RNA–Protein interactions for RNA: ENST00000512522.1

PDGFRA-210, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-210ENST00000512522 GPATCH8Q9UKJ3 1502 aaKnown RBP15.27■□□□□ 0.04
PDGFRA-210ENST00000512522 MIA2Q96PC5 1412 aa15.27■□□□□ 0.04
PDGFRA-210ENST00000512522 MAPKBP1O60336 1514 aa15.26■□□□□ 0.03
PDGFRA-210ENST00000512522 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.26■□□□□ 0.03
PDGFRA-210ENST00000512522 TCOF1Q13428 1488 aaKnown RBP15.24■□□□□ 0.03
PDGFRA-210ENST00000512522 KCNH8Q96L42 1107 aa15.23■□□□□ 0.03
PDGFRA-210ENST00000512522 CDC42BPAQ5VT25 1732 aa15.23■□□□□ 0.03
PDGFRA-210ENST00000512522 TTC37Q6PGP7 1564 aa15.22■□□□□ 0.03
PDGFRA-210ENST00000512522 ITSN2Q9NZM3 1697 aa15.21■□□□□ 0.03
PDGFRA-210ENST00000512522 PTPN23Q9H3S7 1636 aa15.21■□□□□ 0.02
PDGFRA-210ENST00000512522 DMRT2Q9Y5R5 561 aa15.2■□□□□ 0.02
PDGFRA-210ENST00000512522 ABCA9Q8IUA7 1624 aa15.2■□□□□ 0.02
PDGFRA-210ENST00000512522 CFDP1Q9UEE9 299 aaPredicted RBP15.19■□□□□ 0.02
PDGFRA-210ENST00000512522 PLCH2O75038 1416 aa15.18■□□□□ 0.02
PDGFRA-210ENST00000512522 PREX2Q70Z35 1606 aa15.18■□□□□ 0.02
PDGFRA-210ENST00000512522 CDC42BPBQ9Y5S2 1711 aa15.18■□□□□ 0.02
PDGFRA-210ENST00000512522 FAM50AQ14320 339 aaKnown RBP15.17■□□□□ 0.02
PDGFRA-210ENST00000512522 ARAP3Q8WWN8 1544 aa15.17■□□□□ 0.02
PDGFRA-210ENST00000512522 MYO5CQ9NQX4 1742 aa15.16■□□□□ 0.02
PDGFRA-210ENST00000512522 ZNF644Q9H582 1327 aaPredicted RBP15.16■□□□□ 0.02
PDGFRA-210ENST00000512522 GLI2P10070 1586 aa15.15■□□□□ 0.02
PDGFRA-210ENST00000512522 CAMSAP2Q08AD1 1489 aa15.14■□□□□ 0.01
PDGFRA-210ENST00000512522 PTPRKQ15262 1439 aa15.12■□□□□ 0.01
PDGFRA-210ENST00000512522 SAMD9LQ8IVG5 1584 aa15.11■□□□□ 0.01
PDGFRA-210ENST00000512522 ARHGAP5Q13017 1502 aa15.11■□□□□ 0.01
PDGFRA-210ENST00000512522 MBD5Q9P267 1494 aa15.1■□□□□ 0.01
PDGFRA-210ENST00000512522 EFCAB2Q5VUJ9 269 aa15.1■□□□□ 0.01
PDGFRA-210ENST00000512522 DIP2BQ9P265 1576 aa15.1■□□□□ 0.01
PDGFRA-210ENST00000512522 ABCC5O15440 1437 aa15.09■□□□□ 0.01
PDGFRA-210ENST00000512522 CD109Q6YHK3 1445 aa15.09■□□□□ 0.01
PDGFRA-210ENST00000512522 KIAA1107Q9UPP5 1409 aa15.09■□□□□ 0.01
PDGFRA-210ENST00000512522 DNMT1P26358 1616 aaKnown RBP15.09■□□□□ 0.01
PDGFRA-210ENST00000512522 MAP3K4Q9Y6R4 1608 aa15.08■□□□□ 0
PDGFRA-210ENST00000512522 ZNF777Q9ULD5 760 aaPredicted RBP15.08■□□□□ 0
PDGFRA-210ENST00000512522 DAPK1P53355 1430 aa15.08■□□□□ 0
PDGFRA-210ENST00000512522 PLEKHH2Q8IVE3 1493 aa15.08■□□□□ 0
PDGFRA-210ENST00000512522 ITGAEP38570 1179 aa15.07■□□□□ 0
PDGFRA-210ENST00000512522 ARHGEF5Q12774 1597 aa15.07■□□□□ 0
PDGFRA-210ENST00000512522 FANCAO15360 1455 aa15.06■□□□□ 0
PDGFRA-210ENST00000512522 ARHGEF12Q9NZN5 1544 aa15.06■□□□□ 0
PDGFRA-210ENST00000512522 FAM69CQ0P6D2 419 aa15.05■□□□□ -0
PDGFRA-210ENST00000512522 RSPH4AQ5TD94 716 aa15.05■□□□□ -0
PDGFRA-210ENST00000512522 ABCC1P33527 1531 aa15.05■□□□□ -0
PDGFRA-210ENST00000512522 HNRNPMP52272 730 aaKnown RBP eCLIP15.04■□□□□ -0
PDGFRA-210ENST00000512522 AKNAQ7Z591 1439 aa15.03■□□□□ -0
PDGFRA-210ENST00000512522 RNF216Q9NWF9 866 aaPredicted RBP15.03■□□□□ -0
PDGFRA-210ENST00000512522 SYCP2Q9BX26 1530 aa15.02■□□□□ -0
PDGFRA-210ENST00000512522 SHANK2Q9UPX8 1470 aa15.02■□□□□ -0
PDGFRA-210ENST00000512522 ROCK1Q13464 1354 aa15.02■□□□□ -0
PDGFRA-210ENST00000512522 KIF13AQ9H1H9 1805 aa15.02■□□□□ -0
PDGFRA-210ENST00000512522 CROCC2H7BZ55 1655 aa15.02□□□□□ -0.01
PDGFRA-210ENST00000512522 CCDC141Q6ZP82 1450 aa15.01□□□□□ -0.01
PDGFRA-210ENST00000512522 ADGRL2O95490 1459 aa15.01□□□□□ -0.01
PDGFRA-210ENST00000512522 NEO1Q92859 1461 aa15.01□□□□□ -0.01
PDGFRA-210ENST00000512522 HFM1A2PYH4 1435 aa15□□□□□ -0.01
PDGFRA-210ENST00000512522 CFAP74Q9C0B2 1584 aa15□□□□□ -0.01
PDGFRA-210ENST00000512522 HRCP23327 699 aa14.99□□□□□ -0.01
PDGFRA-210ENST00000512522 SLC4A1APQ9BWU0 796 aaKnown RBP14.99□□□□□ -0.01
PDGFRA-210ENST00000512522 PPRC1Q5VV67 1664 aaKnown RBP14.99□□□□□ -0.01
PDGFRA-210ENST00000512522 NAIPQ13075 1403 aa14.99□□□□□ -0.01
PDGFRA-210ENST00000512522 SETD5Q9C0A6 1442 aa14.99□□□□□ -0.01
PDGFRA-210ENST00000512522 TRAPPC8Q9Y2L5 1435 aa14.99□□□□□ -0.01
PDGFRA-210ENST00000512522 MAST1Q9Y2H9 1570 aa14.98□□□□□ -0.01
PDGFRA-210ENST00000512522 ADGRL1O94910 1474 aa14.98□□□□□ -0.01
PDGFRA-210ENST00000512522 NCOA1Q15788 1441 aa14.98□□□□□ -0.01
PDGFRA-210ENST00000512522 TSPY4P0CV99 314 aa14.97□□□□□ -0.01
PDGFRA-210ENST00000512522 TSPY10P0CW01 314 aa14.97□□□□□ -0.01
PDGFRA-210ENST00000512522 CHIC2Q9UKJ5 165 aa14.97□□□□□ -0.01
PDGFRA-210ENST00000512522 C9orf84Q5VXU9 1444 aa14.97□□□□□ -0.01
PDGFRA-210ENST00000512522 SCAPERQ9BY12 1400 aa14.97□□□□□ -0.01
PDGFRA-210ENST00000512522 ADGBQ8N7X0 1667 aa14.95□□□□□ -0.02
PDGFRA-210ENST00000512522 RAB3GAP2Q9H2M9 1393 aa14.95□□□□□ -0.02
PDGFRA-210ENST00000512522 AFAP1Q8N556 730 aa14.94□□□□□ -0.02
PDGFRA-210ENST00000512522 RRP7BPQ9NSQ0 103 aa14.94□□□□□ -0.02
PDGFRA-210ENST00000512522 ANKRD30AQ9BXX3 1397 aa14.94□□□□□ -0.02
PDGFRA-210ENST00000512522 GCC2Q8IWJ2 1684 aa14.93□□□□□ -0.02
PDGFRA-210ENST00000512522 RTEL1-TNFRSF6BF6WH68 1400 aa14.93□□□□□ -0.02
PDGFRA-210ENST00000512522 HOXD11P31277 338 aaPredicted RBP14.93□□□□□ -0.02
PDGFRA-210ENST00000512522 TEX14Q8IWB6 1497 aa14.93□□□□□ -0.02
PDGFRA-210ENST00000512522 POGZQ7Z3K3 1410 aa14.92□□□□□ -0.02
PDGFRA-210ENST00000512522 TSPOAP1O95153 1857 aa14.91□□□□□ -0.02
PDGFRA-210ENST00000512522 PLXNC1O60486 1568 aa14.9□□□□□ -0.02
PDGFRA-210ENST00000512522 KDM5CP41229 1560 aa14.9□□□□□ -0.02
PDGFRA-210ENST00000512522 ZNF518AQ6AHZ1 1483 aa14.9□□□□□ -0.02
PDGFRA-210ENST00000512522 INO80Q9ULG1 1556 aaPredicted RBP14.9□□□□□ -0.02
PDGFRA-210ENST00000512522 DENND4BO75064 1496 aaPredicted RBP14.89□□□□□ -0.03
PDGFRA-210ENST00000512522 KDM6BO15054 1643 aa14.89□□□□□ -0.03
PDGFRA-210ENST00000512522 ZFYVE16Q7Z3T8 1539 aa14.89□□□□□ -0.03
PDGFRA-210ENST00000512522 SPAG9O60271 1321 aaKnown RBP14.89□□□□□ -0.03
PDGFRA-210ENST00000512522 MLH3Q9UHC1 1453 aa14.88□□□□□ -0.03
PDGFRA-210ENST00000512522 KIF15Q9NS87 1388 aa14.87□□□□□ -0.03
PDGFRA-210ENST00000512522 RICTORQ6R327 1708 aa14.87□□□□□ -0.03
PDGFRA-210ENST00000512522 ANKRD50Q9ULJ7 1429 aa14.86□□□□□ -0.03
PDGFRA-210ENST00000512522 ATP7AQ04656 1500 aa14.86□□□□□ -0.03
PDGFRA-210ENST00000512522 KIDINS220Q9ULH0 1771 aa14.85□□□□□ -0.03
PDGFRA-210ENST00000512522 RAPGEF3O95398 923 aa14.85□□□□□ -0.03
PDGFRA-210ENST00000512522 ACIN1Q9UKV3 1341 aaKnown RBP14.85□□□□□ -0.03
PDGFRA-210ENST00000512522 FRMPD1Q5SYB0 1578 aa14.85□□□□□ -0.03
PDGFRA-210ENST00000512522 DHX57Q6P158 1386 aaKnown RBP14.85□□□□□ -0.03
PDGFRA-210ENST00000512522 COL17A1Q9UMD9 1497 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms