RNA–Protein interactions for RNA: ENST00000511365.1

SNX2-210, Transcript of sorting nexin 2, humanhuman

TSL 5

Gene SNX2, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-210ENST00000511365 PHF8Q9UPP1 1060 aa11.32□□□□□ -0.6
SNX2-210ENST00000511365 SNPHO15079 494 aa11.31□□□□□ -0.6
SNX2-210ENST00000511365 MFRPQ9BY79 579 aa11.3□□□□□ -0.6
SNX2-210ENST00000511365 G3V3G9 751 aa11.26□□□□□ -0.61
SNX2-210ENST00000511365 ILDR1Q86SU0 546 aaPredicted RBP11.26□□□□□ -0.61
SNX2-210ENST00000511365 PDCD7Q8N8D1 485 aaKnown RBP11.26□□□□□ -0.61
SNX2-210ENST00000511365 FBXO22Q8NEZ5 403 aa11.26□□□□□ -0.61
SNX2-210ENST00000511365 L3MBTL3Q96JM7 780 aaPredicted RBP11.23□□□□□ -0.61
SNX2-210ENST00000511365 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.23□□□□□ -0.61
SNX2-210ENST00000511365 BCANQ96GW7 911 aa11.21□□□□□ -0.61
SNX2-210ENST00000511365 MS4A4AQ96JQ5 239 aa11.21□□□□□ -0.61
SNX2-210ENST00000511365 MARVELD3Q96A59 401 aa11.19□□□□□ -0.62
SNX2-210ENST00000511365 PPP1R37O75864 691 aa11.18□□□□□ -0.62
SNX2-210ENST00000511365 BOLA1Q9Y3E2 137 aa11.17□□□□□ -0.62
SNX2-210ENST00000511365 DPY19L2Q6NUT2 758 aa11.16□□□□□ -0.62
SNX2-210ENST00000511365 CADPS2Q86UW7 1296 aa11.16□□□□□ -0.62
SNX2-210ENST00000511365 C3orf67Q6ZVT6 689 aa11.14□□□□□ -0.63
SNX2-210ENST00000511365 EMP3P54852 163 aa11.12□□□□□ -0.63
SNX2-210ENST00000511365 MICALL2Q8IY33 904 aa11.12□□□□□ -0.63
SNX2-210ENST00000511365 HS3ST6Q96QI5 342 aa11.04□□□□□ -0.64
SNX2-210ENST00000511365 KRTAP3-3Q9BYR6 98 aa11.04□□□□□ -0.64
SNX2-210ENST00000511365 KRTAP3-2Q9BYR7 98 aa11.04□□□□□ -0.64
SNX2-210ENST00000511365 FAM205CA6NFA0 338 aa11.01□□□□□ -0.65
SNX2-210ENST00000511365 NBR1Q14596 966 aa11.01□□□□□ -0.65
SNX2-210ENST00000511365 WDR70Q9NW82 654 aa11□□□□□ -0.65
SNX2-210ENST00000511365 TMC2Q8TDI7 906 aa10.99□□□□□ -0.65
SNX2-210ENST00000511365 PRKCSHP14314 528 aaPredicted RBP10.97□□□□□ -0.65
SNX2-210ENST00000511365 NCKAP5LQ9HCH0 1330 aa10.96□□□□□ -0.65
SNX2-210ENST00000511365 POTEB3A0JP26 581 aa10.96□□□□□ -0.65
SNX2-210ENST00000511365 POTEBQ6S5H4 581 aa10.96□□□□□ -0.65
SNX2-210ENST00000511365 PDE4AP27815 886 aa10.95□□□□□ -0.66
SNX2-210ENST00000511365 KCNV2Q8TDN2 545 aa10.95□□□□□ -0.66
SNX2-210ENST00000511365 P3H3Q8IVL6 736 aa10.92□□□□□ -0.66
SNX2-210ENST00000511365 LARP6Q9BRS8 491 aaKnown RBP10.91□□□□□ -0.66
SNX2-210ENST00000511365 GPHNQ9NQX3 736 aaPredicted RBP10.91□□□□□ -0.66
SNX2-210ENST00000511365 C2orf72A6NCS6 295 aa10.9□□□□□ -0.66
SNX2-210ENST00000511365 CRISPLD2Q9H0B8 497 aa10.9□□□□□ -0.66
SNX2-210ENST00000511365 TPRNQ4KMQ1 711 aa10.89□□□□□ -0.67
SNX2-210ENST00000511365 TMEM92Q6UXU6 159 aa10.89□□□□□ -0.67
SNX2-210ENST00000511365 DDX27Q96GQ7 796 aaKnown RBP10.88□□□□□ -0.67
SNX2-210ENST00000511365 KIF3CO14782 793 aa10.87□□□□□ -0.67
SNX2-210ENST00000511365 E2F4Q16254 413 aa10.86□□□□□ -0.67
SNX2-210ENST00000511365 FOXK1P85037 733 aa10.85□□□□□ -0.67
SNX2-210ENST00000511365 MFSD10Q14728 455 aa10.85□□□□□ -0.67
SNX2-210ENST00000511365 PPP1R15BQ5SWA1 713 aa10.85□□□□□ -0.67
SNX2-210ENST00000511365 RNF166Q96A37 237 aaPredicted RBP10.83□□□□□ -0.68
SNX2-210ENST00000511365 DSG2Q14126 1118 aa10.82□□□□□ -0.68
SNX2-210ENST00000511365 DOK7Q18PE1 504 aa10.81□□□□□ -0.68
SNX2-210ENST00000511365 PLPP6Q8IY26 295 aa10.81□□□□□ -0.68
SNX2-210ENST00000511365 ZNF710Q8N1W2 664 aa10.81□□□□□ -0.68
SNX2-210ENST00000511365 RIMBP2O15034 1052 aa10.8□□□□□ -0.68
SNX2-210ENST00000511365 HOXB3P14651 431 aaPredicted RBP10.8□□□□□ -0.68
SNX2-210ENST00000511365 HOXB1P14653 301 aaPredicted RBP10.8□□□□□ -0.68
SNX2-210ENST00000511365 ARHGEF1Q92888 912 aaKnown RBP10.8□□□□□ -0.68
SNX2-210ENST00000511365 ERBB3P21860 1342 aa10.79□□□□□ -0.68
SNX2-210ENST00000511365 CAMK2BQ13554 666 aa10.74□□□□□ -0.69
SNX2-210ENST00000511365 MYT1LQ9UL68 1186 aa10.74□□□□□ -0.69
SNX2-210ENST00000511365 SLC34A2O95436 690 aa10.73□□□□□ -0.69
SNX2-210ENST00000511365 SEMA3EO15041 775 aa10.72□□□□□ -0.69
SNX2-210ENST00000511365 TBC1D12O60347 775 aa10.72□□□□□ -0.69
SNX2-210ENST00000511365 ZSWIM6Q9HCJ5 1215 aa10.72□□□□□ -0.69
SNX2-210ENST00000511365 VARS2Q5ST30 1063 aaKnown RBP10.69□□□□□ -0.7
SNX2-210ENST00000511365 ZNF316A6NFI3 1004 aaPredicted RBP10.68□□□□□ -0.7
SNX2-210ENST00000511365 PTGER2P43116 358 aa10.68□□□□□ -0.7
SNX2-210ENST00000511365 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.68□□□□□ -0.7
SNX2-210ENST00000511365 PTCD2Q8WV60 388 aaKnown RBP10.68□□□□□ -0.7
SNX2-210ENST00000511365 UPF1Q92900 1129 aaKnown RBP eCLIP10.68□□□□□ -0.7
SNX2-210ENST00000511365 EMILIN3Q9NT22 766 aa10.68□□□□□ -0.7
SNX2-210ENST00000511365 ARIH1Q9Y4X5 557 aaPredicted RBP10.68□□□□□ -0.7
SNX2-210ENST00000511365 LMOD2Q6P5Q4 547 aa10.67□□□□□ -0.7
SNX2-210ENST00000511365 TESPA1A2RU30 521 aaPredicted RBP10.66□□□□□ -0.7
SNX2-210ENST00000511365 PCDHGA4Q9Y5G9 962 aa10.66□□□□□ -0.7
SNX2-210ENST00000511365 DPYSL4O14531 572 aa10.65□□□□□ -0.7
SNX2-210ENST00000511365 MAP3K9P80192 1104 aa10.65□□□□□ -0.7
SNX2-210ENST00000511365 OXER1Q8TDS5 423 aa10.65□□□□□ -0.7
SNX2-210ENST00000511365 ZNF687Q8N1G0 1237 aa10.64□□□□□ -0.71
SNX2-210ENST00000511365 TULP1O00294 542 aaPredicted RBP10.61□□□□□ -0.71
SNX2-210ENST00000511365 ARSIQ5FYB1 569 aa10.61□□□□□ -0.71
SNX2-210ENST00000511365 GPR153Q6NV75 609 aa10.6□□□□□ -0.71
SNX2-210ENST00000511365 MLLT3P42568 568 aaPredicted RBP10.59□□□□□ -0.71
SNX2-210ENST00000511365 SPDYE16A6NNV3 312 aaPredicted RBP10.57□□□□□ -0.72
SNX2-210ENST00000511365 NUDT7P0C024 238 aa10.57□□□□□ -0.72
SNX2-210ENST00000511365 EVI5O60447 810 aa10.56□□□□□ -0.72
SNX2-210ENST00000511365 PDIA6Q15084 440 aa10.55□□□□□ -0.72
SNX2-210ENST00000511365 KHSRPQ92945 711 aaKnown RBP eCLIP10.55□□□□□ -0.722e-6■■■■□ 22.5
SNX2-210ENST00000511365 SMYD5Q6GMV2 418 aa10.54□□□□□ -0.72
SNX2-210ENST00000511365 PSDA5PKW4 1024 aaPredicted RBP10.53□□□□□ -0.72
SNX2-210ENST00000511365 RBM26Q5T8P6 1007 aaKnown RBP10.51□□□□□ -0.73
SNX2-210ENST00000511365 ZC3H15Q8WU90 426 aaKnown RBP10.51□□□□□ -0.73
SNX2-210ENST00000511365 ANKRD13DQ6ZTN6 518 aa10.49□□□□□ -0.73
SNX2-210ENST00000511365 ANO8Q9HCE9 1232 aaPredicted RBP10.49□□□□□ -0.73
SNX2-210ENST00000511365 KDM4FA0A1W2PPD8 638 aa10.48□□□□□ -0.73
SNX2-210ENST00000511365 LHX6Q9UPM6 363 aa10.48□□□□□ -0.73
SNX2-210ENST00000511365 PPP4R3BQ5MIZ7 849 aa10.46□□□□□ -0.73
SNX2-210ENST00000511365 JPH4Q96JJ6 628 aa10.46□□□□□ -0.73
SNX2-210ENST00000511365 GRXCR2A6NFK2 248 aa10.45□□□□□ -0.74
SNX2-210ENST00000511365 LSM11P83369 360 aaKnown RBP eCLIP10.44□□□□□ -0.74
SNX2-210ENST00000511365 ZNF454Q8N9F8 522 aa10.44□□□□□ -0.74
SNX2-210ENST00000511365 PHF14O94880 888 aa10.43□□□□□ -0.74
SNX2-210ENST00000511365 FOSBP53539 338 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms