RNA–Protein interactions for RNA: ENST00000511898.1

BRD8-223, Transcript of bromodomain containing 8, human

TSL 5

Gene BRD8, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRD8-223	ENST00000511898	GPATCH8	Q9UKJ3	1502 aa	Known RBP	12.22	□□□□□ -0.45
BRD8-223	ENST00000511898	POGZ	Q7Z3K3	1410 aa		12.22	□□□□□ -0.45
BRD8-223	ENST00000511898	RICTOR	Q6R327	1708 aa		12.22	□□□□□ -0.45
BRD8-223	ENST00000511898	CFAP74	Q9C0B2	1584 aa		12.22	□□□□□ -0.45
BRD8-223	ENST00000511898	ARHGEF12	Q9NZN5	1544 aa		12.21	□□□□□ -0.45
BRD8-223	ENST00000511898	VPS8	Q8N3P4	1428 aa		12.21	□□□□□ -0.45
BRD8-223	ENST00000511898	MTUS2	Q5JR59	1369 aa		12.21	□□□□□ -0.45
BRD8-223	ENST00000511898	ARHGAP5	Q13017	1502 aa		12.21	□□□□□ -0.46
BRD8-223	ENST00000511898	MAGI2	Q86UL8	1455 aa		12.21	□□□□□ -0.46
BRD8-223	ENST00000511898	YEATS2	Q9ULM3	1422 aa		12.2	□□□□□ -0.46
BRD8-223	ENST00000511898	MYO5C	Q9NQX4	1742 aa		12.2	□□□□□ -0.46
BRD8-223	ENST00000511898	ZMYM4	Q5VZL5	1548 aa		12.2	□□□□□ -0.46
BRD8-223	ENST00000511898	CDC42BPB	Q9Y5S2	1711 aa		12.2	□□□□□ -0.46
BRD8-223	ENST00000511898	TRAPPC8	Q9Y2L5	1435 aa		12.19	□□□□□ -0.46
BRD8-223	ENST00000511898	KANK4	Q5T7N3	995 aa	Predicted RBP	12.18	□□□□□ -0.46
BRD8-223	ENST00000511898	CFDP1	Q9UEE9	299 aa	Predicted RBP	12.18	□□□□□ -0.46
BRD8-223	ENST00000511898	CCNB3	Q8WWL7	1395 aa		12.18	□□□□□ -0.46
BRD8-223	ENST00000511898	HNRNPM	P52272	730 aa	Known RBP eCLIP	12.17	□□□□□ -0.46
BRD8-223	ENST00000511898	ZNF777	Q9ULD5	760 aa	Predicted RBP	12.17	□□□□□ -0.46
BRD8-223	ENST00000511898	ZNF644	Q9H582	1327 aa	Predicted RBP	12.16	□□□□□ -0.46
BRD8-223	ENST00000511898	ZNF518A	Q6AHZ1	1483 aa		12.16	□□□□□ -0.46
BRD8-223	ENST00000511898	PREX2	Q70Z35	1606 aa		12.16	□□□□□ -0.46
BRD8-223	ENST00000511898	ARID4B	Q4LE39	1312 aa	Predicted RBP	12.15	□□□□□ -0.46
BRD8-223	ENST00000511898	CDC42BPA	Q5VT25	1732 aa		12.15	□□□□□ -0.46
BRD8-223	ENST00000511898	KIAA1107	Q9UPP5	1409 aa		12.15	□□□□□ -0.46
BRD8-223	ENST00000511898	ZFYVE16	Q7Z3T8	1539 aa		12.15	□□□□□ -0.46
BRD8-223	ENST00000511898	ARHGEF40	Q8TER5	1519 aa		12.15	□□□□□ -0.46
BRD8-223	ENST00000511898	ATP10A	O60312	1499 aa		12.14	□□□□□ -0.47
BRD8-223	ENST00000511898	MLH3	Q9UHC1	1453 aa		12.14	□□□□□ -0.47
BRD8-223	ENST00000511898	KDM5C	P41229	1560 aa		12.14	□□□□□ -0.47
BRD8-223	ENST00000511898	ABCC1	P33527	1531 aa		12.14	□□□□□ -0.47
BRD8-223	ENST00000511898	TIAM1	Q13009	1591 aa		12.13	□□□□□ -0.47
BRD8-223	ENST00000511898	MAP3K1	Q13233	1512 aa		12.13	□□□□□ -0.47
BRD8-223	ENST00000511898	EHBP1L1	Q8N3D4	1523 aa		12.13	□□□□□ -0.47
BRD8-223	ENST00000511898	NCOA2	Q15596	1464 aa		12.13	□□□□□ -0.47
BRD8-223	ENST00000511898	LRRC9	Q6ZRR7	1453 aa		12.13	□□□□□ -0.47
BRD8-223	ENST00000511898	SAMD9L	Q8IVG5	1584 aa		12.13	□□□□□ -0.47
BRD8-223	ENST00000511898	ADAMTSL3	P82987	1691 aa		12.12	□□□□□ -0.47
BRD8-223	ENST00000511898	SIGLEC1	Q9BZZ2	1709 aa		12.11	□□□□□ -0.47
BRD8-223	ENST00000511898	MBD5	Q9P267	1494 aa		12.11	□□□□□ -0.47
BRD8-223	ENST00000511898	C9orf84	Q5VXU9	1444 aa		12.1	□□□□□ -0.47
BRD8-223	ENST00000511898	PTPRM	P28827	1452 aa		12.09	□□□□□ -0.47
BRD8-223	ENST00000511898	PLEKHH2	Q8IVE3	1493 aa		12.09	□□□□□ -0.47
BRD8-223	ENST00000511898	BCORL1	Q5H9F3	1711 aa		12.09	□□□□□ -0.47
BRD8-223	ENST00000511898	MLEC	Q14165	292 aa		12.09	□□□□□ -0.47
BRD8-223	ENST00000511898	SPAG9	O60271	1321 aa	Known RBP	12.09	□□□□□ -0.47
BRD8-223	ENST00000511898	SYCP2	Q9BX26	1530 aa		12.08	□□□□□ -0.48
BRD8-223	ENST00000511898	ITSN2	Q9NZM3	1697 aa		12.08	□□□□□ -0.48
BRD8-223	ENST00000511898	MYT1L	Q9UL68	1186 aa		12.08	□□□□□ -0.48
BRD8-223	ENST00000511898	DIP2C	Q9Y2E4	1556 aa		12.07	□□□□□ -0.48
BRD8-223	ENST00000511898	HECW2	Q9P2P5	1572 aa		12.06	□□□□□ -0.48
BRD8-223	ENST00000511898	RSPH4A	Q5TD94	716 aa		12.06	□□□□□ -0.48
BRD8-223	ENST00000511898	RERE	Q9P2R6	1566 aa		12.05	□□□□□ -0.48
BRD8-223	ENST00000511898	KIDINS220	Q9ULH0	1771 aa		12.05	□□□□□ -0.48
BRD8-223	ENST00000511898	SUPT6H	Q7KZ85	1726 aa	Known RBP	12.05	□□□□□ -0.48
BRD8-223	ENST00000511898	ABCA6	Q8N139	1617 aa		12.04	□□□□□ -0.48
BRD8-223	ENST00000511898	MADD	Q8WXG6	1647 aa		12.04	□□□□□ -0.48
BRD8-223	ENST00000511898	APLP2	Q06481	763 aa		12.04	□□□□□ -0.48
BRD8-223	ENST00000511898	AGL	P35573	1532 aa		12.04	□□□□□ -0.48
BRD8-223	ENST00000511898	RTEL1-TNFRSF6B	F6WH68	1400 aa		12.03	□□□□□ -0.48
BRD8-223	ENST00000511898	MYOM3	Q5VTT5	1437 aa		12.02	□□□□□ -0.49
BRD8-223	ENST00000511898	MIA2	Q96PC5	1412 aa		12.02	□□□□□ -0.49
BRD8-223	ENST00000511898	CAMSAP2	Q08AD1	1489 aa		12.02	□□□□□ -0.49
BRD8-223	ENST00000511898	CEBPA	P49715	358 aa	Predicted RBP	12.01	□□□□□ -0.49
BRD8-223	ENST00000511898	ATP7A	Q04656	1500 aa		12.01	□□□□□ -0.49
BRD8-223	ENST00000511898	INO80	Q9ULG1	1556 aa	Predicted RBP	12	□□□□□ -0.49
BRD8-223	ENST00000511898	TSPY4	P0CV99	314 aa		11.99	□□□□□ -0.49
BRD8-223	ENST00000511898	TSPY10	P0CW01	314 aa		11.99	□□□□□ -0.49
BRD8-223	ENST00000511898	DHX29	Q7Z478	1369 aa	Known RBP	11.99	□□□□□ -0.49
BRD8-223	ENST00000511898	A2M	P01023	1474 aa		11.99	□□□□□ -0.49
BRD8-223	ENST00000511898	CCDC141	Q6ZP82	1450 aa		11.99	□□□□□ -0.49
BRD8-223	ENST00000511898	FOXD1	Q16676	465 aa		11.98	□□□□□ -0.49
BRD8-223	ENST00000511898	RIMS1	Q86UR5	1692 aa	Known RBP	11.97	□□□□□ -0.49
BRD8-223	ENST00000511898	PLXNC1	O60486	1568 aa		11.96	□□□□□ -0.49
BRD8-223	ENST00000511898	ARHGEF5	Q12774	1597 aa		11.96	□□□□□ -0.49
BRD8-223	ENST00000511898	GGT6	Q6P531	493 aa		11.95	□□□□□ -0.5
BRD8-223	ENST00000511898	PPP6R1	Q9UPN7	881 aa		11.95	□□□□□ -0.5
BRD8-223	ENST00000511898	LMTK3	Q96Q04	1460 aa		11.95	□□□□□ -0.5
BRD8-223	ENST00000511898	ABCC5	O15440	1437 aa		11.94	□□□□□ -0.5
BRD8-223	ENST00000511898	FGD6	Q6ZV73	1430 aa		11.94	□□□□□ -0.5
BRD8-223	ENST00000511898	ZMYM3	Q14202	1370 aa		11.93	□□□□□ -0.5
BRD8-223	ENST00000511898	FER1L4	A9Z1Z3	1794 aa		11.93	□□□□□ -0.5
BRD8-223	ENST00000511898	KIF3B	O15066	747 aa		11.93	□□□□□ -0.5
BRD8-223	ENST00000511898	ESF1	Q9H501	851 aa	Known RBP	11.93	□□□□□ -0.5
BRD8-223	ENST00000511898	TCOF1	Q13428	1488 aa	Known RBP	11.93	□□□□□ -0.5
BRD8-223	ENST00000511898	HSPA2	P54652	639 aa		11.92	□□□□□ -0.5
BRD8-223	ENST00000511898	CNTLN	Q9NXG0	1405 aa		11.92	□□□□□ -0.5
BRD8-223	ENST00000511898	MAST1	Q9Y2H9	1570 aa		11.9	□□□□□ -0.5
BRD8-223	ENST00000511898	ADGB	Q8N7X0	1667 aa		11.9	□□□□□ -0.5
BRD8-223	ENST00000511898	PTPN23	Q9H3S7	1636 aa		11.89	□□□□□ -0.51
BRD8-223	ENST00000511898	DAPK1	P53355	1430 aa		11.88	□□□□□ -0.51
BRD8-223	ENST00000511898	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.88	□□□□□ -0.51
BRD8-223	ENST00000511898	RRP7BP	Q9NSQ0	103 aa		11.88	□□□□□ -0.51
BRD8-223	ENST00000511898	SETD1B	Q9UPS6	1966 aa	Known RBP	11.87	□□□□□ -0.51
BRD8-223	ENST00000511898	ADRA2B	P18089	450 aa		11.87	□□□□□ -0.51
BRD8-223	ENST00000511898	NPAT	Q14207	1427 aa		11.86	□□□□□ -0.51
BRD8-223	ENST00000511898	PTPRK	Q15262	1439 aa		11.86	□□□□□ -0.51
BRD8-223	ENST00000511898	CHIC2	Q9UKJ5	165 aa		11.86	□□□□□ -0.51
BRD8-223	ENST00000511898	SHANK2	Q9UPX8	1470 aa		11.86	□□□□□ -0.51
BRD8-223	ENST00000511898	C3	P01024	1663 aa		11.86	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms