RNA–Protein interactions for RNA: ENST00000511333.5

MATR3-217, Transcript of matrin 3, humanhuman

TSL 5

Gene MATR3, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-217ENST00000511333 MS4A4AQ96JQ5 239 aa12.51□□□□□ -0.41
MATR3-217ENST00000511333 HCSTQ9UBK5 93 aa12.51□□□□□ -0.41
MATR3-217ENST00000511333 SOX12O15370 315 aa12.48□□□□□ -0.41
MATR3-217ENST00000511333 POTEEQ6S8J3 1075 aa12.47□□□□□ -0.41
MATR3-217ENST00000511333 SPOCK2Q92563 424 aa12.47□□□□□ -0.41
MATR3-217ENST00000511333 KHSRPQ92945 711 aaKnown RBP eCLIP12.47□□□□□ -0.412e-11■■■■□ 24
MATR3-217ENST00000511333 CIZ1Q9ULV3 898 aaPredicted RBP12.45□□□□□ -0.42
MATR3-217ENST00000511333 TRIM41Q8WV44 630 aa12.42□□□□□ -0.42
MATR3-217ENST00000511333 IFNLR1Q8IU57 520 aaPredicted RBP12.39□□□□□ -0.43
MATR3-217ENST00000511333 PHF8Q9UPP1 1060 aa12.36□□□□□ -0.43
MATR3-217ENST00000511333 KIF3CO14782 793 aa12.35□□□□□ -0.43
MATR3-217ENST00000511333 ADGRD1Q6QNK2 874 aa12.35□□□□□ -0.43
MATR3-217ENST00000511333 NUDT7P0C024 238 aa12.33□□□□□ -0.44
MATR3-217ENST00000511333 LHX6Q9UPM6 363 aa12.33□□□□□ -0.44
MATR3-217ENST00000511333 AXIN2Q9Y2T1 843 aa12.33□□□□□ -0.44
MATR3-217ENST00000511333 SLC34A2O95436 690 aa12.32□□□□□ -0.44
MATR3-217ENST00000511333 RGS20O76081 388 aa12.3□□□□□ -0.44
MATR3-217ENST00000511333 TK2O00142 265 aa12.29□□□□□ -0.44
MATR3-217ENST00000511333 HRO43593 1189 aa12.28□□□□□ -0.44
MATR3-217ENST00000511333 ARHGAP33O14559 1287 aa12.27□□□□□ -0.45
MATR3-217ENST00000511333 FBXO22Q8NEZ5 403 aa12.26□□□□□ -0.45
MATR3-217ENST00000511333 PCDHGA4Q9Y5G9 962 aa12.26□□□□□ -0.45
MATR3-217ENST00000511333 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.25□□□□□ -0.45
MATR3-217ENST00000511333 ZFP91Q96JP5 570 aaPredicted RBP12.25□□□□□ -0.45
MATR3-217ENST00000511333 RIOK3O14730 519 aaKnown RBP12.24□□□□□ -0.45
MATR3-217ENST00000511333 IFFO2Q5TF58 517 aa12.24□□□□□ -0.45
MATR3-217ENST00000511333 RNF25Q96BH1 459 aaPredicted RBP12.24□□□□□ -0.45
MATR3-217ENST00000511333 PSDA5PKW4 1024 aaPredicted RBP12.23□□□□□ -0.45
MATR3-217ENST00000511333 C2orf72A6NCS6 295 aa12.22□□□□□ -0.45
MATR3-217ENST00000511333 NLRP6P59044 892 aa12.22□□□□□ -0.45
MATR3-217ENST00000511333 VGFO15240 615 aaPredicted RBP12.21□□□□□ -0.45
MATR3-217ENST00000511333 KDM4FA0A1W2PPD8 638 aa12.18□□□□□ -0.46
MATR3-217ENST00000511333 IRX2Q9BZI1 471 aaPredicted RBP12.15□□□□□ -0.46
MATR3-217ENST00000511333 DMRTA1Q5VZB9 504 aa12.14□□□□□ -0.47
MATR3-217ENST00000511333 KCTD12Q96CX2 325 aaKnown RBP12.13□□□□□ -0.47
MATR3-217ENST00000511333 MFRPQ9BY79 579 aa12.09□□□□□ -0.47
MATR3-217ENST00000511333 A0A0G2JS52 829 aa12.08□□□□□ -0.48
MATR3-217ENST00000511333 PSEN2P49810 448 aa12.08□□□□□ -0.48
MATR3-217ENST00000511333 PTCD2Q8WV60 388 aaKnown RBP12.03□□□□□ -0.48
MATR3-217ENST00000511333 TMC2Q8TDI7 906 aa12.01□□□□□ -0.49
MATR3-217ENST00000511333 BCL11BQ9C0K0 894 aaPredicted RBP12.01□□□□□ -0.49
MATR3-217ENST00000511333 PPP4R3BQ5MIZ7 849 aa12□□□□□ -0.49
MATR3-217ENST00000511333 STAC3Q96MF2 364 aa11.96□□□□□ -0.49
MATR3-217ENST00000511333 VPS9D1Q9Y2B5 631 aa11.96□□□□□ -0.49
MATR3-217ENST00000511333 SLC4A5Q9BY07 1137 aa11.95□□□□□ -0.5
MATR3-217ENST00000511333 PTPN5P54829 565 aa11.94□□□□□ -0.5
MATR3-217ENST00000511333 THSD4Q6ZMP0 1018 aa11.94□□□□□ -0.5
MATR3-217ENST00000511333 TAOK2Q9UL54 1235 aa11.94□□□□□ -0.5
MATR3-217ENST00000511333 STK24Q9Y6E0 443 aa11.91□□□□□ -0.5
MATR3-217ENST00000511333 BHMG1C9JSJ3 638 aaPredicted RBP11.9□□□□□ -0.5
MATR3-217ENST00000511333 KCNK17Q96T54 332 aa11.9□□□□□ -0.5
MATR3-217ENST00000511333 KCNH8Q96L42 1107 aa11.89□□□□□ -0.51
MATR3-217ENST00000511333 FOXK1P85037 733 aa11.86□□□□□ -0.51
MATR3-217ENST00000511333 ITGBL1O95965 494 aaPredicted RBP11.82□□□□□ -0.52
MATR3-217ENST00000511333 BCL2L12Q9HB09 334 aa11.82□□□□□ -0.52
MATR3-217ENST00000511333 STK25O00506 426 aa11.8□□□□□ -0.52
MATR3-217ENST00000511333 Q6ZNB5 142 aa11.8□□□□□ -0.52
MATR3-217ENST00000511333 TBC1D12O60347 775 aa11.79□□□□□ -0.52
MATR3-217ENST00000511333 PLPP6Q8IY26 295 aa11.79□□□□□ -0.52
MATR3-217ENST00000511333 WNT2BQ93097 391 aa11.78□□□□□ -0.52
MATR3-217ENST00000511333 PPP1R37O75864 691 aa11.77□□□□□ -0.53
MATR3-217ENST00000511333 ZBED2Q9BTP6 218 aa11.77□□□□□ -0.53
MATR3-217ENST00000511333 GPHNQ9NQX3 736 aaPredicted RBP11.75□□□□□ -0.53
MATR3-217ENST00000511333 LCE2BO14633 110 aa11.73□□□□□ -0.53
MATR3-217ENST00000511333 MRPL50Q8N5N7 158 aaKnown RBP11.73□□□□□ -0.53
MATR3-217ENST00000511333 GOLGA8CPA6NN73 597 aa11.71□□□□□ -0.53
MATR3-217ENST00000511333 DSG2Q14126 1118 aa11.71□□□□□ -0.53
MATR3-217ENST00000511333 OXER1Q8TDS5 423 aa11.71□□□□□ -0.53
MATR3-217ENST00000511333 LAPTM4AQ15012 233 aa11.7□□□□□ -0.54
MATR3-217ENST00000511333 PTPREP23469 700 aa11.69□□□□□ -0.54
MATR3-217ENST00000511333 FOSBP53539 338 aa11.69□□□□□ -0.54
MATR3-217ENST00000511333 ZNF454Q8N9F8 522 aa11.69□□□□□ -0.54
MATR3-217ENST00000511333 NBPF3Q9H094 633 aa11.68□□□□□ -0.54
MATR3-217ENST00000511333 NYAP1Q6ZVC0 841 aa11.61□□□□□ -0.55
MATR3-217ENST00000511333 JPH4Q96JJ6 628 aa11.61□□□□□ -0.55
MATR3-217ENST00000511333 TRAF7Q6Q0C0 670 aa11.59□□□□□ -0.55
MATR3-217ENST00000511333 ANO8Q9HCE9 1232 aaPredicted RBP11.58□□□□□ -0.56
MATR3-217ENST00000511333 ANKK1Q8NFD2 765 aa11.57□□□□□ -0.56
MATR3-217ENST00000511333 ADAM33Q9BZ11 813 aa11.55□□□□□ -0.56
MATR3-217ENST00000511333 RABGEF1Q9UJ41 708 aa11.55□□□□□ -0.56
MATR3-217ENST00000511333 SOWAHBA6NEL2 793 aa11.53□□□□□ -0.56
MATR3-217ENST00000511333 KCNC4Q03721 635 aa11.53□□□□□ -0.56
MATR3-217ENST00000511333 UPF1Q92900 1129 aaKnown RBP eCLIP11.53□□□□□ -0.56
MATR3-217ENST00000511333 ZDHHC16Q969W1 377 aa11.53□□□□□ -0.56
MATR3-217ENST00000511333 PPP1R3GB7ZBB8 358 aa11.52□□□□□ -0.57
MATR3-217ENST00000511333 LAPTM4BQ86VI4 370 aa11.52□□□□□ -0.57
MATR3-217ENST00000511333 BCAMP50895 628 aa11.51□□□□□ -0.57
MATR3-217ENST00000511333 ECM2O94769 699 aaPredicted RBP11.5□□□□□ -0.57
MATR3-217ENST00000511333 GFRA3O60609 400 aa11.49□□□□□ -0.57
MATR3-217ENST00000511333 RGL2O15211 777 aa11.48□□□□□ -0.57
MATR3-217ENST00000511333 CRISPLD2Q9H0B8 497 aa11.48□□□□□ -0.57
MATR3-217ENST00000511333 NRG2O14511 850 aaPredicted RBP11.47□□□□□ -0.57
MATR3-217ENST00000511333 WBP1LQ9NX94 342 aa11.45□□□□□ -0.58
MATR3-217ENST00000511333 PROX2Q3B8N5 592 aa11.44□□□□□ -0.58
MATR3-217ENST00000511333 PPP1R15BQ5SWA1 713 aa11.43□□□□□ -0.58
MATR3-217ENST00000511333 EVI5O60447 810 aa11.42□□□□□ -0.58
MATR3-217ENST00000511333 ZFRQ96KR1 1074 aaKnown RBP11.42□□□□□ -0.58
MATR3-217ENST00000511333 ONECUT3O60422 494 aaPredicted RBP11.4□□□□□ -0.58
MATR3-217ENST00000511333 COL9A1P20849 921 aa11.39□□□□□ -0.59
MATR3-217ENST00000511333 PKD2Q13563 968 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms