RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 MICALL2Q8IY33 904 aa10.26□□□□□ -0.77
MBD4-209ENST00000511009 TMEM92Q6UXU6 159 aa10.24□□□□□ -0.77
MBD4-209ENST00000511009 NKX1-1Q15270 411 aaPredicted RBP10.23□□□□□ -0.77
MBD4-209ENST00000511009 C3orf67Q6ZVT6 689 aa10.23□□□□□ -0.77
MBD4-209ENST00000511009 TPRNQ4KMQ1 711 aa10.2□□□□□ -0.78
MBD4-209ENST00000511009 PPP1R37O75864 691 aa10.18□□□□□ -0.78
MBD4-209ENST00000511009 FAM163AQ96GL9 167 aaPredicted RBP10.18□□□□□ -0.78
MBD4-209ENST00000511009 ST18O60284 1047 aa10.16□□□□□ -0.78
MBD4-209ENST00000511009 NBR1Q14596 966 aa10.16□□□□□ -0.78
MBD4-209ENST00000511009 POTEMA6NI47 508 aa10.15□□□□□ -0.78
MBD4-209ENST00000511009 HOXB3P14651 431 aaPredicted RBP10.15□□□□□ -0.78
MBD4-209ENST00000511009 POTEGQ6S5H5 508 aa10.14□□□□□ -0.79
MBD4-209ENST00000511009 G3V3G9 751 aa10.12□□□□□ -0.79
MBD4-209ENST00000511009 KIF3CO14782 793 aa10.12□□□□□ -0.79
MBD4-209ENST00000511009 GTPBP6O43824 516 aaPredicted RBP10.1□□□□□ -0.79
MBD4-209ENST00000511009 SNPHO15079 494 aa10.09□□□□□ -0.79
MBD4-209ENST00000511009 RYDENQ9NUL5 291 aaKnown RBP10.09□□□□□ -0.79
MBD4-209ENST00000511009 C2orf72A6NCS6 295 aa10.03□□□□□ -0.8
MBD4-209ENST00000511009 POTEB3A0JP26 581 aa9.99□□□□□ -0.81
MBD4-209ENST00000511009 POTEBQ6S5H4 581 aa9.99□□□□□ -0.81
MBD4-209ENST00000511009 MARVELD3Q96A59 401 aa9.99□□□□□ -0.81
MBD4-209ENST00000511009 HOXB1P14653 301 aaPredicted RBP9.98□□□□□ -0.81
MBD4-209ENST00000511009 DOK7Q18PE1 504 aa9.97□□□□□ -0.81
MBD4-209ENST00000511009 GPR153Q6NV75 609 aa9.97□□□□□ -0.81
MBD4-209ENST00000511009 PCDH10Q9P2E7 1040 aa9.96□□□□□ -0.82
MBD4-209ENST00000511009 ZSWIM6Q9HCJ5 1215 aa9.95□□□□□ -0.82
MBD4-209ENST00000511009 GPHNQ9NQX3 736 aaPredicted RBP9.94□□□□□ -0.82
MBD4-209ENST00000511009 CRISPLD2Q9H0B8 497 aa9.93□□□□□ -0.82
MBD4-209ENST00000511009 NCKAP5LQ9HCH0 1330 aa9.92□□□□□ -0.82
MBD4-209ENST00000511009 SLC34A2O95436 690 aa9.92□□□□□ -0.82
MBD4-209ENST00000511009 FOXK1P85037 733 aa9.91□□□□□ -0.82
MBD4-209ENST00000511009 CDAN1Q8IWY9 1227 aa9.91□□□□□ -0.82
MBD4-209ENST00000511009 TMC2Q8TDI7 906 aa9.91□□□□□ -0.82
MBD4-209ENST00000511009 EMP3P54852 163 aa9.9□□□□□ -0.82
MBD4-209ENST00000511009 P3H3Q8IVL6 736 aa9.9□□□□□ -0.82
MBD4-209ENST00000511009 DSG2Q14126 1118 aa9.89□□□□□ -0.83
MBD4-209ENST00000511009 ZNF710Q8N1W2 664 aa9.89□□□□□ -0.83
MBD4-209ENST00000511009 HS3ST6Q96QI5 342 aa9.89□□□□□ -0.83
MBD4-209ENST00000511009 WDR70Q9NW82 654 aa9.89□□□□□ -0.83
MBD4-209ENST00000511009 KDM4FA0A1W2PPD8 638 aa9.88□□□□□ -0.83
MBD4-209ENST00000511009 KHSRPQ92945 711 aaKnown RBP eCLIP9.88□□□□□ -0.83
MBD4-209ENST00000511009 RIMBP2O15034 1052 aa9.87□□□□□ -0.83
MBD4-209ENST00000511009 ARSIQ5FYB1 569 aa9.87□□□□□ -0.83
MBD4-209ENST00000511009 CADPS2Q86UW7 1296 aa9.87□□□□□ -0.83
MBD4-209ENST00000511009 FAM205CA6NFA0 338 aa9.86□□□□□ -0.83
MBD4-209ENST00000511009 PLPP6Q8IY26 295 aa9.85□□□□□ -0.83
MBD4-209ENST00000511009 KRTAP3-3Q9BYR6 98 aa9.85□□□□□ -0.83
MBD4-209ENST00000511009 KRTAP3-2Q9BYR7 98 aa9.85□□□□□ -0.83
MBD4-209ENST00000511009 PTCD2Q8WV60 388 aaKnown RBP9.84□□□□□ -0.83
MBD4-209ENST00000511009 PCDHGA4Q9Y5G9 962 aa9.84□□□□□ -0.83
MBD4-209ENST00000511009 MFSD10Q14728 455 aa9.83□□□□□ -0.84
MBD4-209ENST00000511009 PPP1R15BQ5SWA1 713 aa9.79□□□□□ -0.84
MBD4-209ENST00000511009 NUDT7P0C024 238 aa9.78□□□□□ -0.84
MBD4-209ENST00000511009 PDE4AP27815 886 aa9.78□□□□□ -0.84
MBD4-209ENST00000511009 VARS2Q5ST30 1063 aaKnown RBP9.78□□□□□ -0.84
MBD4-209ENST00000511009 OXER1Q8TDS5 423 aa9.78□□□□□ -0.84
MBD4-209ENST00000511009 ERBB3P21860 1342 aa9.78□□□□□ -0.84
MBD4-209ENST00000511009 ZNF316A6NFI3 1004 aaPredicted RBP9.77□□□□□ -0.85
MBD4-209ENST00000511009 ZNF687Q8N1G0 1237 aa9.75□□□□□ -0.85
MBD4-209ENST00000511009 KCNV2Q8TDN2 545 aa9.75□□□□□ -0.85
MBD4-209ENST00000511009 LARP6Q9BRS8 491 aaKnown RBP9.75□□□□□ -0.85
MBD4-209ENST00000511009 LHX6Q9UPM6 363 aa9.74□□□□□ -0.85
MBD4-209ENST00000511009 TULP1O00294 542 aaPredicted RBP9.73□□□□□ -0.85
MBD4-209ENST00000511009 PLSCR2Q9NRY7 297 aa9.73□□□□□ -0.85
MBD4-209ENST00000511009 POTEEQ6S8J3 1075 aa9.72□□□□□ -0.85
MBD4-209ENST00000511009 DDX27Q96GQ7 796 aaKnown RBP9.72□□□□□ -0.85
MBD4-209ENST00000511009 SPNS2Q8IVW8 549 aa9.71□□□□□ -0.86
MBD4-209ENST00000511009 EMILIN3Q9NT22 766 aa9.71□□□□□ -0.86
MBD4-209ENST00000511009 CAMK2BQ13554 666 aa9.7□□□□□ -0.86
MBD4-209ENST00000511009 LMOD2Q6P5Q4 547 aa9.68□□□□□ -0.86
MBD4-209ENST00000511009 UPF1Q92900 1129 aaKnown RBP eCLIP9.66□□□□□ -0.86
MBD4-209ENST00000511009 ANO8Q9HCE9 1232 aaPredicted RBP9.66□□□□□ -0.86
MBD4-209ENST00000511009 E2F4Q16254 413 aa9.65□□□□□ -0.86
MBD4-209ENST00000511009 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.65□□□□□ -0.86
MBD4-209ENST00000511009 ARHGEF1Q92888 912 aaKnown RBP9.65□□□□□ -0.86
MBD4-209ENST00000511009 TBC1D12O60347 775 aa9.64□□□□□ -0.87
MBD4-209ENST00000511009 MMRN1Q13201 1228 aa9.63□□□□□ -0.87
MBD4-209ENST00000511009 PSDA5PKW4 1024 aaPredicted RBP9.6□□□□□ -0.87
MBD4-209ENST00000511009 PBX2P40425 430 aa9.6□□□□□ -0.87
MBD4-209ENST00000511009 EVI5O60447 810 aa9.59□□□□□ -0.87
MBD4-209ENST00000511009 FOSBP53539 338 aa9.58□□□□□ -0.88
MBD4-209ENST00000511009 AXIN2Q9Y2T1 843 aa9.58□□□□□ -0.88
MBD4-209ENST00000511009 LSM11P83369 360 aaKnown RBP eCLIP9.57□□□□□ -0.88
MBD4-209ENST00000511009 GTF3C3Q9Y5Q9 886 aa9.57□□□□□ -0.88
MBD4-209ENST00000511009 TMEM132AQ24JP5 1023 aa9.56□□□□□ -0.88
MBD4-209ENST00000511009 JPH4Q96JJ6 628 aa9.55□□□□□ -0.88
MBD4-209ENST00000511009 DPYSL4O14531 572 aa9.54□□□□□ -0.88
MBD4-209ENST00000511009 ARHGAP33O14559 1287 aa9.54□□□□□ -0.88
MBD4-209ENST00000511009 SEMA3EO15041 775 aa9.54□□□□□ -0.88
MBD4-209ENST00000511009 PPP4R3BQ5MIZ7 849 aa9.54□□□□□ -0.88
MBD4-209ENST00000511009 ARIH1Q9Y4X5 557 aaPredicted RBP9.54□□□□□ -0.88
MBD4-209ENST00000511009 MAP3K9P80192 1104 aa9.53□□□□□ -0.88
MBD4-209ENST00000511009 DMRTA1Q5VZB9 504 aa9.53□□□□□ -0.88
MBD4-209ENST00000511009 SMYD5Q6GMV2 418 aa9.53□□□□□ -0.88
MBD4-209ENST00000511009 TESPA1A2RU30 521 aaPredicted RBP9.52□□□□□ -0.89
MBD4-209ENST00000511009 PSEN2P49810 448 aa9.52□□□□□ -0.89
MBD4-209ENST00000511009 ZNF454Q8N9F8 522 aa9.52□□□□□ -0.89
MBD4-209ENST00000511009 BCL2L12Q9HB09 334 aa9.52□□□□□ -0.89
MBD4-209ENST00000511009 ZC3H15Q8WU90 426 aaKnown RBP9.51□□□□□ -0.89
MBD4-209ENST00000511009 PCDHGA10Q9Y5H3 936 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms