RNA–Protein interactions for RNA: ENST00000511270.1

PROM1-212, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-212ENST00000511270 TMEM121BQ9BXQ6 578 aaPredicted RBP9.82□□□□□ -0.84
PROM1-212ENST00000511270 COLQQ9Y215 455 aaPredicted RBP9.82□□□□□ -0.84
PROM1-212ENST00000511270 CECR2Q9BXF3 1484 aa9.81□□□□□ -0.84
PROM1-212ENST00000511270 POTEFA5A3E0 1075 aa9.81□□□□□ -0.84
PROM1-212ENST00000511270 DPY19L2Q6NUT2 758 aa9.81□□□□□ -0.84
PROM1-212ENST00000511270 L3MBTL3Q96JM7 780 aaPredicted RBP9.8□□□□□ -0.84
PROM1-212ENST00000511270 RSF1Q96T23 1441 aaPredicted RBP9.8□□□□□ -0.84
PROM1-212ENST00000511270 CADPS2Q86UW7 1296 aa9.79□□□□□ -0.84
PROM1-212ENST00000511270 MICALL2Q8IY33 904 aa9.79□□□□□ -0.84
PROM1-212ENST00000511270 BOLA1Q9Y3E2 137 aa9.79□□□□□ -0.84
PROM1-212ENST00000511270 MROH2BQ7Z745 1585 aa9.76□□□□□ -0.85
PROM1-212ENST00000511270 G3V3G9 751 aa9.76□□□□□ -0.85
PROM1-212ENST00000511270 CRISPLD2Q9H0B8 497 aa9.76□□□□□ -0.85
PROM1-212ENST00000511270 NCKAP5LQ9HCH0 1330 aa9.74□□□□□ -0.85
PROM1-212ENST00000511270 PDE4AP27815 886 aa9.73□□□□□ -0.85
PROM1-212ENST00000511270 WIZO95785 1651 aa9.72□□□□□ -0.85
PROM1-212ENST00000511270 MFSD10Q14728 455 aa9.72□□□□□ -0.85
PROM1-212ENST00000511270 BAZ1AQ9NRL2 1556 aaPredicted RBP9.71□□□□□ -0.86
PROM1-212ENST00000511270 GPHNQ9NQX3 736 aaPredicted RBP9.7□□□□□ -0.86
PROM1-212ENST00000511270 SMARCA4P51532 1647 aa9.7□□□□□ -0.86
PROM1-212ENST00000511270 WDR70Q9NW82 654 aa9.69□□□□□ -0.86
PROM1-212ENST00000511270 KIF3CO14782 793 aa9.68□□□□□ -0.86
PROM1-212ENST00000511270 P3H3Q8IVL6 736 aa9.68□□□□□ -0.86
PROM1-212ENST00000511270 DDX27Q96GQ7 796 aaKnown RBP9.67□□□□□ -0.86
PROM1-212ENST00000511270 C3orf67Q6ZVT6 689 aa9.66□□□□□ -0.86
PROM1-212ENST00000511270 TMC2Q8TDI7 906 aa9.66□□□□□ -0.86
PROM1-212ENST00000511270 LARP6Q9BRS8 491 aaKnown RBP9.66□□□□□ -0.86
PROM1-212ENST00000511270 FOXK1P85037 733 aa9.65□□□□□ -0.86
PROM1-212ENST00000511270 CAMK2BQ13554 666 aa9.62□□□□□ -0.87
PROM1-212ENST00000511270 PPP1R15BQ5SWA1 713 aa9.62□□□□□ -0.87
PROM1-212ENST00000511270 TMEM92Q6UXU6 159 aa9.62□□□□□ -0.87
PROM1-212ENST00000511270 C2orf72A6NCS6 295 aa9.61□□□□□ -0.87
PROM1-212ENST00000511270 E2F4Q16254 413 aa9.61□□□□□ -0.87
PROM1-212ENST00000511270 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.61□□□□□ -0.87
PROM1-212ENST00000511270 POTEB2H3BUK9 544 aa9.6□□□□□ -0.87
PROM1-212ENST00000511270 MAMSTRQ6ZN01 415 aa9.6□□□□□ -0.87
PROM1-212ENST00000511270 KCNV2Q8TDN2 545 aa9.6□□□□□ -0.87
PROM1-212ENST00000511270 ARIH1Q9Y4X5 557 aaPredicted RBP9.6□□□□□ -0.87
PROM1-212ENST00000511270 POTEJP0CG39 1038 aa9.59□□□□□ -0.87
PROM1-212ENST00000511270 DSG2Q14126 1118 aa9.59□□□□□ -0.87
PROM1-212ENST00000511270 BCANQ96GW7 911 aa9.59□□□□□ -0.87
PROM1-212ENST00000511270 ARHGEF1Q92888 912 aaKnown RBP9.57□□□□□ -0.88
PROM1-212ENST00000511270 TOP2AP11388 1531 aaKnown RBP9.56□□□□□ -0.88
PROM1-212ENST00000511270 PEG3Q9GZU2 1588 aa9.56□□□□□ -0.88
PROM1-212ENST00000511270 SCUBE2Q9NQ36 999 aa9.56□□□□□ -0.88
PROM1-212ENST00000511270 PLPP6Q8IY26 295 aa9.55□□□□□ -0.88
PROM1-212ENST00000511270 SLC34A2O95436 690 aa9.51□□□□□ -0.89
PROM1-212ENST00000511270 SMARCA2P51531 1590 aa9.5□□□□□ -0.89
PROM1-212ENST00000511270 NBR1Q14596 966 aa9.5□□□□□ -0.89
PROM1-212ENST00000511270 ATAD2BQ9ULI0 1458 aa9.5□□□□□ -0.89
PROM1-212ENST00000511270 EMILIN3Q9NT22 766 aa9.49□□□□□ -0.89
PROM1-212ENST00000511270 EIF4G1Q04637 1599 aaKnown RBP9.49□□□□□ -0.89
PROM1-212ENST00000511270 CCDC88BA6NC98 1476 aa9.48□□□□□ -0.89
PROM1-212ENST00000511270 SLAIN1Q8ND83 568 aa9.47□□□□□ -0.89
PROM1-212ENST00000511270 OXER1Q8TDS5 423 aa9.47□□□□□ -0.89
PROM1-212ENST00000511270 LHX8Q68G74 356 aa9.46□□□□□ -0.9
PROM1-212ENST00000511270 PTCD2Q8WV60 388 aaKnown RBP9.46□□□□□ -0.9
PROM1-212ENST00000511270 PDIA6Q15084 440 aa9.45□□□□□ -0.9
PROM1-212ENST00000511270 SPDYE16A6NNV3 312 aaPredicted RBP9.44□□□□□ -0.9
PROM1-212ENST00000511270 OTUD5Q96G74 571 aa9.44□□□□□ -0.9
PROM1-212ENST00000511270 DPYSL4O14531 572 aa9.42□□□□□ -0.9
PROM1-212ENST00000511270 BAZ1BQ9UIG0 1483 aaKnown RBP9.41□□□□□ -0.9
PROM1-212ENST00000511270 TBC1D12O60347 775 aa9.41□□□□□ -0.9
PROM1-212ENST00000511270 DOK7Q18PE1 504 aa9.41□□□□□ -0.9
PROM1-212ENST00000511270 ZSWIM6Q9HCJ5 1215 aa9.41□□□□□ -0.9
PROM1-212ENST00000511270 TESPA1A2RU30 521 aaPredicted RBP9.39□□□□□ -0.91
PROM1-212ENST00000511270 SNPHO15079 494 aa9.39□□□□□ -0.91
PROM1-212ENST00000511270 HOXB3P14651 431 aaPredicted RBP9.39□□□□□ -0.91
PROM1-212ENST00000511270 MAP3K9P80192 1104 aa9.39□□□□□ -0.91
PROM1-212ENST00000511270 HMGXB3Q12766 1538 aa9.39□□□□□ -0.91
PROM1-212ENST00000511270 NCAPD3P42695 1498 aa9.39□□□□□ -0.91
PROM1-212ENST00000511270 RIMBP2O15034 1052 aa9.37□□□□□ -0.91
PROM1-212ENST00000511270 SEMA3EO15041 775 aa9.37□□□□□ -0.91
PROM1-212ENST00000511270 UPF1Q92900 1129 aaKnown RBP eCLIP9.37□□□□□ -0.91
PROM1-212ENST00000511270 ZNF316A6NFI3 1004 aaPredicted RBP9.36□□□□□ -0.91
PROM1-212ENST00000511270 PTGER2P43116 358 aa9.36□□□□□ -0.91
PROM1-212ENST00000511270 PCDHGA4Q9Y5G9 962 aa9.36□□□□□ -0.91
PROM1-212ENST00000511270 CC2D2AQ9P2K1 1620 aa9.35□□□□□ -0.91
PROM1-212ENST00000511270 TULP1O00294 542 aaPredicted RBP9.35□□□□□ -0.91
PROM1-212ENST00000511270 ANO8Q9HCE9 1232 aaPredicted RBP9.35□□□□□ -0.91
PROM1-212ENST00000511270 KDM4FA0A1W2PPD8 638 aa9.34□□□□□ -0.91
PROM1-212ENST00000511270 SMYD5Q6GMV2 418 aa9.34□□□□□ -0.91
PROM1-212ENST00000511270 EVI5O60447 810 aa9.33□□□□□ -0.92
PROM1-212ENST00000511270 GPR153Q6NV75 609 aa9.32□□□□□ -0.92
PROM1-212ENST00000511270 ABCC8Q09428 1581 aa9.32□□□□□ -0.92
PROM1-212ENST00000511270 ZNF710Q8N1W2 664 aa9.31□□□□□ -0.92
PROM1-212ENST00000511270 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.29□□□□□ -0.92
PROM1-212ENST00000511270 PRKCSHP14314 528 aaPredicted RBP9.28□□□□□ -0.92
PROM1-212ENST00000511270 MLLT3P42568 568 aaPredicted RBP9.28□□□□□ -0.92
PROM1-212ENST00000511270 HOXB1P14653 301 aaPredicted RBP9.27□□□□□ -0.93
PROM1-212ENST00000511270 PRDM2Q13029 1718 aa9.26□□□□□ -0.93
PROM1-212ENST00000511270 ARSIQ5FYB1 569 aa9.26□□□□□ -0.93
PROM1-212ENST00000511270 LMOD2Q6P5Q4 547 aa9.26□□□□□ -0.93
PROM1-212ENST00000511270 PHF14O94880 888 aa9.25□□□□□ -0.93
PROM1-212ENST00000511270 JPH4Q96JJ6 628 aa9.25□□□□□ -0.93
PROM1-212ENST00000511270 NUDT7P0C024 238 aa9.24□□□□□ -0.93
PROM1-212ENST00000511270 EPAS1Q99814 870 aa9.24□□□□□ -0.93
PROM1-212ENST00000511270 LOC105371045A0A1W2PR82 267 aa9.23□□□□□ -0.93
PROM1-212ENST00000511270 PSDA5PKW4 1024 aaPredicted RBP9.23□□□□□ -0.93
PROM1-212ENST00000511270 OSBPP22059 807 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms