RNA–Protein interactions for RNA: ENST00000510667.5

LINC01088-206, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 534 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-206ENST00000510667 BAZ1BQ9UIG0 1483 aaKnown RBP12.85□□□□□ -0.35
LINC01088-206ENST00000510667 HS6ST3Q8IZP7 471 aa12.85□□□□□ -0.35
LINC01088-206ENST00000510667 PHF8Q9UPP1 1060 aa12.85□□□□□ -0.35
LINC01088-206ENST00000510667 SOX12O15370 315 aa12.82□□□□□ -0.36
LINC01088-206ENST00000510667 MS4A4AQ96JQ5 239 aa12.81□□□□□ -0.36
LINC01088-206ENST00000510667 MFRPQ9BY79 579 aa12.8□□□□□ -0.36
LINC01088-206ENST00000510667 KIF21AQ7Z4S6 1674 aa12.79□□□□□ -0.36
LINC01088-206ENST00000510667 RSF1Q96T23 1441 aaPredicted RBP12.78□□□□□ -0.36
LINC01088-206ENST00000510667 FBXO22Q8NEZ5 403 aa12.77□□□□□ -0.37
LINC01088-206ENST00000510667 MAMSTRQ6ZN01 415 aa12.76□□□□□ -0.37
LINC01088-206ENST00000510667 SCUBE2Q9NQ36 999 aa12.75□□□□□ -0.37
LINC01088-206ENST00000510667 PDS5BQ9NTI5 1447 aa12.75□□□□□ -0.37
LINC01088-206ENST00000510667 NLRP6P59044 892 aa12.74□□□□□ -0.37
LINC01088-206ENST00000510667 NKX1-1Q15270 411 aaPredicted RBP12.73□□□□□ -0.37
LINC01088-206ENST00000510667 L3MBTL3Q96JM7 780 aaPredicted RBP12.72□□□□□ -0.37
LINC01088-206ENST00000510667 BOLA1Q9Y3E2 137 aa12.7□□□□□ -0.38
LINC01088-206ENST00000510667 WDR62O43379 1518 aa12.68□□□□□ -0.38
LINC01088-206ENST00000510667 MRC2Q9UBG0 1479 aa12.66□□□□□ -0.38
LINC01088-206ENST00000510667 CADPSQ9ULU8 1353 aa12.66□□□□□ -0.38
LINC01088-206ENST00000510667 WIZO95785 1651 aa12.65□□□□□ -0.38
LINC01088-206ENST00000510667 C3orf67Q6ZVT6 689 aa12.65□□□□□ -0.38
LINC01088-206ENST00000510667 MICALL2Q8IY33 904 aa12.65□□□□□ -0.38
LINC01088-206ENST00000510667 TOP2AP11388 1531 aaKnown RBP12.64□□□□□ -0.39
LINC01088-206ENST00000510667 G3V3G9 751 aa12.64□□□□□ -0.39
LINC01088-206ENST00000510667 PPP1R37O75864 691 aa12.64□□□□□ -0.39
LINC01088-206ENST00000510667 SLAIN1Q8ND83 568 aa12.64□□□□□ -0.39
LINC01088-206ENST00000510667 TMEM121BQ9BXQ6 578 aaPredicted RBP12.64□□□□□ -0.39
LINC01088-206ENST00000510667 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.64□□□□□ -0.39
LINC01088-206ENST00000510667 PLSCR2Q9NRY7 297 aa12.61□□□□□ -0.39
LINC01088-206ENST00000510667 GTPBP6O43824 516 aaPredicted RBP12.55□□□□□ -0.4
LINC01088-206ENST00000510667 TMEM92Q6UXU6 159 aa12.55□□□□□ -0.4
LINC01088-206ENST00000510667 CEP164Q9UPV0 1460 aa12.53□□□□□ -0.4
LINC01088-206ENST00000510667 CFTRP13569 1480 aa12.53□□□□□ -0.4
LINC01088-206ENST00000510667 BBXQ8WY36 941 aaPredicted RBP12.51□□□□□ -0.41
LINC01088-206ENST00000510667 FANCD2Q9BXW9 1451 aa12.49□□□□□ -0.41
LINC01088-206ENST00000510667 CCDC88BA6NC98 1476 aa12.47□□□□□ -0.41
LINC01088-206ENST00000510667 RYDENQ9NUL5 291 aaKnown RBP12.47□□□□□ -0.41
LINC01088-206ENST00000510667 LCE2DQ5TA82 110 aaPredicted RBP12.45□□□□□ -0.42
LINC01088-206ENST00000510667 RIMBP3CA6NJZ7 1639 aa12.44□□□□□ -0.42
LINC01088-206ENST00000510667 RIMBP3BA6NNM3 1639 aa12.44□□□□□ -0.42
LINC01088-206ENST00000510667 RIMBP3Q9UFD9 1639 aa12.44□□□□□ -0.42
LINC01088-206ENST00000510667 URB2Q14146 1524 aaKnown RBP12.44□□□□□ -0.42
LINC01088-206ENST00000510667 FAM163AQ96GL9 167 aaPredicted RBP12.44□□□□□ -0.42
LINC01088-206ENST00000510667 C2orf72A6NCS6 295 aa12.4□□□□□ -0.42
LINC01088-206ENST00000510667 KIF3CO14782 793 aa12.39□□□□□ -0.43
LINC01088-206ENST00000510667 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.39□□□□□ -0.43
LINC01088-206ENST00000510667 ARHGEF11O15085 1522 aa12.37□□□□□ -0.43
LINC01088-206ENST00000510667 HOXB3P14651 431 aaPredicted RBP12.37□□□□□ -0.43
LINC01088-206ENST00000510667 ST18O60284 1047 aa12.36□□□□□ -0.43
LINC01088-206ENST00000510667 SNPHO15079 494 aa12.35□□□□□ -0.43
LINC01088-206ENST00000510667 PAXIP1Q6ZW49 1069 aaPredicted RBP12.35□□□□□ -0.43
LINC01088-206ENST00000510667 SPRYD3Q8NCJ5 442 aa12.35□□□□□ -0.43
LINC01088-206ENST00000510667 TMC2Q8TDI7 906 aa12.35□□□□□ -0.43
LINC01088-206ENST00000510667 PRDM2Q13029 1718 aa12.34□□□□□ -0.43
LINC01088-206ENST00000510667 SUPT5HO00267 1087 aaKnown RBP12.34□□□□□ -0.43
LINC01088-206ENST00000510667 CFAP44Q96MT7 982 aa12.34□□□□□ -0.43
LINC01088-206ENST00000510667 IFT140Q96RY7 1462 aa12.33□□□□□ -0.44
LINC01088-206ENST00000510667 CADPS2Q86UW7 1296 aa12.32□□□□□ -0.44
LINC01088-206ENST00000510667 ZNF608Q9ULD9 1512 aaPredicted RBP12.32□□□□□ -0.44
LINC01088-206ENST00000510667 NCKAP5LQ9HCH0 1330 aa12.3□□□□□ -0.44
LINC01088-206ENST00000510667 GPHNQ9NQX3 736 aaPredicted RBP12.29□□□□□ -0.44
LINC01088-206ENST00000510667 CRISPLD2Q9H0B8 497 aa12.28□□□□□ -0.44
LINC01088-206ENST00000510667 DOK7Q18PE1 504 aa12.27□□□□□ -0.45
LINC01088-206ENST00000510667 DSG2Q14126 1118 aa12.26□□□□□ -0.45
LINC01088-206ENST00000510667 POTEGQ6S5H5 508 aa12.26□□□□□ -0.45
LINC01088-206ENST00000510667 POTEMA6NI47 508 aa12.25□□□□□ -0.45
LINC01088-206ENST00000510667 ABCC8Q09428 1581 aa12.25□□□□□ -0.45
LINC01088-206ENST00000510667 EIF4G3O43432 1585 aaKnown RBP12.24□□□□□ -0.45
LINC01088-206ENST00000510667 FOXK1P85037 733 aa12.24□□□□□ -0.45
LINC01088-206ENST00000510667 ZNF710Q8N1W2 664 aa12.24□□□□□ -0.45
LINC01088-206ENST00000510667 TOPBP1Q92547 1522 aa12.24□□□□□ -0.45
LINC01088-206ENST00000510667 MARVELD3Q96A59 401 aa12.24□□□□□ -0.45
LINC01088-206ENST00000510667 ARAP1Q96P48 1450 aa12.23□□□□□ -0.45
LINC01088-206ENST00000510667 PLPP6Q8IY26 295 aa12.23□□□□□ -0.45
LINC01088-206ENST00000510667 CYB5RLQ6IPT4 315 aa12.21□□□□□ -0.45
LINC01088-206ENST00000510667 CHD1O14646 1710 aa12.2□□□□□ -0.46
LINC01088-206ENST00000510667 TARBP1Q13395 1621 aaKnown RBP12.2□□□□□ -0.46
LINC01088-206ENST00000510667 PDE4AP27815 886 aa12.2□□□□□ -0.46
LINC01088-206ENST00000510667 LARP6Q9BRS8 491 aaKnown RBP12.2□□□□□ -0.46
LINC01088-206ENST00000510667 DNMBPQ6XZF7 1577 aa12.19□□□□□ -0.46
LINC01088-206ENST00000510667 RIMBP2O15034 1052 aa12.18□□□□□ -0.46
LINC01088-206ENST00000510667 HOXB1P14653 301 aaPredicted RBP12.18□□□□□ -0.46
LINC01088-206ENST00000510667 PPP1R15BQ5SWA1 713 aa12.18□□□□□ -0.46
LINC01088-206ENST00000510667 GPR153Q6NV75 609 aa12.18□□□□□ -0.46
LINC01088-206ENST00000510667 KHSRPQ92945 711 aaKnown RBP eCLIP12.18□□□□□ -0.467e-7■■□□□ 12.3
LINC01088-206ENST00000510667 ARSIQ5FYB1 569 aa12.17□□□□□ -0.46
LINC01088-206ENST00000510667 EMP3P54852 163 aa12.16□□□□□ -0.46
LINC01088-206ENST00000510667 SLC34A2O95436 690 aa12.15□□□□□ -0.46
LINC01088-206ENST00000510667 MFSD10Q14728 455 aa12.15□□□□□ -0.46
LINC01088-206ENST00000510667 DDX27Q96GQ7 796 aaKnown RBP12.15□□□□□ -0.46
LINC01088-206ENST00000510667 ZSWIM6Q9HCJ5 1215 aa12.15□□□□□ -0.46
LINC01088-206ENST00000510667 AQRO60306 1485 aaKnown RBP eCLIP12.14□□□□□ -0.476e-6■■■■□ 25.1
LINC01088-206ENST00000510667 TSHZ2Q9NRE2 1034 aa12.13□□□□□ -0.47
LINC01088-206ENST00000510667 PCDHGA4Q9Y5G9 962 aa12.13□□□□□ -0.47
LINC01088-206ENST00000510667 POLA1P09884 1462 aaPredicted RBP12.13□□□□□ -0.47
LINC01088-206ENST00000510667 CLASP1Q7Z460 1538 aa12.11□□□□□ -0.47
LINC01088-206ENST00000510667 POTEB3A0JP26 581 aa12.11□□□□□ -0.47
LINC01088-206ENST00000510667 POTEBQ6S5H4 581 aa12.11□□□□□ -0.47
LINC01088-206ENST00000510667 FAM205CA6NFA0 338 aa12.1□□□□□ -0.47
LINC01088-206ENST00000510667 PLCB2Q00722 1185 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms