RNA–Protein interactions for RNA: ENST00000509751.1

HTT-207, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 723 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-207ENST00000509751 DENND4BO75064 1496 aaPredicted RBP23.82■■□□□ 1.4
HTT-207ENST00000509751 CCNB3Q8WWL7 1395 aa23.82■■□□□ 1.4
HTT-207ENST00000509751 CDC42BPBQ9Y5S2 1711 aa23.81■■□□□ 1.4
HTT-207ENST00000509751 APLP2Q06481 763 aa23.81■■□□□ 1.4
HTT-207ENST00000509751 SCAPERQ9BY12 1400 aa23.81■■□□□ 1.4
HTT-207ENST00000509751 FRMPD1Q5SYB0 1578 aa23.81■■□□□ 1.4
HTT-207ENST00000509751 CDC42BPAQ5VT25 1732 aa23.81■■□□□ 1.4
HTT-207ENST00000509751 KANK4Q5T7N3 995 aaPredicted RBP23.8■■□□□ 1.4
HTT-207ENST00000509751 LRRC9Q6ZRR7 1453 aa23.8■■□□□ 1.4
HTT-207ENST00000509751 GPATCH8Q9UKJ3 1502 aaKnown RBP23.79■■□□□ 1.4
HTT-207ENST00000509751 ZNF777Q9ULD5 760 aaPredicted RBP23.79■■□□□ 1.4
HTT-207ENST00000509751 MAP3K1Q13233 1512 aa23.77■■□□□ 1.4
HTT-207ENST00000509751 NCOA2Q15596 1464 aa23.76■■□□□ 1.39
HTT-207ENST00000509751 CFDP1Q9UEE9 299 aaPredicted RBP23.75■■□□□ 1.39
HTT-207ENST00000509751 SUPT6HQ7KZ85 1726 aaKnown RBP23.75■■□□□ 1.39
HTT-207ENST00000509751 POGZQ7Z3K3 1410 aa23.75■■□□□ 1.39
HTT-207ENST00000509751 RICTORQ6R327 1708 aa23.74■■□□□ 1.39
HTT-207ENST00000509751 ABCC1P33527 1531 aa23.7■■□□□ 1.38
HTT-207ENST00000509751 SAMD9LQ8IVG5 1584 aa23.69■■□□□ 1.38
HTT-207ENST00000509751 ARHGEF12Q9NZN5 1544 aa23.69■■□□□ 1.38
HTT-207ENST00000509751 AFAP1Q8N556 730 aa23.68■■□□□ 1.38
HTT-207ENST00000509751 ITSN2Q9NZM3 1697 aa23.67■■□□□ 1.38
HTT-207ENST00000509751 TRAPPC8Q9Y2L5 1435 aa23.67■■□□□ 1.38
HTT-207ENST00000509751 ZNF644Q9H582 1327 aaPredicted RBP23.66■■□□□ 1.38
HTT-207ENST00000509751 ZMYM4Q5VZL5 1548 aa23.66■■□□□ 1.38
HTT-207ENST00000509751 SYCP2Q9BX26 1530 aa23.66■■□□□ 1.38
HTT-207ENST00000509751 ZNF518AQ6AHZ1 1483 aa23.65■■□□□ 1.38
HTT-207ENST00000509751 MYT1LQ9UL68 1186 aa23.65■■□□□ 1.38
HTT-207ENST00000509751 YEATS2Q9ULM3 1422 aa23.65■■□□□ 1.38
HTT-207ENST00000509751 HNRNPMP52272 730 aaKnown RBP eCLIP23.64■■□□□ 1.37
HTT-207ENST00000509751 ZFYVE16Q7Z3T8 1539 aa23.64■■□□□ 1.37
HTT-207ENST00000509751 ARHGEF40Q8TER5 1519 aa23.64■■□□□ 1.37
HTT-207ENST00000509751 PLEKHH2Q8IVE3 1493 aa23.6■■□□□ 1.37
HTT-207ENST00000509751 KDM5CP41229 1560 aa23.6■■□□□ 1.37
HTT-207ENST00000509751 MAGI2Q86UL8 1455 aa23.59■■□□□ 1.37
HTT-207ENST00000509751 KDM4FA0A1W2PPD8 638 aa23.58■■□□□ 1.37
HTT-207ENST00000509751 ARID4BQ4LE39 1312 aaPredicted RBP23.58■■□□□ 1.36
HTT-207ENST00000509751 CAMSAP2Q08AD1 1489 aa23.57■■□□□ 1.36
HTT-207ENST00000509751 MYOM3Q5VTT5 1437 aa23.57■■□□□ 1.36
HTT-207ENST00000509751 KIAA1107Q9UPP5 1409 aa23.57■■□□□ 1.36
HTT-207ENST00000509751 HECW2Q9P2P5 1572 aa23.57■■□□□ 1.36
HTT-207ENST00000509751 PPARGC1BQ86YN6 1023 aaKnown RBP23.54■■□□□ 1.36
HTT-207ENST00000509751 SPAG9O60271 1321 aaKnown RBP23.52■■□□□ 1.36
HTT-207ENST00000509751 MBD5Q9P267 1494 aa23.51■■□□□ 1.35
HTT-207ENST00000509751 MLH3Q9UHC1 1453 aa23.51■■□□□ 1.35
HTT-207ENST00000509751 ATP10AO60312 1499 aa23.5■■□□□ 1.35
HTT-207ENST00000509751 DIP2CQ9Y2E4 1556 aa23.49■■□□□ 1.35
HTT-207ENST00000509751 ABCA6Q8N139 1617 aa23.49■■□□□ 1.35
HTT-207ENST00000509751 C9orf84Q5VXU9 1444 aa23.49■■□□□ 1.35
HTT-207ENST00000509751 MIA2Q96PC5 1412 aa23.48■■□□□ 1.35
HTT-207ENST00000509751 SIGLEC1Q9BZZ2 1709 aa23.47■■□□□ 1.35
HTT-207ENST00000509751 KIDINS220Q9ULH0 1771 aa23.47■■□□□ 1.35
HTT-207ENST00000509751 MLECQ14165 292 aa23.46■■□□□ 1.35
HTT-207ENST00000509751 ATP7AQ04656 1500 aa23.45■■□□□ 1.34
HTT-207ENST00000509751 CCDC141Q6ZP82 1450 aa23.45■■□□□ 1.34
HTT-207ENST00000509751 FGD6Q6ZV73 1430 aa23.44■■□□□ 1.34
HTT-207ENST00000509751 INO80Q9ULG1 1556 aaPredicted RBP23.44■■□□□ 1.34
HTT-207ENST00000509751 PTPN23Q9H3S7 1636 aa23.42■■□□□ 1.34
HTT-207ENST00000509751 BCORL1Q5H9F3 1711 aa23.41■■□□□ 1.34
HTT-207ENST00000509751 ARHGEF5Q12774 1597 aa23.4■■□□□ 1.34
HTT-207ENST00000509751 RSPH4AQ5TD94 716 aa23.38■■□□□ 1.33
HTT-207ENST00000509751 ADAMTSL3P82987 1691 aa23.36■■□□□ 1.33
HTT-207ENST00000509751 TSPY4P0CV99 314 aa23.36■■□□□ 1.33
HTT-207ENST00000509751 TSPY10P0CW01 314 aa23.36■■□□□ 1.33
HTT-207ENST00000509751 MADDQ8WXG6 1647 aa23.36■■□□□ 1.33
HTT-207ENST00000509751 REREQ9P2R6 1566 aa23.35■■□□□ 1.33
HTT-207ENST00000509751 FAM50AQ14320 339 aaKnown RBP23.35■■□□□ 1.33
HTT-207ENST00000509751 TCOF1Q13428 1488 aaKnown RBP23.35■■□□□ 1.33
HTT-207ENST00000509751 RTEL1-TNFRSF6BF6WH68 1400 aa23.34■■□□□ 1.33
HTT-207ENST00000509751 A2MP01023 1474 aa23.33■■□□□ 1.33
HTT-207ENST00000509751 AGLP35573 1532 aa23.3■■□□□ 1.32
HTT-207ENST00000509751 PLPPR3Q6T4P5 718 aa23.3■■□□□ 1.32
HTT-207ENST00000509751 ABCC5O15440 1437 aa23.3■■□□□ 1.32
HTT-207ENST00000509751 RIMS1Q86UR5 1692 aaKnown RBP23.29■■□□□ 1.32
HTT-207ENST00000509751 DAPK1P53355 1430 aa23.29■■□□□ 1.32
HTT-207ENST00000509751 PTPRMP28827 1452 aa23.28■■□□□ 1.32
HTT-207ENST00000509751 ADGBQ8N7X0 1667 aa23.28■■□□□ 1.32
HTT-207ENST00000509751 PLXNC1O60486 1568 aa23.27■■□□□ 1.32
HTT-207ENST00000509751 MAST1Q9Y2H9 1570 aa23.27■■□□□ 1.32
HTT-207ENST00000509751 DNMT1P26358 1616 aaKnown RBP23.26■■□□□ 1.31
HTT-207ENST00000509751 CROCC2H7BZ55 1655 aa23.25■■□□□ 1.31
HTT-207ENST00000509751 FER1L4A9Z1Z3 1794 aa23.25■■□□□ 1.31
HTT-207ENST00000509751 CHIC2Q9UKJ5 165 aa23.25■■□□□ 1.31
HTT-207ENST00000509751 DHX29Q7Z478 1369 aaKnown RBP23.25■■□□□ 1.31
HTT-207ENST00000509751 SHANK2Q9UPX8 1470 aa23.24■■□□□ 1.31
HTT-207ENST00000509751 GGT6Q6P531 493 aa23.22■■□□□ 1.31
HTT-207ENST00000509751 KIF3BO15066 747 aa23.2■■□□□ 1.3
HTT-207ENST00000509751 ESF1Q9H501 851 aaKnown RBP23.2■■□□□ 1.3
HTT-207ENST00000509751 RRP7BPQ9NSQ0 103 aa23.19■■□□□ 1.3
HTT-207ENST00000509751 KIF15Q9NS87 1388 aa23.18■■□□□ 1.3
HTT-207ENST00000509751 ITGAEP38570 1179 aa23.18■■□□□ 1.3
HTT-207ENST00000509751 CEBPAP49715 358 aaPredicted RBP23.16■■□□□ 1.3
HTT-207ENST00000509751 ANKRD30AQ9BXX3 1397 aa23.14■■□□□ 1.3
HTT-207ENST00000509751 PTPRKQ15262 1439 aa23.13■■□□□ 1.29
HTT-207ENST00000509751 DUOX2Q9NRD8 1548 aa23.13■■□□□ 1.29
HTT-207ENST00000509751 NCOA1Q15788 1441 aa23.1■■□□□ 1.29
HTT-207ENST00000509751 RRBP1Q9P2E9 1410 aaKnown RBP23.1■■□□□ 1.29
HTT-207ENST00000509751 CNTLNQ9NXG0 1405 aa23.09■■□□□ 1.29
HTT-207ENST00000509751 CLTCQ00610 1675 aaKnown RBP23.09■■□□□ 1.29
HTT-207ENST00000509751 ADGRL2O95490 1459 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms