RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, humanhuman

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-238ENST00000512107 ARHGAP5Q13017 1502 aa22.67■■□□□ 1.22
MATR3-238ENST00000512107 ZNF644Q9H582 1327 aaPredicted RBP22.66■■□□□ 1.22
MATR3-238ENST00000512107 SAMD9LQ8IVG5 1584 aa22.66■■□□□ 1.22
MATR3-238ENST00000512107 ARAP3Q8WWN8 1544 aa22.66■■□□□ 1.22
MATR3-238ENST00000512107 FANCAO15360 1455 aa22.65■■□□□ 1.22
MATR3-238ENST00000512107 MYOM3Q5VTT5 1437 aa22.64■■□□□ 1.21
MATR3-238ENST00000512107 ARHGEF12Q9NZN5 1544 aa22.63■■□□□ 1.21
MATR3-238ENST00000512107 ITSN2Q9NZM3 1697 aa22.63■■□□□ 1.21
MATR3-238ENST00000512107 AKNAQ7Z591 1439 aa22.62■■□□□ 1.21
MATR3-238ENST00000512107 TEX14Q8IWB6 1497 aa22.6■■□□□ 1.21
MATR3-238ENST00000512107 CFDP1Q9UEE9 299 aaPredicted RBP22.6■■□□□ 1.21
MATR3-238ENST00000512107 NEO1Q92859 1461 aa22.6■■□□□ 1.21
MATR3-238ENST00000512107 EFCAB2Q5VUJ9 269 aa22.59■■□□□ 1.21
MATR3-238ENST00000512107 ZNF777Q9ULD5 760 aaPredicted RBP22.59■■□□□ 1.21
MATR3-238ENST00000512107 ABCC1P33527 1531 aa22.57■■□□□ 1.2
MATR3-238ENST00000512107 FGD6Q6ZV73 1430 aa22.57■■□□□ 1.2
MATR3-238ENST00000512107 FRMPD1Q5SYB0 1578 aa22.56■■□□□ 1.2
MATR3-238ENST00000512107 CFAP74Q9C0B2 1584 aa22.56■■□□□ 1.2
MATR3-238ENST00000512107 CAMSAP2Q08AD1 1489 aa22.55■■□□□ 1.2
MATR3-238ENST00000512107 PTPN23Q9H3S7 1636 aa22.55■■□□□ 1.2
MATR3-238ENST00000512107 ADGRL1O94910 1474 aa22.54■■□□□ 1.2
MATR3-238ENST00000512107 SYCP2Q9BX26 1530 aa22.53■■□□□ 1.2
MATR3-238ENST00000512107 MIA2Q96PC5 1412 aa22.53■■□□□ 1.2
MATR3-238ENST00000512107 SCAPERQ9BY12 1400 aa22.53■■□□□ 1.2
MATR3-238ENST00000512107 TRAPPC8Q9Y2L5 1435 aa22.53■■□□□ 1.2
MATR3-238ENST00000512107 HNRNPMP52272 730 aaKnown RBP eCLIP22.52■■□□□ 1.24e-9■■■■■ 28.9
MATR3-238ENST00000512107 TCOF1Q13428 1488 aaKnown RBP22.52■■□□□ 1.2
MATR3-238ENST00000512107 MBD5Q9P267 1494 aa22.52■■□□□ 1.2
MATR3-238ENST00000512107 RICTORQ6R327 1708 aa22.51■■□□□ 1.19
MATR3-238ENST00000512107 KDM6BO15054 1643 aa22.51■■□□□ 1.19
MATR3-238ENST00000512107 RAPGEF3O95398 923 aa22.51■■□□□ 1.19
MATR3-238ENST00000512107 AFAP1Q8N556 730 aa22.47■■□□□ 1.19
MATR3-238ENST00000512107 POGZQ7Z3K3 1410 aa22.47■■□□□ 1.19
MATR3-238ENST00000512107 DENND4BO75064 1496 aaPredicted RBP22.47■■□□□ 1.19
MATR3-238ENST00000512107 RRBP1Q9P2E9 1410 aaKnown RBP22.46■■□□□ 1.19
MATR3-238ENST00000512107 KIAA1107Q9UPP5 1409 aa22.46■■□□□ 1.19
MATR3-238ENST00000512107 ILDR1Q86SU0 546 aaPredicted RBP22.43■■□□□ 1.18
MATR3-238ENST00000512107 KDM5CP41229 1560 aa22.42■■□□□ 1.18
MATR3-238ENST00000512107 PLEKHH2Q8IVE3 1493 aa22.41■■□□□ 1.18
MATR3-238ENST00000512107 ARHGEF5Q12774 1597 aa22.41■■□□□ 1.18
MATR3-238ENST00000512107 ABCC5O15440 1437 aa22.4■■□□□ 1.18
MATR3-238ENST00000512107 PTPRKQ15262 1439 aa22.4■■□□□ 1.18
MATR3-238ENST00000512107 FAM50AQ14320 339 aaKnown RBP22.4■■□□□ 1.18
MATR3-238ENST00000512107 DNMT1P26358 1616 aaKnown RBP22.38■■□□□ 1.17
MATR3-238ENST00000512107 ZMYM4Q5VZL5 1548 aa22.37■■□□□ 1.17
MATR3-238ENST00000512107 YEATS2Q9ULM3 1422 aa22.37■■□□□ 1.17
MATR3-238ENST00000512107 CROCC2H7BZ55 1655 aa22.36■■□□□ 1.17
MATR3-238ENST00000512107 ZNF518AQ6AHZ1 1483 aa22.36■■□□□ 1.17
MATR3-238ENST00000512107 CCDC141Q6ZP82 1450 aa22.36■■□□□ 1.17
MATR3-238ENST00000512107 KIDINS220Q9ULH0 1771 aa22.36■■□□□ 1.17
MATR3-238ENST00000512107 DAPK1P53355 1430 aa22.36■■□□□ 1.17
MATR3-238ENST00000512107 INO80Q9ULG1 1556 aaPredicted RBP22.34■■□□□ 1.17
MATR3-238ENST00000512107 SIGLEC1Q9BZZ2 1709 aa22.33■■□□□ 1.17
MATR3-238ENST00000512107 ZFYVE16Q7Z3T8 1539 aa22.32■■□□□ 1.16
MATR3-238ENST00000512107 HECW2Q9P2P5 1572 aa22.32■■□□□ 1.16
MATR3-238ENST00000512107 ABCA6Q8N139 1617 aa22.31■■□□□ 1.16
MATR3-238ENST00000512107 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.31■■□□□ 1.165e-19■■□□□ 13.5
MATR3-238ENST00000512107 MLH3Q9UHC1 1453 aa22.3■■□□□ 1.16
MATR3-238ENST00000512107 MAST1Q9Y2H9 1570 aa22.29■■□□□ 1.16
MATR3-238ENST00000512107 ITGAEP38570 1179 aa22.29■■□□□ 1.16
MATR3-238ENST00000512107 ATP7AQ04656 1500 aa22.29■■□□□ 1.16
MATR3-238ENST00000512107 DIP2CQ9Y2E4 1556 aa22.29■■□□□ 1.16
MATR3-238ENST00000512107 SPAG9O60271 1321 aaKnown RBP22.29■■□□□ 1.16
MATR3-238ENST00000512107 CHIC2Q9UKJ5 165 aa22.28■■□□□ 1.16
MATR3-238ENST00000512107 C9orf84Q5VXU9 1444 aa22.28■■□□□ 1.16
MATR3-238ENST00000512107 ARHGEF40Q8TER5 1519 aa22.26■■□□□ 1.15
MATR3-238ENST00000512107 SHANK2Q9UPX8 1470 aa22.25■■□□□ 1.15
MATR3-238ENST00000512107 ADGBQ8N7X0 1667 aa22.25■■□□□ 1.15
MATR3-238ENST00000512107 RSPH4AQ5TD94 716 aa22.24■■□□□ 1.15
MATR3-238ENST00000512107 MAGI2Q86UL8 1455 aa22.23■■□□□ 1.15
MATR3-238ENST00000512107 RTEL1-TNFRSF6BF6WH68 1400 aa22.23■■□□□ 1.15
MATR3-238ENST00000512107 TSPY4P0CV99 314 aa22.2■■□□□ 1.14
MATR3-238ENST00000512107 TSPY10P0CW01 314 aa22.2■■□□□ 1.14
MATR3-238ENST00000512107 MYT1LQ9UL68 1186 aa22.2■■□□□ 1.14
MATR3-238ENST00000512107 ADGRL2O95490 1459 aa22.2■■□□□ 1.14
MATR3-238ENST00000512107 PLXNC1O60486 1568 aa22.19■■□□□ 1.14
MATR3-238ENST00000512107 ATP10AO60312 1499 aa22.18■■□□□ 1.14
MATR3-238ENST00000512107 NCOA1Q15788 1441 aa22.18■■□□□ 1.14
MATR3-238ENST00000512107 RRP7BPQ9NSQ0 103 aa22.17■■□□□ 1.14
MATR3-238ENST00000512107 A2MP01023 1474 aa22.14■■□□□ 1.13
MATR3-238ENST00000512107 KIF15Q9NS87 1388 aa22.12■■□□□ 1.13
MATR3-238ENST00000512107 REREQ9P2R6 1566 aa22.12■■□□□ 1.13
MATR3-238ENST00000512107 ROCK1Q13464 1354 aa22.11■■□□□ 1.13
MATR3-238ENST00000512107 DHX29Q7Z478 1369 aaKnown RBP22.11■■□□□ 1.13
MATR3-238ENST00000512107 ANKRD30AQ9BXX3 1397 aa22.11■■□□□ 1.13
MATR3-238ENST00000512107 NAIPQ13075 1403 aa22.07■■□□□ 1.12
MATR3-238ENST00000512107 DUOX2Q9NRD8 1548 aa22.07■■□□□ 1.12
MATR3-238ENST00000512107 AGLP35573 1532 aa22.06■■□□□ 1.12
MATR3-238ENST00000512107 GCC2Q8IWJ2 1684 aa22.05■■□□□ 1.12
MATR3-238ENST00000512107 TRIM26Q12899 539 aaPredicted RBP22.05■■□□□ 1.12
MATR3-238ENST00000512107 MROH1Q8NDA8 1641 aa22.03■■□□□ 1.12
MATR3-238ENST00000512107 BCORL1Q5H9F3 1711 aa22.03■■□□□ 1.12
MATR3-238ENST00000512107 HFM1A2PYH4 1435 aa22.02■■□□□ 1.12
MATR3-238ENST00000512107 ANKRD50Q9ULJ7 1429 aa22.01■■□□□ 1.11
MATR3-238ENST00000512107 MLECQ14165 292 aa22.01■■□□□ 1.11
MATR3-238ENST00000512107 EIF2AK4Q9P2K8 1649 aaKnown RBP21.99■■□□□ 1.11
MATR3-238ENST00000512107 ERBINQ96RT1 1412 aa21.99■■□□□ 1.11
MATR3-238ENST00000512107 KIF3BO15066 747 aa21.99■■□□□ 1.11
MATR3-238ENST00000512107 ARID4BQ4LE39 1312 aaPredicted RBP21.99■■□□□ 1.11
MATR3-238ENST00000512107 RNF17Q9BXT8 1623 aaKnown RBP21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms