RNA–Protein interactions for RNA: ENST00000511346.1

AC012055.1-201, humanhuman

TSL 3 BASIC

Gene AC012055.1, Length 1,144 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012055.1-201ENST00000511346 KRTAP3-3Q9BYR6 98 aa12.32□□□□□ -0.44
AC012055.1-201ENST00000511346 KRTAP3-2Q9BYR7 98 aa12.32□□□□□ -0.44
AC012055.1-201ENST00000511346 ECM2O94769 699 aaPredicted RBP12.31□□□□□ -0.44
AC012055.1-201ENST00000511346 STK24Q9Y6E0 443 aa12.31□□□□□ -0.44
AC012055.1-201ENST00000511346 FBXO22Q8NEZ5 403 aa12.3□□□□□ -0.44
AC012055.1-201ENST00000511346 STK25O00506 426 aa12.27□□□□□ -0.45
AC012055.1-201ENST00000511346 ZSWIM6Q9HCJ5 1215 aa12.27□□□□□ -0.45
AC012055.1-201ENST00000511346 ERBB3P21860 1342 aa12.27□□□□□ -0.45
AC012055.1-201ENST00000511346 MFRPQ9BY79 579 aa12.26□□□□□ -0.45
AC012055.1-201ENST00000511346 PKD2Q13563 968 aa12.24□□□□□ -0.45
AC012055.1-201ENST00000511346 RGL2O15211 777 aa12.21□□□□□ -0.45
AC012055.1-201ENST00000511346 GPR153Q6NV75 609 aa12.21□□□□□ -0.45
AC012055.1-201ENST00000511346 VARS2Q5ST30 1063 aaKnown RBP12.18□□□□□ -0.46
AC012055.1-201ENST00000511346 KIF3CO14782 793 aa12.13□□□□□ -0.47
AC012055.1-201ENST00000511346 ARSIQ5FYB1 569 aa12.13□□□□□ -0.47
AC012055.1-201ENST00000511346 ZNF687Q8N1G0 1237 aa12.13□□□□□ -0.47
AC012055.1-201ENST00000511346 C2orf72A6NCS6 295 aa12.11□□□□□ -0.47
AC012055.1-201ENST00000511346 KHSRPQ92945 711 aaKnown RBP eCLIP12.07□□□□□ -0.48
AC012055.1-201ENST00000511346 ZNF316A6NFI3 1004 aaPredicted RBP12.05□□□□□ -0.48
AC012055.1-201ENST00000511346 PPP1R37O75864 691 aa12.02□□□□□ -0.49
AC012055.1-201ENST00000511346 TMC2Q8TDI7 906 aa12.02□□□□□ -0.49
AC012055.1-201ENST00000511346 SLC34A2O95436 690 aa12.01□□□□□ -0.49
AC012055.1-201ENST00000511346 RNF166Q96A37 237 aaPredicted RBP11.99□□□□□ -0.49
AC012055.1-201ENST00000511346 NUDT7P0C024 238 aa11.98□□□□□ -0.49
AC012055.1-201ENST00000511346 HS6ST3Q8IZP7 471 aa11.98□□□□□ -0.49
AC012055.1-201ENST00000511346 MYT1LQ9UL68 1186 aa11.97□□□□□ -0.49
AC012055.1-201ENST00000511346 PCDHGA4Q9Y5G9 962 aa11.97□□□□□ -0.49
AC012055.1-201ENST00000511346 PTGER2P43116 358 aa11.94□□□□□ -0.5
AC012055.1-201ENST00000511346 ANKRD13DQ6ZTN6 518 aa11.92□□□□□ -0.5
AC012055.1-201ENST00000511346 LHX6Q9UPM6 363 aa11.92□□□□□ -0.5
AC012055.1-201ENST00000511346 LSM11P83369 360 aaKnown RBP eCLIP11.91□□□□□ -0.5
AC012055.1-201ENST00000511346 PBX2P40425 430 aa11.9□□□□□ -0.5
AC012055.1-201ENST00000511346 CHGAP10645 457 aaKnown RBP11.88□□□□□ -0.51
AC012055.1-201ENST00000511346 FOXK1P85037 733 aa11.87□□□□□ -0.51
AC012055.1-201ENST00000511346 POTEEQ6S8J3 1075 aa11.86□□□□□ -0.51
AC012055.1-201ENST00000511346 PTCD2Q8WV60 388 aaKnown RBP11.86□□□□□ -0.51
AC012055.1-201ENST00000511346 GPHNQ9NQX3 736 aaPredicted RBP11.86□□□□□ -0.51
AC012055.1-201ENST00000511346 DNAJC5Q9H3Z4 198 aa11.85□□□□□ -0.51
AC012055.1-201ENST00000511346 KDM4FA0A1W2PPD8 638 aa11.84□□□□□ -0.51
AC012055.1-201ENST00000511346 PLPP6Q8IY26 295 aa11.84□□□□□ -0.51
AC012055.1-201ENST00000511346 PSDA5PKW4 1024 aaPredicted RBP11.83□□□□□ -0.52
AC012055.1-201ENST00000511346 AXIN2Q9Y2T1 843 aa11.82□□□□□ -0.52
AC012055.1-201ENST00000511346 DSG2Q14126 1118 aa11.81□□□□□ -0.52
AC012055.1-201ENST00000511346 NKX1-1Q15270 411 aaPredicted RBP11.8□□□□□ -0.52
AC012055.1-201ENST00000511346 RYDENQ9NUL5 291 aaKnown RBP11.79□□□□□ -0.52
AC012055.1-201ENST00000511346 AMER1Q5JTC6 1135 aaPredicted RBP11.78□□□□□ -0.52
AC012055.1-201ENST00000511346 ARHGAP33O14559 1287 aa11.77□□□□□ -0.53
AC012055.1-201ENST00000511346 TBC1D12O60347 775 aa11.77□□□□□ -0.53
AC012055.1-201ENST00000511346 RTN4Q9NQC3 1192 aaKnown RBP11.73□□□□□ -0.53
AC012055.1-201ENST00000511346 ADGRD1Q6QNK2 874 aa11.72□□□□□ -0.53
AC012055.1-201ENST00000511346 CRISPLD2Q9H0B8 497 aa11.71□□□□□ -0.53
AC012055.1-201ENST00000511346 PPP4R3BQ5MIZ7 849 aa11.7□□□□□ -0.54
AC012055.1-201ENST00000511346 TK2O00142 265 aa11.69□□□□□ -0.54
AC012055.1-201ENST00000511346 OXER1Q8TDS5 423 aa11.69□□□□□ -0.54
AC012055.1-201ENST00000511346 PSEN2P49810 448 aa11.68□□□□□ -0.54
AC012055.1-201ENST00000511346 DMRTA1Q5VZB9 504 aa11.67□□□□□ -0.54
AC012055.1-201ENST00000511346 PPP1R15BQ5SWA1 713 aa11.66□□□□□ -0.54
AC012055.1-201ENST00000511346 UPF1Q92900 1129 aaKnown RBP eCLIP11.65□□□□□ -0.54
AC012055.1-201ENST00000511346 HRO43593 1189 aa11.64□□□□□ -0.55
AC012055.1-201ENST00000511346 PDE4AP27815 886 aa11.64□□□□□ -0.55
AC012055.1-201ENST00000511346 NCKAP5LQ9HCH0 1330 aa11.63□□□□□ -0.55
AC012055.1-201ENST00000511346 GTPBP6O43824 516 aaPredicted RBP11.63□□□□□ -0.55
AC012055.1-201ENST00000511346 HCSTQ9UBK5 93 aa11.63□□□□□ -0.55
AC012055.1-201ENST00000511346 KCNH8Q96L42 1107 aa11.6□□□□□ -0.55
AC012055.1-201ENST00000511346 KCNK17Q96T54 332 aa11.6□□□□□ -0.55
AC012055.1-201ENST00000511346 DCAF8L2P0C7V8 631 aa11.58□□□□□ -0.56
AC012055.1-201ENST00000511346 ZNF454Q8N9F8 522 aa11.58□□□□□ -0.56
AC012055.1-201ENST00000511346 BCL2L12Q9HB09 334 aa11.56□□□□□ -0.56
AC012055.1-201ENST00000511346 FOSBP53539 338 aa11.55□□□□□ -0.56
AC012055.1-201ENST00000511346 STAC3Q96MF2 364 aa11.55□□□□□ -0.56
AC012055.1-201ENST00000511346 ANO8Q9HCE9 1232 aaPredicted RBP11.55□□□□□ -0.56
AC012055.1-201ENST00000511346 LARP6Q9BRS8 491 aaKnown RBP11.54□□□□□ -0.56
AC012055.1-201ENST00000511346 PLA2G2EQ9NZK7 142 aa11.54□□□□□ -0.56
AC012055.1-201ENST00000511346 VPS9D1Q9Y2B5 631 aa11.54□□□□□ -0.56
AC012055.1-201ENST00000511346 DDX27Q96GQ7 796 aaKnown RBP11.53□□□□□ -0.56
AC012055.1-201ENST00000511346 EVI5O60447 810 aa11.52□□□□□ -0.57
AC012055.1-201ENST00000511346 MFSD10Q14728 455 aa11.52□□□□□ -0.57
AC012055.1-201ENST00000511346 KCTD12Q96CX2 325 aaKnown RBP11.52□□□□□ -0.57
AC012055.1-201ENST00000511346 SLC4A5Q9BY07 1137 aa11.52□□□□□ -0.57
AC012055.1-201ENST00000511346 PTPREP23469 700 aa11.5□□□□□ -0.57
AC012055.1-201ENST00000511346 JPH4Q96JJ6 628 aa11.49□□□□□ -0.57
AC012055.1-201ENST00000511346 MAP3K9P80192 1104 aa11.47□□□□□ -0.57
AC012055.1-201ENST00000511346 ZDHHC16Q969W1 377 aa11.46□□□□□ -0.57
AC012055.1-201ENST00000511346 BHMG1C9JSJ3 638 aaPredicted RBP11.45□□□□□ -0.58
AC012055.1-201ENST00000511346 ZBED2Q9BTP6 218 aa11.45□□□□□ -0.58
AC012055.1-201ENST00000511346 ADAM33Q9BZ11 813 aa11.44□□□□□ -0.58
AC012055.1-201ENST00000511346 EMILIN3Q9NT22 766 aa11.44□□□□□ -0.58
AC012055.1-201ENST00000511346 CADPS2Q86UW7 1296 aa11.42□□□□□ -0.58
AC012055.1-201ENST00000511346 BBXQ8WY36 941 aaPredicted RBP11.41□□□□□ -0.58
AC012055.1-201ENST00000511346 PTPN5P54829 565 aa11.38□□□□□ -0.59
AC012055.1-201ENST00000511346 MRPL50Q8N5N7 158 aaKnown RBP11.38□□□□□ -0.59
AC012055.1-201ENST00000511346 PCDHGA10Q9Y5H3 936 aa11.38□□□□□ -0.59
AC012055.1-201ENST00000511346 GOLGA8CPA6NN73 597 aa11.37□□□□□ -0.59
AC012055.1-201ENST00000511346 THSD4Q6ZMP0 1018 aa11.37□□□□□ -0.59
AC012055.1-201ENST00000511346 WNT2BQ93097 391 aa11.35□□□□□ -0.59
AC012055.1-201ENST00000511346 NBPF3Q9H094 633 aa11.35□□□□□ -0.59
AC012055.1-201ENST00000511346 PPP1R3GB7ZBB8 358 aa11.34□□□□□ -0.59
AC012055.1-201ENST00000511346 PHF14O94880 888 aa11.33□□□□□ -0.6
AC012055.1-201ENST00000511346 CAMK2BQ13554 666 aa11.33□□□□□ -0.6
AC012055.1-201ENST00000511346 TYW1BQ6NUM6 668 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms