RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 TROQ12816 1431 aaPredicted RBP16.47■□□□□ 0.23
SCARB2-204ENST00000509994 SCAPERQ9BY12 1400 aa16.47■□□□□ 0.23
SCARB2-204ENST00000509994 ZMYM4Q5VZL5 1548 aa16.47■□□□□ 0.23
SCARB2-204ENST00000509994 PLPPR3Q6T4P5 718 aa16.46■□□□□ 0.23
SCARB2-204ENST00000509994 MYT1LQ9UL68 1186 aa16.46■□□□□ 0.23
SCARB2-204ENST00000509994 PTPRMP28827 1452 aa16.46■□□□□ 0.23
SCARB2-204ENST00000509994 CCDC18Q5T9S5 1454 aa16.46■□□□□ 0.23
SCARB2-204ENST00000509994 EFCAB2Q5VUJ9 269 aa16.45■□□□□ 0.22
SCARB2-204ENST00000509994 POGZQ7Z3K3 1410 aa16.45■□□□□ 0.22
SCARB2-204ENST00000509994 CASKIN1Q8WXD9 1431 aa16.43■□□□□ 0.22
SCARB2-204ENST00000509994 YEATS2Q9ULM3 1422 aa16.43■□□□□ 0.22
SCARB2-204ENST00000509994 MLECQ14165 292 aa16.42■□□□□ 0.22
SCARB2-204ENST00000509994 MAGI2Q86UL8 1455 aa16.42■□□□□ 0.22
SCARB2-204ENST00000509994 FYCO1Q9BQS8 1478 aa16.41■□□□□ 0.22
SCARB2-204ENST00000509994 FER1L4A9Z1Z3 1794 aa16.41■□□□□ 0.22
SCARB2-204ENST00000509994 CDC42BPBQ9Y5S2 1711 aa16.4■□□□□ 0.22
SCARB2-204ENST00000509994 PREX2Q70Z35 1606 aa16.39■□□□□ 0.21
SCARB2-204ENST00000509994 SIGLEC1Q9BZZ2 1709 aa16.39■□□□□ 0.21
SCARB2-204ENST00000509994 ZNF518AQ6AHZ1 1483 aa16.38■□□□□ 0.21
SCARB2-204ENST00000509994 CDC42BPAQ5VT25 1732 aa16.36■□□□□ 0.21
SCARB2-204ENST00000509994 C9orf84Q5VXU9 1444 aa16.36■□□□□ 0.21
SCARB2-204ENST00000509994 ATP10AO60312 1499 aa16.35■□□□□ 0.21
SCARB2-204ENST00000509994 ITSN2Q9NZM3 1697 aa16.34■□□□□ 0.21
SCARB2-204ENST00000509994 KDM5CP41229 1560 aa16.32■□□□□ 0.2
SCARB2-204ENST00000509994 AFAP1Q8N556 730 aa16.32■□□□□ 0.2
SCARB2-204ENST00000509994 ZNF777Q9ULD5 760 aaPredicted RBP16.32■□□□□ 0.2
SCARB2-204ENST00000509994 ABCC1P33527 1531 aa16.31■□□□□ 0.2
SCARB2-204ENST00000509994 ILDR1Q86SU0 546 aaPredicted RBP16.3■□□□□ 0.2
SCARB2-204ENST00000509994 ABCA6Q8N139 1617 aa16.29■□□□□ 0.2
SCARB2-204ENST00000509994 DIP2CQ9Y2E4 1556 aa16.29■□□□□ 0.2
SCARB2-204ENST00000509994 MTUS2Q5JR59 1369 aa16.28■□□□□ 0.2
SCARB2-204ENST00000509994 LMTK3Q96Q04 1460 aa16.28■□□□□ 0.2
SCARB2-204ENST00000509994 TRAPPC8Q9Y2L5 1435 aa16.27■□□□□ 0.19
SCARB2-204ENST00000509994 ARHGEF12Q9NZN5 1544 aa16.26■□□□□ 0.19
SCARB2-204ENST00000509994 SENP3Q9H4L4 574 aaPredicted RBP16.26■□□□□ 0.19
SCARB2-204ENST00000509994 ESF1Q9H501 851 aaKnown RBP16.26■□□□□ 0.19
SCARB2-204ENST00000509994 CEP162Q5TB80 1403 aa16.26■□□□□ 0.19
SCARB2-204ENST00000509994 SYCP2Q9BX26 1530 aa16.25■□□□□ 0.19
SCARB2-204ENST00000509994 SAMD9LQ8IVG5 1584 aa16.25■□□□□ 0.19
SCARB2-204ENST00000509994 CCNB3Q8WWL7 1395 aa16.25■□□□□ 0.19
SCARB2-204ENST00000509994 HSPA2P54652 639 aa16.24■□□□□ 0.19
SCARB2-204ENST00000509994 MLH3Q9UHC1 1453 aa16.23■□□□□ 0.19
SCARB2-204ENST00000509994 PREX1Q8TCU6 1659 aa16.23■□□□□ 0.19
SCARB2-204ENST00000509994 KIDINS220Q9ULH0 1771 aa16.23■□□□□ 0.19
SCARB2-204ENST00000509994 CFDP1Q9UEE9 299 aaPredicted RBP16.22■□□□□ 0.19
SCARB2-204ENST00000509994 REREQ9P2R6 1566 aa16.21■□□□□ 0.19
SCARB2-204ENST00000509994 EHBP1L1Q8N3D4 1523 aa16.21■□□□□ 0.19
SCARB2-204ENST00000509994 GPATCH8Q9UKJ3 1502 aaKnown RBP16.21■□□□□ 0.19
SCARB2-204ENST00000509994 SUPT6HQ7KZ85 1726 aaKnown RBP16.2■□□□□ 0.18
SCARB2-204ENST00000509994 CEBPAP49715 358 aaPredicted RBP16.2■□□□□ 0.18
SCARB2-204ENST00000509994 HNRNPMP52272 730 aaKnown RBP eCLIP16.2■□□□□ 0.18
SCARB2-204ENST00000509994 SPAG9O60271 1321 aaKnown RBP16.19■□□□□ 0.18
SCARB2-204ENST00000509994 PLEKHH2Q8IVE3 1493 aa16.19■□□□□ 0.18
SCARB2-204ENST00000509994 ATP7AQ04656 1500 aa16.17■□□□□ 0.18
SCARB2-204ENST00000509994 C3P01024 1663 aa16.17■□□□□ 0.18
SCARB2-204ENST00000509994 TIAM1Q13009 1591 aa16.17■□□□□ 0.18
SCARB2-204ENST00000509994 AGLP35573 1532 aa16.15■□□□□ 0.18
SCARB2-204ENST00000509994 UHRF1BP1Q6BDS2 1440 aa16.14■□□□□ 0.17
SCARB2-204ENST00000509994 SETD1BQ9UPS6 1966 aaKnown RBP16.14■□□□□ 0.17
SCARB2-204ENST00000509994 INO80Q9ULG1 1556 aaPredicted RBP16.13■□□□□ 0.17
SCARB2-204ENST00000509994 KIAA1107Q9UPP5 1409 aa16.12■□□□□ 0.17
SCARB2-204ENST00000509994 ADGBQ8N7X0 1667 aa16.11■□□□□ 0.17
SCARB2-204ENST00000509994 LOC105371045A0A1W2PR82 267 aa16.11■□□□□ 0.17
SCARB2-204ENST00000509994 CNTLNQ9NXG0 1405 aa16.11■□□□□ 0.17
SCARB2-204ENST00000509994 FBXO41Q8TF61 875 aa16.1■□□□□ 0.17
SCARB2-204ENST00000509994 CLTCQ00610 1675 aaKnown RBP16.09■□□□□ 0.17
SCARB2-204ENST00000509994 PHF23Q9BUL5 403 aaPredicted RBP16.09■□□□□ 0.17
SCARB2-204ENST00000509994 ZNF644Q9H582 1327 aaPredicted RBP16.09■□□□□ 0.17
SCARB2-204ENST00000509994 A2MP01023 1474 aa16.09■□□□□ 0.17
SCARB2-204ENST00000509994 MROH2AA6NES4 1674 aa16.08■□□□□ 0.17
SCARB2-204ENST00000509994 NCOA2Q15596 1464 aa16.08■□□□□ 0.16
SCARB2-204ENST00000509994 VPS8Q8N3P4 1428 aa16.06■□□□□ 0.16
SCARB2-204ENST00000509994 GGT6Q6P531 493 aa16.06■□□□□ 0.16
SCARB2-204ENST00000509994 PLXNC1O60486 1568 aa16.05■□□□□ 0.16
SCARB2-204ENST00000509994 CAMSAP2Q08AD1 1489 aa16.05■□□□□ 0.16
SCARB2-204ENST00000509994 STRCQ7RTU9 1775 aa16.04■□□□□ 0.16
SCARB2-204ENST00000509994 CCDC141Q6ZP82 1450 aa16.03■□□□□ 0.16
SCARB2-204ENST00000509994 DMRT2Q9Y5R5 561 aa16.02■□□□□ 0.16
SCARB2-204ENST00000509994 MBD5Q9P267 1494 aa16.01■□□□□ 0.15
SCARB2-204ENST00000509994 ZMYM3Q14202 1370 aa16■□□□□ 0.15
SCARB2-204ENST00000509994 LRRC9Q6ZRR7 1453 aa16■□□□□ 0.15
SCARB2-204ENST00000509994 MYO3AQ8NEV4 1616 aa15.99■□□□□ 0.15
SCARB2-204ENST00000509994 CERKQ8TCT0 537 aa15.99■□□□□ 0.15
SCARB2-204ENST00000509994 NPATQ14207 1427 aa15.99■□□□□ 0.15
SCARB2-204ENST00000509994 RTEL1-TNFRSF6BF6WH68 1400 aa15.98■□□□□ 0.15
SCARB2-204ENST00000509994 APLP2Q06481 763 aa15.98■□□□□ 0.15
SCARB2-204ENST00000509994 TSPY4P0CV99 314 aa15.97■□□□□ 0.15
SCARB2-204ENST00000509994 TSPY10P0CW01 314 aa15.97■□□□□ 0.15
SCARB2-204ENST00000509994 CAMSAP1Q5T5Y3 1602 aa15.97■□□□□ 0.15
SCARB2-204ENST00000509994 KIF3BO15066 747 aa15.96■□□□□ 0.15
SCARB2-204ENST00000509994 ARHGEF5Q12774 1597 aa15.96■□□□□ 0.14
SCARB2-204ENST00000509994 RSPH4AQ5TD94 716 aa15.95■□□□□ 0.14
SCARB2-204ENST00000509994 DHX29Q7Z478 1369 aaKnown RBP15.95■□□□□ 0.14
SCARB2-204ENST00000509994 ZNF142P52746 1687 aaPredicted RBP15.95■□□□□ 0.14
SCARB2-204ENST00000509994 CEP170BQ9Y4F5 1589 aaPredicted RBP15.93■□□□□ 0.14
SCARB2-204ENST00000509994 NCOA1Q15788 1441 aa15.93■□□□□ 0.14
SCARB2-204ENST00000509994 KANK4Q5T7N3 995 aaPredicted RBP15.92■□□□□ 0.14
SCARB2-204ENST00000509994 PPP6R1Q9UPN7 881 aa15.92■□□□□ 0.14
SCARB2-204ENST00000509994 MAP3K1Q13233 1512 aa15.92■□□□□ 0.14
SCARB2-204ENST00000509994 KDM5DQ9BY66 1539 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms