RNA–Protein interactions for RNA: ENST00000511391.1

ARRDC3-206, Transcript of arrestin domain containing 3, humanhuman

TSL 2

Gene ARRDC3, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3-206ENST00000511391 SOX12O15370 315 aa13.76□□□□□ -0.21
ARRDC3-206ENST00000511391 KHSRPQ92945 711 aaKnown RBP eCLIP13.76□□□□□ -0.21
ARRDC3-206ENST00000511391 PHF8Q9UPP1 1060 aa13.76□□□□□ -0.21
ARRDC3-206ENST00000511391 RNF25Q96BH1 459 aaPredicted RBP13.75□□□□□ -0.21
ARRDC3-206ENST00000511391 ANKRD13DQ6ZTN6 518 aa13.74□□□□□ -0.21
ARRDC3-206ENST00000511391 ZNF316A6NFI3 1004 aaPredicted RBP13.73□□□□□ -0.21
ARRDC3-206ENST00000511391 LSM11P83369 360 aaKnown RBP eCLIP13.72□□□□□ -0.21
ARRDC3-206ENST00000511391 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.7□□□□□ -0.22
ARRDC3-206ENST00000511391 ZFP91Q96JP5 570 aaPredicted RBP13.7□□□□□ -0.22
ARRDC3-206ENST00000511391 RIOK3O14730 519 aaKnown RBP13.68□□□□□ -0.22
ARRDC3-206ENST00000511391 POTEEQ6S8J3 1075 aa13.63□□□□□ -0.23
ARRDC3-206ENST00000511391 VGFO15240 615 aaPredicted RBP13.61□□□□□ -0.23
ARRDC3-206ENST00000511391 FBXO22Q8NEZ5 403 aa13.61□□□□□ -0.23
ARRDC3-206ENST00000511391 KIF3CO14782 793 aa13.59□□□□□ -0.23
ARRDC3-206ENST00000511391 NUDT7P0C024 238 aa13.57□□□□□ -0.24
ARRDC3-206ENST00000511391 PBX2P40425 430 aa13.57□□□□□ -0.24
ARRDC3-206ENST00000511391 AXIN2Q9Y2T1 843 aa13.55□□□□□ -0.24
ARRDC3-206ENST00000511391 NLRP6P59044 892 aa13.54□□□□□ -0.24
ARRDC3-206ENST00000511391 PLA2G2EQ9NZK7 142 aa13.53□□□□□ -0.24
ARRDC3-206ENST00000511391 LHX6Q9UPM6 363 aa13.53□□□□□ -0.24
ARRDC3-206ENST00000511391 C2orf72A6NCS6 295 aa13.52□□□□□ -0.25
ARRDC3-206ENST00000511391 MFRPQ9BY79 579 aa13.49□□□□□ -0.25
ARRDC3-206ENST00000511391 BCL11BQ9C0K0 894 aaPredicted RBP13.48□□□□□ -0.25
ARRDC3-206ENST00000511391 PCDHGA4Q9Y5G9 962 aa13.48□□□□□ -0.25
ARRDC3-206ENST00000511391 SLC34A2O95436 690 aa13.46□□□□□ -0.25
ARRDC3-206ENST00000511391 HCSTQ9UBK5 93 aa13.46□□□□□ -0.25
ARRDC3-206ENST00000511391 ADGRD1Q6QNK2 874 aa13.43□□□□□ -0.26
ARRDC3-206ENST00000511391 STK24Q9Y6E0 443 aa13.39□□□□□ -0.27
ARRDC3-206ENST00000511391 ARHGAP33O14559 1287 aa13.37□□□□□ -0.27
ARRDC3-206ENST00000511391 KDM4FA0A1W2PPD8 638 aa13.36□□□□□ -0.27
ARRDC3-206ENST00000511391 HRO43593 1189 aa13.35□□□□□ -0.27
ARRDC3-206ENST00000511391 DMRTA1Q5VZB9 504 aa13.32□□□□□ -0.28
ARRDC3-206ENST00000511391 TK2O00142 265 aa13.31□□□□□ -0.28
ARRDC3-206ENST00000511391 TMC2Q8TDI7 906 aa13.3□□□□□ -0.28
ARRDC3-206ENST00000511391 PSEN2P49810 448 aa13.29□□□□□ -0.28
ARRDC3-206ENST00000511391 STK25O00506 426 aa13.28□□□□□ -0.28
ARRDC3-206ENST00000511391 PSDA5PKW4 1024 aaPredicted RBP13.27□□□□□ -0.29
ARRDC3-206ENST00000511391 TAOK2Q9UL54 1235 aa13.27□□□□□ -0.29
ARRDC3-206ENST00000511391 PTCD2Q8WV60 388 aaKnown RBP13.23□□□□□ -0.29
ARRDC3-206ENST00000511391 PPP1R37O75864 691 aa13.22□□□□□ -0.29
ARRDC3-206ENST00000511391 KCTD12Q96CX2 325 aaKnown RBP13.22□□□□□ -0.29
ARRDC3-206ENST00000511391 PPP4R3BQ5MIZ7 849 aa13.14□□□□□ -0.31
ARRDC3-206ENST00000511391 FOXK1P85037 733 aa13.12□□□□□ -0.31
ARRDC3-206ENST00000511391 KCNK17Q96T54 332 aa13.11□□□□□ -0.31
ARRDC3-206ENST00000511391 PLPP6Q8IY26 295 aa13.1□□□□□ -0.31
ARRDC3-206ENST00000511391 VPS9D1Q9Y2B5 631 aa13.09□□□□□ -0.31
ARRDC3-206ENST00000511391 RGL2O15211 777 aa13.08□□□□□ -0.32
ARRDC3-206ENST00000511391 ECM2O94769 699 aaPredicted RBP13.08□□□□□ -0.32
ARRDC3-206ENST00000511391 IFFO2Q5TF58 517 aa13.07□□□□□ -0.32
ARRDC3-206ENST00000511391 PTPN5P54829 565 aa13.06□□□□□ -0.32
ARRDC3-206ENST00000511391 DSG2Q14126 1118 aa13.05□□□□□ -0.32
ARRDC3-206ENST00000511391 GPHNQ9NQX3 736 aaPredicted RBP13.05□□□□□ -0.32
ARRDC3-206ENST00000511391 RGS20O76081 388 aa13.04□□□□□ -0.32
ARRDC3-206ENST00000511391 STAC3Q96MF2 364 aa13.04□□□□□ -0.32
ARRDC3-206ENST00000511391 PKD2Q13563 968 aa13.01□□□□□ -0.33
ARRDC3-206ENST00000511391 A0A0G2JS52 829 aa13□□□□□ -0.33
ARRDC3-206ENST00000511391 IRX2Q9BZI1 471 aaPredicted RBP13□□□□□ -0.33
ARRDC3-206ENST00000511391 BHMG1C9JSJ3 638 aaPredicted RBP12.99□□□□□ -0.33
ARRDC3-206ENST00000511391 THSD4Q6ZMP0 1018 aa12.99□□□□□ -0.33
ARRDC3-206ENST00000511391 TBC1D12O60347 775 aa12.98□□□□□ -0.33
ARRDC3-206ENST00000511391 KCNH8Q96L42 1107 aa12.98□□□□□ -0.33
ARRDC3-206ENST00000511391 SLC4A5Q9BY07 1137 aa12.98□□□□□ -0.33
ARRDC3-206ENST00000511391 OXER1Q8TDS5 423 aa12.96□□□□□ -0.33
ARRDC3-206ENST00000511391 BCL2L12Q9HB09 334 aa12.96□□□□□ -0.33
ARRDC3-206ENST00000511391 ZNF454Q8N9F8 522 aa12.93□□□□□ -0.34
ARRDC3-206ENST00000511391 ZBED2Q9BTP6 218 aa12.91□□□□□ -0.34
ARRDC3-206ENST00000511391 UPF1Q92900 1129 aaKnown RBP eCLIP12.89□□□□□ -0.351e-31■■■□□ 16
ARRDC3-206ENST00000511391 FOSBP53539 338 aa12.88□□□□□ -0.35
ARRDC3-206ENST00000511391 WNT2BQ93097 391 aa12.88□□□□□ -0.35
ARRDC3-206ENST00000511391 PTPREP23469 700 aa12.84□□□□□ -0.35
ARRDC3-206ENST00000511391 MRPL50Q8N5N7 158 aaKnown RBP12.84□□□□□ -0.35
ARRDC3-206ENST00000511391 GOLGA8CPA6NN73 597 aa12.81□□□□□ -0.36
ARRDC3-206ENST00000511391 CRISPLD2Q9H0B8 497 aa12.81□□□□□ -0.36
ARRDC3-206ENST00000511391 HS6ST3Q8IZP7 471 aa12.79□□□□□ -0.36
ARRDC3-206ENST00000511391 JPH4Q96JJ6 628 aa12.79□□□□□ -0.36
ARRDC3-206ENST00000511391 ADAM33Q9BZ11 813 aa12.79□□□□□ -0.36
ARRDC3-206ENST00000511391 ANO8Q9HCE9 1232 aaPredicted RBP12.78□□□□□ -0.36
ARRDC3-206ENST00000511391 ITGBL1O95965 494 aaPredicted RBP12.77□□□□□ -0.37
ARRDC3-206ENST00000511391 PPP1R15BQ5SWA1 713 aa12.76□□□□□ -0.37
ARRDC3-206ENST00000511391 NBPF3Q9H094 633 aa12.76□□□□□ -0.37
ARRDC3-206ENST00000511391 ZDHHC16Q969W1 377 aa12.73□□□□□ -0.37
ARRDC3-206ENST00000511391 NCKAP5LQ9HCH0 1330 aa12.7□□□□□ -0.38
ARRDC3-206ENST00000511391 EVI5O60447 810 aa12.7□□□□□ -0.38
ARRDC3-206ENST00000511391 NKX1-1Q15270 411 aaPredicted RBP12.7□□□□□ -0.38
ARRDC3-206ENST00000511391 Q6ZNB5 142 aa12.69□□□□□ -0.38
ARRDC3-206ENST00000511391 BCAMP50895 628 aa12.67□□□□□ -0.38
ARRDC3-206ENST00000511391 PROX2Q3B8N5 592 aa12.67□□□□□ -0.38
ARRDC3-206ENST00000511391 PPP1R3GB7ZBB8 358 aa12.66□□□□□ -0.38
ARRDC3-206ENST00000511391 ANKK1Q8NFD2 765 aa12.66□□□□□ -0.38
ARRDC3-206ENST00000511391 RABGEF1Q9UJ41 708 aa12.66□□□□□ -0.38
ARRDC3-206ENST00000511391 LCE2BO14633 110 aa12.65□□□□□ -0.38
ARRDC3-206ENST00000511391 COL9A1P20849 921 aa12.64□□□□□ -0.39
ARRDC3-206ENST00000511391 DNAJC5Q9H3Z4 198 aa12.62□□□□□ -0.39
ARRDC3-206ENST00000511391 SOWAHBA6NEL2 793 aa12.61□□□□□ -0.39
ARRDC3-206ENST00000511391 PCDHGA10Q9Y5H3 936 aa12.61□□□□□ -0.39
ARRDC3-206ENST00000511391 CHGAP10645 457 aaKnown RBP12.59□□□□□ -0.39
ARRDC3-206ENST00000511391 WBP1LQ9NX94 342 aa12.58□□□□□ -0.4
ARRDC3-206ENST00000511391 LAPTM4BQ86VI4 370 aa12.57□□□□□ -0.4
ARRDC3-206ENST00000511391 PDE4AP27815 886 aa12.56□□□□□ -0.4
ARRDC3-206ENST00000511391 NYAP1Q6ZVC0 841 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms