RNA–Protein interactions for RNA: ENST00000512317.5

SPARCL1-207, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-207ENST00000512317 PHF8Q9UPP1 1060 aa9.48□□□□□ -0.89
SPARCL1-207ENST00000512317 NLRP6P59044 892 aa9.47□□□□□ -0.89
SPARCL1-207ENST00000512317 CDAN1Q8IWY9 1227 aa9.47□□□□□ -0.89
SPARCL1-207ENST00000512317 MICALL2Q8IY33 904 aa9.46□□□□□ -0.9
SPARCL1-207ENST00000512317 RGL2O15211 777 aa9.45□□□□□ -0.9
SPARCL1-207ENST00000512317 MS4A4AQ96JQ5 239 aa9.45□□□□□ -0.9
SPARCL1-207ENST00000512317 MARVELD3Q96A59 401 aa9.43□□□□□ -0.9
SPARCL1-207ENST00000512317 NESP48681 1621 aa9.42□□□□□ -0.9
SPARCL1-207ENST00000512317 EMP3P54852 163 aa9.42□□□□□ -0.9
SPARCL1-207ENST00000512317 ATAD2BQ9ULI0 1458 aa9.41□□□□□ -0.9
SPARCL1-207ENST00000512317 DOK7Q18PE1 504 aa9.41□□□□□ -0.9
SPARCL1-207ENST00000512317 ZNF710Q8N1W2 664 aa9.4□□□□□ -0.9
SPARCL1-207ENST00000512317 FBXO22Q8NEZ5 403 aa9.4□□□□□ -0.9
SPARCL1-207ENST00000512317 RIMBP2O15034 1052 aa9.39□□□□□ -0.91
SPARCL1-207ENST00000512317 SMARCA4P51532 1647 aa9.38□□□□□ -0.91
SPARCL1-207ENST00000512317 HOXB3P14651 431 aaPredicted RBP9.38□□□□□ -0.91
SPARCL1-207ENST00000512317 MFRPQ9BY79 579 aa9.38□□□□□ -0.91
SPARCL1-207ENST00000512317 MROH2BQ7Z745 1585 aa9.36□□□□□ -0.91
SPARCL1-207ENST00000512317 NCAPD3P42695 1498 aa9.35□□□□□ -0.91
SPARCL1-207ENST00000512317 TMEM92Q6UXU6 159 aa9.34□□□□□ -0.91
SPARCL1-207ENST00000512317 ERCC6Q03468 1493 aa9.34□□□□□ -0.91
SPARCL1-207ENST00000512317 FAM205CA6NFA0 338 aa9.33□□□□□ -0.92
SPARCL1-207ENST00000512317 HOXB1P14653 301 aaPredicted RBP9.33□□□□□ -0.92
SPARCL1-207ENST00000512317 HS3ST6Q96QI5 342 aa9.32□□□□□ -0.92
SPARCL1-207ENST00000512317 ZSWIM6Q9HCJ5 1215 aa9.31□□□□□ -0.92
SPARCL1-207ENST00000512317 BAZ1BQ9UIG0 1483 aaKnown RBP9.3□□□□□ -0.92
SPARCL1-207ENST00000512317 HS6ST3Q8IZP7 471 aa9.29□□□□□ -0.92
SPARCL1-207ENST00000512317 DNAJC5Q9H3Z4 198 aa9.29□□□□□ -0.92
SPARCL1-207ENST00000512317 HMGXB3Q12766 1538 aa9.29□□□□□ -0.92
SPARCL1-207ENST00000512317 SMARCA2P51531 1590 aa9.28□□□□□ -0.92
SPARCL1-207ENST00000512317 ERBB3P21860 1342 aa9.27□□□□□ -0.93
SPARCL1-207ENST00000512317 BAZ1AQ9NRL2 1556 aaPredicted RBP9.26□□□□□ -0.93
SPARCL1-207ENST00000512317 POTEB3A0JP26 581 aa9.25□□□□□ -0.93
SPARCL1-207ENST00000512317 CHGAP10645 457 aaKnown RBP9.25□□□□□ -0.93
SPARCL1-207ENST00000512317 POTEBQ6S5H4 581 aa9.25□□□□□ -0.93
SPARCL1-207ENST00000512317 THOC2Q8NI27 1593 aaKnown RBP9.24□□□□□ -0.93
SPARCL1-207ENST00000512317 TMC2Q8TDI7 906 aa9.24□□□□□ -0.93
SPARCL1-207ENST00000512317 CUX2O14529 1486 aa9.23□□□□□ -0.93
SPARCL1-207ENST00000512317 C2orf72A6NCS6 295 aa9.23□□□□□ -0.93
SPARCL1-207ENST00000512317 KIF3CO14782 793 aa9.23□□□□□ -0.93
SPARCL1-207ENST00000512317 WIZO95785 1651 aa9.23□□□□□ -0.93
SPARCL1-207ENST00000512317 GPR153Q6NV75 609 aa9.22□□□□□ -0.93
SPARCL1-207ENST00000512317 SPNS2Q8IVW8 549 aa9.22□□□□□ -0.93
SPARCL1-207ENST00000512317 PEG3Q9GZU2 1588 aa9.2□□□□□ -0.94
SPARCL1-207ENST00000512317 KIF21AQ7Z4S6 1674 aa9.2□□□□□ -0.94
SPARCL1-207ENST00000512317 PPP1R37O75864 691 aa9.2□□□□□ -0.94
SPARCL1-207ENST00000512317 VARS2Q5ST30 1063 aaKnown RBP9.2□□□□□ -0.94
SPARCL1-207ENST00000512317 KRTAP3-3Q9BYR6 98 aa9.2□□□□□ -0.94
SPARCL1-207ENST00000512317 KRTAP3-2Q9BYR7 98 aa9.2□□□□□ -0.94
SPARCL1-207ENST00000512317 ARSIQ5FYB1 569 aa9.19□□□□□ -0.94
SPARCL1-207ENST00000512317 RYDENQ9NUL5 291 aaKnown RBP9.19□□□□□ -0.94
SPARCL1-207ENST00000512317 MMRN1Q13201 1228 aa9.18□□□□□ -0.94
SPARCL1-207ENST00000512317 SLC34A2O95436 690 aa9.14□□□□□ -0.95
SPARCL1-207ENST00000512317 ZNF687Q8N1G0 1237 aa9.13□□□□□ -0.95
SPARCL1-207ENST00000512317 KHSRPQ92945 711 aaKnown RBP eCLIP9.13□□□□□ -0.95
SPARCL1-207ENST00000512317 ZNF316A6NFI3 1004 aaPredicted RBP9.12□□□□□ -0.95
SPARCL1-207ENST00000512317 LAMC3Q9Y6N6 1575 aa9.12□□□□□ -0.95
SPARCL1-207ENST00000512317 NKX1-1Q15270 411 aaPredicted RBP9.11□□□□□ -0.95
SPARCL1-207ENST00000512317 PCDHGA4Q9Y5G9 962 aa9.11□□□□□ -0.95
SPARCL1-207ENST00000512317 RSF1Q96T23 1441 aaPredicted RBP9.11□□□□□ -0.95
SPARCL1-207ENST00000512317 CADPSQ9ULU8 1353 aa9.11□□□□□ -0.95
SPARCL1-207ENST00000512317 NUDT7P0C024 238 aa9.1□□□□□ -0.95
SPARCL1-207ENST00000512317 GPHNQ9NQX3 736 aaPredicted RBP9.1□□□□□ -0.95
SPARCL1-207ENST00000512317 FOXK1P85037 733 aa9.09□□□□□ -0.95
SPARCL1-207ENST00000512317 MRC2Q9UBG0 1479 aa9.08□□□□□ -0.96
SPARCL1-207ENST00000512317 PLPP6Q8IY26 295 aa9.07□□□□□ -0.96
SPARCL1-207ENST00000512317 PDS5BQ9NTI5 1447 aa9.06□□□□□ -0.96
SPARCL1-207ENST00000512317 WDR62O43379 1518 aa9.05□□□□□ -0.96
SPARCL1-207ENST00000512317 FANCD2Q9BXW9 1451 aa9.05□□□□□ -0.96
SPARCL1-207ENST00000512317 TBC1D12O60347 775 aa9.04□□□□□ -0.96
SPARCL1-207ENST00000512317 DSG2Q14126 1118 aa9.04□□□□□ -0.96
SPARCL1-207ENST00000512317 PTCD2Q8WV60 388 aaKnown RBP9.04□□□□□ -0.96
SPARCL1-207ENST00000512317 LHX6Q9UPM6 363 aa9.04□□□□□ -0.96
SPARCL1-207ENST00000512317 TOP2AP11388 1531 aaKnown RBP9.04□□□□□ -0.96
SPARCL1-207ENST00000512317 URB2Q14146 1524 aaKnown RBP9.04□□□□□ -0.96
SPARCL1-207ENST00000512317 PSDA5PKW4 1024 aaPredicted RBP9.03□□□□□ -0.96
SPARCL1-207ENST00000512317 CEP164Q9UPV0 1460 aa9.02□□□□□ -0.96
SPARCL1-207ENST00000512317 PBX2P40425 430 aa9.02□□□□□ -0.97
SPARCL1-207ENST00000512317 PTGER2P43116 358 aa9.02□□□□□ -0.97
SPARCL1-207ENST00000512317 GTPBP6O43824 516 aaPredicted RBP9□□□□□ -0.97
SPARCL1-207ENST00000512317 ANKRD13DQ6ZTN6 518 aa9□□□□□ -0.97
SPARCL1-207ENST00000512317 CFTRP13569 1480 aa9□□□□□ -0.97
SPARCL1-207ENST00000512317 PDE4AP27815 886 aa8.99□□□□□ -0.97
SPARCL1-207ENST00000512317 LSM11P83369 360 aaKnown RBP eCLIP8.99□□□□□ -0.97
SPARCL1-207ENST00000512317 RNF166Q96A37 237 aaPredicted RBP8.99□□□□□ -0.97
SPARCL1-207ENST00000512317 CRISPLD2Q9H0B8 497 aa8.99□□□□□ -0.97
SPARCL1-207ENST00000512317 MYT1LQ9UL68 1186 aa8.99□□□□□ -0.97
SPARCL1-207ENST00000512317 CCDC88BA6NC98 1476 aa8.98□□□□□ -0.97
SPARCL1-207ENST00000512317 ZNF608Q9ULD9 1512 aaPredicted RBP8.98□□□□□ -0.97
SPARCL1-207ENST00000512317 PPP1R15BQ5SWA1 713 aa8.97□□□□□ -0.97
SPARCL1-207ENST00000512317 KDM4FA0A1W2PPD8 638 aa8.96□□□□□ -0.98
SPARCL1-207ENST00000512317 PPP4R3BQ5MIZ7 849 aa8.94□□□□□ -0.98
SPARCL1-207ENST00000512317 NCKAP5LQ9HCH0 1330 aa8.94□□□□□ -0.98
SPARCL1-207ENST00000512317 ARHGAP33O14559 1287 aa8.93□□□□□ -0.98
SPARCL1-207ENST00000512317 OXER1Q8TDS5 423 aa8.93□□□□□ -0.98
SPARCL1-207ENST00000512317 UPF1Q92900 1129 aaKnown RBP eCLIP8.93□□□□□ -0.98
SPARCL1-207ENST00000512317 AXIN2Q9Y2T1 843 aa8.93□□□□□ -0.98
SPARCL1-207ENST00000512317 POTEEQ6S8J3 1075 aa8.91□□□□□ -0.98
SPARCL1-207ENST00000512317 DDX27Q96GQ7 796 aaKnown RBP8.91□□□□□ -0.98
SPARCL1-207ENST00000512317 LARP6Q9BRS8 491 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms