19.42■□□□□ 0.7
TMEM173-211ENST00000512606 RANGAP1P46060 587 aaPredicted RBP19.42■□□□□ 0.7
TMEM173-211ENST00000512606 CEBPAP49715 358 aaPredicted RBP19.42■□□□□ 0.7
TMEM173-211ENST00000512606 DMRT2Q9Y5R5 561 aa19.42■□□□□ 0.7
TMEM173-211ENST00000512606 MROH2AA6NES4 1674 aa19.42■□□□□ 0.7
TMEM173-211ENST00000512606 MLH3Q9UHC1 1453 aa19.41■□□□□ 0.7
TMEM173-211ENST00000512606 KIDINS220Q9ULH0 1771 aa19.4■□□□□ 0.7
TMEM173-211ENST00000512606 TROQ12816 1431 aaPredicted RBP19.4■□□□□ 0.7
TMEM173-211ENST00000512606 EFCAB2Q5VUJ9 269 aa19.39■□□□□ 0.69
TMEM173-211ENST00000512606 NCOA1Q15788 1441 aa19.39■□□□□ 0.69
TMEM173-211ENST00000512606 FMN1Q68DA7 1419 aa19.39■□□□□ 0.69
TMEM173-211ENST00000512606 ZNF142P52746 1687 aaPredicted RBP19.37■□□□□ 0.69
TMEM173-211ENST00000512606 ARHGAP35Q9NRY4 1499 aa19.37■□□□□ 0.69
TMEM173-211ENST00000512606 CDC42BPAQ5VT25 1732 aa19.35■□□□□ 0.69
TMEM173-211ENST00000512606 TRAPPC8Q9Y2L5 1435 aa19.34■□□□□ 0.69
TMEM173-211ENST00000512606 CLIP1P30622 1438 aa19.33■□□□□ 0.68
TMEM173-211ENST00000512606 CNTLNQ9NXG0 1405 aa19.32■□□□□ 0.68
TMEM173-211ENST00000512606 CAMSAP1Q5T5Y3 1602 aa19.32■□□□□ 0.68
TMEM173-211ENST00000512606 AFAP1Q8N556 730 aa19.31■□□□□ 0.68
TMEM173-211ENST00000512606 MYO3AQ8NEV4 1616 aa19.31■□□□□ 0.68
TMEM173-211ENST00000512606 SUPT6HQ7KZ85 1726 aaKnown RBP19.31■□□□□ 0.68
TMEM173-211ENST00000512606 NPATQ14207 1427 aa19.29■□□□□ 0.68
TMEM173-211ENST00000512606 SAMD9LQ8IVG5 1584 aa19.27■□□□□ 0.67
TMEM173-211ENST00000512606 CDK11AQ9UQ88 783 aaPredicted RBP19.26■□□□□ 0.67
TMEM173-211ENST00000512606 PLXNC1O60486 1568 aa19.26■□□□□ 0.67
TMEM173-211ENST00000512606 CLTCQ00610 1675 aaKnown RBP19.24■□□□□ 0.67
TMEM173-211ENST00000512606 PLA2R1Q13018 1463 aa19.24■□□□□ 0.67
TMEM173-211ENST00000512606 INO80Q9ULG1 1556 aaPredicted RBP19.23■□□□□ 0.67
TMEM173-211ENST00000512606 CEP170BQ9Y4F5 1589 aaPredicted RBP19.23■□□□□ 0.67
TMEM173-211ENST00000512606 CCDC18Q5T9S5 1454 aa19.22■□□□□ 0.67
TMEM173-211ENST00000512606 TCOF1Q13428 1488 aaKnown RBP19.21■□□□□ 0.67
TMEM173-211ENST00000512606 SYCP2Q9BX26 1530 aa19.2■□□□□ 0.66
TMEM173-211ENST00000512606 POLR1AO95602 1720 aaPredicted RBP19.18■□□□□ 0.66
TMEM173-211ENST00000512606 ATP7AQ04656 1500 aa19.17■□□□□ 0.66
TMEM173-211ENST00000512606 MYT1LQ9UL68 1186 aa19.17■□□□□ 0.66
TMEM173-211ENST00000512606 ESF1Q9H501 851 aaKnown RBP19.16■□□□□ 0.66
TMEM173-211ENST00000512606 ATP1B4Q9UN42 357 aaPredicted RBP19.16■□□□□ 0.66
TMEM173-211ENST00000512606 CASKIN1Q8WXD9 1431 aa19.16■□□□□ 0.66
TMEM173-211ENST00000512606 MED1Q15648 1581 aaPredicted RBP19.15■□□□□ 0.66
TMEM173-211ENST00000512606 ZNF335Q9H4Z2 1342 aaPredicted RBP19.14■□□□□ 0.65
TMEM173-211ENST00000512606 ADGBQ8N7X0 1667 aa19.14■□□□□ 0.65
TMEM173-211ENST00000512606 ZMYM3Q14202 1370 aa19.13■□□□□ 0.65
TMEM173-211ENST00000512606 PTPRKQ15262 1439 aa19.13■□□□□ 0.65
TMEM173-211ENST00000512606 FYCO1Q9BQS8 1478 aa19.1■□□□□ 0.65
TMEM173-211ENST00000512606 DNMT1P26358 1616 aaKnown RBP19.1■□□□□ 0.65
TMEM173-211ENST00000512606 NEURL4Q96JN8 1562 aa19.1■□□□□ 0.65
TMEM173-211ENST00000512606 GPATCH8Q9UKJ3 1502 aaKnown RBP19.09■□□□□ 0.65
TMEM173-211ENST00000512606 A2MP01023 1474 aa19.09■□□□□ 0.65
TMEM173-211ENST00000512606 NCKAP5LQ9HCH0 1330 aa19.08■□□□□ 0.65
TMEM173-211ENST00000512606 UBAP1LF5GYI3 381 aa19.07■□□□□ 0.64
TMEM173-211ENST00000512606 UBTFP17480 764 aaKnown RBP19.07■□□□□ 0.64
TMEM173-211ENST00000512606 PKD2Q13563 968 aa19.07■□□□□ 0.64
TMEM173-211ENST00000512606 KIAA1107Q9UPP5 1409 aa19.07■□□□□ 0.64
TMEM173-211ENST00000512606 A2ML1A8K2U0 1454 aa19.06■□□□□ 0.64
TMEM173-211ENST00000512606 PLEKHH2Q8IVE3 1493 aa19.06■□□□□ 0.64
TMEM173-211ENST00000512606 CPS1P31327 1500 aa19.05■□□□□ 0.64
TMEM173-211ENST00000512606 SPAG9O60271 1321 aaKnown RBP19.03■□□□□ 0.64
TMEM173-211ENST00000512606 FAM135AQ9P2D6 1515 aa19.02■□□□□ 0.64
TMEM173-211ENST00000512606 ALKQ9UM73 1620 aa19.02■□□□□ 0.64
TMEM173-211ENST00000512606 VWDEQ8N2E2 1590 aa18.99■□□□□ 0.63
TMEM173-211ENST00000512606 PPP6R1Q9UPN7 881 aa18.99■□□□□ 0.63
TMEM173-211ENST00000512606 TIAM1Q13009 1591 aa18.98■□□□□ 0.63
TMEM173-211ENST00000512606 EHMT2Q96KQ7 1210 aa18.98■□□□□ 0.63
TMEM173-211ENST00000512606 DEPDC5O75140 1603 aa18.97■□□□□ 0.63
TMEM173-211ENST00000512606 SHANK2Q9UPX8 1470 aa18.96■□□□□ 0.63
TMEM173-211ENST00000512606 KDM5DQ9BY66 1539 aa18.95■□□□□ 0.62
TMEM173-211ENST00000512606 HNRNPMP52272 730 aaKnown RBP eCLIP18.94■□□□□ 0.62
TMEM173-211ENST00000512606 ZNF777Q9ULD5 760 aaPredicted RBP18.94■□□□□ 0.62
TMEM173-211ENST00000512606 PZPP20742 1482 aa18.94■□□□□ 0.62
TMEM173-211ENST00000512606 STRCP1A6NGW2 1772 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms