RNA–Protein interactions for RNA: ENST00000512221.2

PCDH12-203, Transcript of protocadherin 12, humanhuman

TSL 3

Gene PCDH12, Length 467 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12-203ENST00000512221 STRCQ7RTU9 1775 aa12.57□□□□□ -0.4
PCDH12-203ENST00000512221 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.57□□□□□ -0.4
PCDH12-203ENST00000512221 HNRNPUL2Q1KMD3 747 aaKnown RBP12.57□□□□□ -0.4
PCDH12-203ENST00000512221 PLCH2O75038 1416 aa12.56□□□□□ -0.4
PCDH12-203ENST00000512221 C9orf84Q5VXU9 1444 aa12.56□□□□□ -0.4
PCDH12-203ENST00000512221 ABCA6Q8N139 1617 aa12.56□□□□□ -0.4
PCDH12-203ENST00000512221 DIP2CQ9Y2E4 1556 aa12.56□□□□□ -0.4
PCDH12-203ENST00000512221 CDC42BPBQ9Y5S2 1711 aa12.55□□□□□ -0.4
PCDH12-203ENST00000512221 PREX2Q70Z35 1606 aa12.55□□□□□ -0.4
PCDH12-203ENST00000512221 PLEKHD1A6NEE1 506 aa12.54□□□□□ -0.4
PCDH12-203ENST00000512221 C3P01024 1663 aa12.54□□□□□ -0.4
PCDH12-203ENST00000512221 SCAPERQ9BY12 1400 aa12.54□□□□□ -0.4
PCDH12-203ENST00000512221 HSPA2P54652 639 aa12.53□□□□□ -0.4
PCDH12-203ENST00000512221 ITSN2Q9NZM3 1697 aa12.53□□□□□ -0.4
PCDH12-203ENST00000512221 ATP10AO60312 1499 aa12.53□□□□□ -0.4
PCDH12-203ENST00000512221 ZNF518AQ6AHZ1 1483 aa12.53□□□□□ -0.4
PCDH12-203ENST00000512221 ARHGAP35Q9NRY4 1499 aa12.53□□□□□ -0.4
PCDH12-203ENST00000512221 FMN1Q68DA7 1419 aa12.51□□□□□ -0.41
PCDH12-203ENST00000512221 ABCC1P33527 1531 aa12.51□□□□□ -0.41
PCDH12-203ENST00000512221 RANGAP1P46060 587 aaPredicted RBP12.5□□□□□ -0.41
PCDH12-203ENST00000512221 ARHGAP5Q13017 1502 aa12.5□□□□□ -0.41
PCDH12-203ENST00000512221 CDC42BPAQ5VT25 1732 aa12.49□□□□□ -0.41
PCDH12-203ENST00000512221 TROQ12816 1431 aaPredicted RBP12.48□□□□□ -0.41
PCDH12-203ENST00000512221 KIDINS220Q9ULH0 1771 aa12.48□□□□□ -0.41
PCDH12-203ENST00000512221 SETD1BQ9UPS6 1966 aaKnown RBP12.47□□□□□ -0.41
PCDH12-203ENST00000512221 AGLP35573 1532 aa12.47□□□□□ -0.41
PCDH12-203ENST00000512221 MROH2AA6NES4 1674 aa12.45□□□□□ -0.42
PCDH12-203ENST00000512221 MLH3Q9UHC1 1453 aa12.45□□□□□ -0.42
PCDH12-203ENST00000512221 UHRF1BP1Q6BDS2 1440 aa12.45□□□□□ -0.42
PCDH12-203ENST00000512221 MLECQ14165 292 aa12.44□□□□□ -0.42
PCDH12-203ENST00000512221 CERKQ8TCT0 537 aa12.44□□□□□ -0.42
PCDH12-203ENST00000512221 PLPPR3Q6T4P5 718 aa12.43□□□□□ -0.42
PCDH12-203ENST00000512221 CLIP1P30622 1438 aa12.43□□□□□ -0.42
PCDH12-203ENST00000512221 ZNF142P52746 1687 aaPredicted RBP12.42□□□□□ -0.42
PCDH12-203ENST00000512221 SPATA31D1Q6ZQQ2 1576 aa12.42□□□□□ -0.42
PCDH12-203ENST00000512221 CCDC18Q5T9S5 1454 aa12.41□□□□□ -0.42
PCDH12-203ENST00000512221 LTBP4Q8N2S1 1624 aa12.41□□□□□ -0.42
PCDH12-203ENST00000512221 SAMD9LQ8IVG5 1584 aa12.41□□□□□ -0.42
PCDH12-203ENST00000512221 INO80Q9ULG1 1556 aaPredicted RBP12.4□□□□□ -0.42
PCDH12-203ENST00000512221 EFCAB2Q5VUJ9 269 aa12.4□□□□□ -0.42
PCDH12-203ENST00000512221 PLXNC1O60486 1568 aa12.39□□□□□ -0.43
PCDH12-203ENST00000512221 TRAPPC8Q9Y2L5 1435 aa12.39□□□□□ -0.43
PCDH12-203ENST00000512221 MYO3AQ8NEV4 1616 aa12.39□□□□□ -0.43
PCDH12-203ENST00000512221 PTPRTO14522 1441 aa12.38□□□□□ -0.43
PCDH12-203ENST00000512221 NCOA1Q15788 1441 aa12.37□□□□□ -0.43
PCDH12-203ENST00000512221 CASKIN1Q8WXD9 1431 aa12.37□□□□□ -0.43
PCDH12-203ENST00000512221 SYCP2Q9BX26 1530 aa12.37□□□□□ -0.43
PCDH12-203ENST00000512221 SUPT6HQ7KZ85 1726 aaKnown RBP12.37□□□□□ -0.43
PCDH12-203ENST00000512221 CEBPAP49715 358 aaPredicted RBP12.37□□□□□ -0.43
PCDH12-203ENST00000512221 IQSEC2Q5JU85 1478 aa12.37□□□□□ -0.43
PCDH12-203ENST00000512221 CLTCQ00610 1675 aaKnown RBP12.36□□□□□ -0.43
PCDH12-203ENST00000512221 FYCO1Q9BQS8 1478 aa12.36□□□□□ -0.43
PCDH12-203ENST00000512221 AFAP1Q8N556 730 aa12.36□□□□□ -0.43
PCDH12-203ENST00000512221 CNTLNQ9NXG0 1405 aa12.36□□□□□ -0.43
PCDH12-203ENST00000512221 CDK11AQ9UQ88 783 aaPredicted RBP12.35□□□□□ -0.43
PCDH12-203ENST00000512221 CAMSAP1Q5T5Y3 1602 aa12.34□□□□□ -0.43
PCDH12-203ENST00000512221 ATP7AQ04656 1500 aa12.34□□□□□ -0.43
PCDH12-203ENST00000512221 NPATQ14207 1427 aa12.33□□□□□ -0.44
PCDH12-203ENST00000512221 ADGBQ8N7X0 1667 aa12.32□□□□□ -0.44
PCDH12-203ENST00000512221 CEP170BQ9Y4F5 1589 aaPredicted RBP12.32□□□□□ -0.44
PCDH12-203ENST00000512221 UBTFP17480 764 aaKnown RBP12.31□□□□□ -0.44
PCDH12-203ENST00000512221 ATP1B4Q9UN42 357 aaPredicted RBP12.31□□□□□ -0.44
PCDH12-203ENST00000512221 DMRT2Q9Y5R5 561 aa12.31□□□□□ -0.44
PCDH12-203ENST00000512221 POLR1AO95602 1720 aaPredicted RBP12.3□□□□□ -0.44
PCDH12-203ENST00000512221 DISP3Q9P2K9 1392 aa12.3□□□□□ -0.44
PCDH12-203ENST00000512221 PLA2R1Q13018 1463 aa12.29□□□□□ -0.44
PCDH12-203ENST00000512221 GPATCH8Q9UKJ3 1502 aaKnown RBP12.29□□□□□ -0.44
PCDH12-203ENST00000512221 ILDR2Q71H61 639 aa12.28□□□□□ -0.44
PCDH12-203ENST00000512221 TCOF1Q13428 1488 aaKnown RBP12.27□□□□□ -0.44
PCDH12-203ENST00000512221 TIAM1Q13009 1591 aa12.27□□□□□ -0.44
PCDH12-203ENST00000512221 EHMT2Q96KQ7 1210 aa12.27□□□□□ -0.45
PCDH12-203ENST00000512221 PLEKHH2Q8IVE3 1493 aa12.26□□□□□ -0.45
PCDH12-203ENST00000512221 KIAA1107Q9UPP5 1409 aa12.25□□□□□ -0.45
PCDH12-203ENST00000512221 A2MP01023 1474 aa12.25□□□□□ -0.45
PCDH12-203ENST00000512221 PTPRKQ15262 1439 aa12.24□□□□□ -0.45
PCDH12-203ENST00000512221 NEURL4Q96JN8 1562 aa12.24□□□□□ -0.45
PCDH12-203ENST00000512221 MYT1LQ9UL68 1186 aa12.24□□□□□ -0.45
PCDH12-203ENST00000512221 DNMT1P26358 1616 aaKnown RBP12.23□□□□□ -0.45
PCDH12-203ENST00000512221 EHBP1L1Q8N3D4 1523 aa12.23□□□□□ -0.45
PCDH12-203ENST00000512221 ZMYM3Q14202 1370 aa12.22□□□□□ -0.45
PCDH12-203ENST00000512221 SOCS7O14512 581 aa12.22□□□□□ -0.45
PCDH12-203ENST00000512221 FAM135AQ9P2D6 1515 aa12.21□□□□□ -0.45
PCDH12-203ENST00000512221 ESF1Q9H501 851 aaKnown RBP12.21□□□□□ -0.45
PCDH12-203ENST00000512221 SPAG9O60271 1321 aaKnown RBP12.2□□□□□ -0.46
PCDH12-203ENST00000512221 CHIC1Q5VXU3 224 aa12.2□□□□□ -0.46
PCDH12-203ENST00000512221 A2ML1A8K2U0 1454 aa12.19□□□□□ -0.46
PCDH12-203ENST00000512221 MBD5Q9P267 1494 aa12.19□□□□□ -0.46
PCDH12-203ENST00000512221 ZNF335Q9H4Z2 1342 aaPredicted RBP12.18□□□□□ -0.46
PCDH12-203ENST00000512221 KDM5DQ9BY66 1539 aa12.18□□□□□ -0.46
PCDH12-203ENST00000512221 MED1Q15648 1581 aaPredicted RBP12.17□□□□□ -0.46
PCDH12-203ENST00000512221 RNF17Q9BXT8 1623 aaKnown RBP12.15□□□□□ -0.46
PCDH12-203ENST00000512221 ALKQ9UM73 1620 aa12.15□□□□□ -0.46
PCDH12-203ENST00000512221 PZPP20742 1482 aa12.15□□□□□ -0.46
PCDH12-203ENST00000512221 NCKAP5LQ9HCH0 1330 aa12.15□□□□□ -0.46
PCDH12-203ENST00000512221 VWDEQ8N2E2 1590 aa12.15□□□□□ -0.46
PCDH12-203ENST00000512221 HNRNPMP52272 730 aaKnown RBP eCLIP12.15□□□□□ -0.46
PCDH12-203ENST00000512221 ZNF777Q9ULD5 760 aaPredicted RBP12.15□□□□□ -0.46
PCDH12-203ENST00000512221 ZC3H13Q5T200 1668 aaKnown RBP12.15□□□□□ -0.46
PCDH12-203ENST00000512221 CPS1P31327 1500 aa12.15□□□□□ -0.46
PCDH12-203ENST00000512221 CCNB3Q8WWL7 1395 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms