RNA–Protein interactions for RNA: ENST00000509662.5

ATP2C1-217, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 559 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-217ENST00000509662 POGZQ7Z3K3 1410 aa37.78■■■■□ 3.64
ATP2C1-217ENST00000509662 ARID4BQ4LE39 1312 aaPredicted RBP37.77■■■■□ 3.64
ATP2C1-217ENST00000509662 MAGI2Q86UL8 1455 aa37.77■■■■□ 3.64
ATP2C1-217ENST00000509662 ZMYM4Q5VZL5 1548 aa37.77■■■■□ 3.64
ATP2C1-217ENST00000509662 MTUS2Q5JR59 1369 aa37.75■■■■□ 3.63
ATP2C1-217ENST00000509662 CDC42BPBQ9Y5S2 1711 aa37.73■■■■□ 3.63
ATP2C1-217ENST00000509662 VPS8Q8N3P4 1428 aa37.73■■■■□ 3.63
ATP2C1-217ENST00000509662 ARHGEF40Q8TER5 1519 aa37.72■■■■□ 3.63
ATP2C1-217ENST00000509662 PREX2Q70Z35 1606 aa37.71■■■■□ 3.63
ATP2C1-217ENST00000509662 ZFYVE16Q7Z3T8 1539 aa37.7■■■■□ 3.63
ATP2C1-217ENST00000509662 ZNF518AQ6AHZ1 1483 aa37.67■■■■□ 3.62
ATP2C1-217ENST00000509662 YEATS2Q9ULM3 1422 aa37.65■■■■□ 3.62
ATP2C1-217ENST00000509662 AFAP1Q8N556 730 aa37.65■■■■□ 3.62
ATP2C1-217ENST00000509662 CDC42BPAQ5VT25 1732 aa37.64■■■■□ 3.62
ATP2C1-217ENST00000509662 MYT1LQ9UL68 1186 aa37.62■■■■□ 3.61
ATP2C1-217ENST00000509662 CCNB3Q8WWL7 1395 aa37.61■■■■□ 3.61
ATP2C1-217ENST00000509662 ZNF777Q9ULD5 760 aaPredicted RBP37.61■■■■□ 3.61
ATP2C1-217ENST00000509662 GPATCH8Q9UKJ3 1502 aaKnown RBP37.61■■■■□ 3.61
ATP2C1-217ENST00000509662 CFDP1Q9UEE9 299 aaPredicted RBP37.57■■■■□ 3.6
ATP2C1-217ENST00000509662 ADAMTSL3P82987 1691 aa37.56■■■■□ 3.6
ATP2C1-217ENST00000509662 BCORL1Q5H9F3 1711 aa37.56■■■■□ 3.6
ATP2C1-217ENST00000509662 ATP10AO60312 1499 aa37.56■■■■□ 3.6
ATP2C1-217ENST00000509662 EHBP1L1Q8N3D4 1523 aa37.56■■■■□ 3.6
ATP2C1-217ENST00000509662 ABCC1P33527 1531 aa37.55■■■■□ 3.6
ATP2C1-217ENST00000509662 KDM5CP41229 1560 aa37.54■■■■□ 3.6
ATP2C1-217ENST00000509662 ARHGEF12Q9NZN5 1544 aa37.51■■■■□ 3.59
ATP2C1-217ENST00000509662 TRAPPC8Q9Y2L5 1435 aa37.5■■■■□ 3.59
ATP2C1-217ENST00000509662 ITSN2Q9NZM3 1697 aa37.48■■■■□ 3.59
ATP2C1-217ENST00000509662 C9orf84Q5VXU9 1444 aa37.48■■■■□ 3.59
ATP2C1-217ENST00000509662 MLH3Q9UHC1 1453 aa37.47■■■■□ 3.59
ATP2C1-217ENST00000509662 TIAM1Q13009 1591 aa37.46■■■■□ 3.59
ATP2C1-217ENST00000509662 HECW2Q9P2P5 1572 aa37.46■■■■□ 3.59
ATP2C1-217ENST00000509662 PTPRMP28827 1452 aa37.45■■■■□ 3.59
ATP2C1-217ENST00000509662 SAMD9LQ8IVG5 1584 aa37.45■■■■□ 3.59
ATP2C1-217ENST00000509662 PLEKHH2Q8IVE3 1493 aa37.45■■■■□ 3.59
ATP2C1-217ENST00000509662 HNRNPMP52272 730 aaKnown RBP eCLIP37.44■■■■□ 3.582e-6■■■■□ 22.4
ATP2C1-217ENST00000509662 MLECQ14165 292 aa37.42■■■■□ 3.58
ATP2C1-217ENST00000509662 MADDQ8WXG6 1647 aa37.42■■■■□ 3.58
ATP2C1-217ENST00000509662 KIAA1107Q9UPP5 1409 aa37.42■■■■□ 3.58
ATP2C1-217ENST00000509662 MAP3K1Q13233 1512 aa37.39■■■■□ 3.58
ATP2C1-217ENST00000509662 SYCP2Q9BX26 1530 aa37.38■■■■□ 3.57
ATP2C1-217ENST00000509662 SIGLEC1Q9BZZ2 1709 aa37.38■■■■□ 3.57
ATP2C1-217ENST00000509662 SUPT6HQ7KZ85 1726 aaKnown RBP37.37■■■■□ 3.57
ATP2C1-217ENST00000509662 SPAG9O60271 1321 aaKnown RBP37.36■■■■□ 3.57
ATP2C1-217ENST00000509662 DIP2CQ9Y2E4 1556 aa37.34■■■■□ 3.57
ATP2C1-217ENST00000509662 NCOA2Q15596 1464 aa37.34■■■■□ 3.57
ATP2C1-217ENST00000509662 LRRC9Q6ZRR7 1453 aa37.32■■■■□ 3.56
ATP2C1-217ENST00000509662 RIMS1Q86UR5 1692 aaKnown RBP37.31■■■■□ 3.56
ATP2C1-217ENST00000509662 APLP2Q06481 763 aa37.3■■■■□ 3.56
ATP2C1-217ENST00000509662 ZNF644Q9H582 1327 aaPredicted RBP37.3■■■■□ 3.56
ATP2C1-217ENST00000509662 REREQ9P2R6 1566 aa37.29■■■■□ 3.56
ATP2C1-217ENST00000509662 ABCA6Q8N139 1617 aa37.29■■■■□ 3.56
ATP2C1-217ENST00000509662 KIDINS220Q9ULH0 1771 aa37.28■■■■□ 3.56
ATP2C1-217ENST00000509662 KANK4Q5T7N3 995 aaPredicted RBP37.22■■■■□ 3.55
ATP2C1-217ENST00000509662 FER1L4A9Z1Z3 1794 aa37.22■■■■□ 3.55
ATP2C1-217ENST00000509662 PLPPR3Q6T4P5 718 aa37.21■■■■□ 3.55
ATP2C1-217ENST00000509662 AGLP35573 1532 aa37.2■■■■□ 3.55
ATP2C1-217ENST00000509662 RSPH4AQ5TD94 716 aa37.18■■■■□ 3.54
ATP2C1-217ENST00000509662 ATP7AQ04656 1500 aa37.18■■■■□ 3.54
ATP2C1-217ENST00000509662 MBD5Q9P267 1494 aa37.17■■■■□ 3.54
ATP2C1-217ENST00000509662 ESF1Q9H501 851 aaKnown RBP37.16■■■■□ 3.54
ATP2C1-217ENST00000509662 CAMSAP2Q08AD1 1489 aa37.12■■■■□ 3.53
ATP2C1-217ENST00000509662 INO80Q9ULG1 1556 aaPredicted RBP37.12■■■■□ 3.53
ATP2C1-217ENST00000509662 RTEL1-TNFRSF6BF6WH68 1400 aa37.08■■■■□ 3.53
ATP2C1-217ENST00000509662 A2MP01023 1474 aa37.06■■■■□ 3.52
ATP2C1-217ENST00000509662 CCDC141Q6ZP82 1450 aa37.06■■■■□ 3.52
ATP2C1-217ENST00000509662 TSPY4P0CV99 314 aa37.03■■■■□ 3.52
ATP2C1-217ENST00000509662 TSPY10P0CW01 314 aa37.03■■■■□ 3.52
ATP2C1-217ENST00000509662 MYOM3Q5VTT5 1437 aa37.02■■■■□ 3.52
ATP2C1-217ENST00000509662 CEBPAP49715 358 aaPredicted RBP37.02■■■■□ 3.52
ATP2C1-217ENST00000509662 MIA2Q96PC5 1412 aa37.02■■■■□ 3.52
ATP2C1-217ENST00000509662 ADGBQ8N7X0 1667 aa36.99■■■■□ 3.51
ATP2C1-217ENST00000509662 ARHGEF5Q12774 1597 aa36.97■■■■□ 3.51
ATP2C1-217ENST00000509662 LMTK3Q96Q04 1460 aa36.97■■■■□ 3.51
ATP2C1-217ENST00000509662 CNTLNQ9NXG0 1405 aa36.97■■■■□ 3.51
ATP2C1-217ENST00000509662 PLXNC1O60486 1568 aa36.96■■■■□ 3.51
ATP2C1-217ENST00000509662 DHX29Q7Z478 1369 aaKnown RBP36.92■■■■□ 3.5
ATP2C1-217ENST00000509662 GGT6Q6P531 493 aa36.92■■■■□ 3.5
ATP2C1-217ENST00000509662 PPP6R1Q9UPN7 881 aa36.9■■■■□ 3.5
ATP2C1-217ENST00000509662 SETD1BQ9UPS6 1966 aaKnown RBP36.86■■■■□ 3.49
ATP2C1-217ENST00000509662 HSPA2P54652 639 aa36.85■■■■□ 3.49
ATP2C1-217ENST00000509662 C3P01024 1663 aa36.85■■■■□ 3.49
ATP2C1-217ENST00000509662 PREX1Q8TCU6 1659 aa36.82■■■■□ 3.48
ATP2C1-217ENST00000509662 ZMYM3Q14202 1370 aa36.81■■■■□ 3.48
ATP2C1-217ENST00000509662 KIF3BO15066 747 aa36.81■■■■□ 3.48
ATP2C1-217ENST00000509662 MROH2AA6NES4 1674 aa36.79■■■■□ 3.48
ATP2C1-217ENST00000509662 UHRF1BP1Q6BDS2 1440 aa36.78■■■■□ 3.48
ATP2C1-217ENST00000509662 MAST1Q9Y2H9 1570 aa36.77■■■■□ 3.48
ATP2C1-217ENST00000509662 PTPN23Q9H3S7 1636 aa36.75■■■■□ 3.47
ATP2C1-217ENST00000509662 FGD6Q6ZV73 1430 aa36.75■■■■□ 3.47
ATP2C1-217ENST00000509662 CLTCQ00610 1675 aaKnown RBP36.74■■■■□ 3.47
ATP2C1-217ENST00000509662 NPATQ14207 1427 aa36.7■■■■□ 3.47
ATP2C1-217ENST00000509662 TCOF1Q13428 1488 aaKnown RBP36.67■■■■□ 3.46
ATP2C1-217ENST00000509662 ABCC5O15440 1437 aa36.65■■■■□ 3.46
ATP2C1-217ENST00000509662 WASHC2CQ9Y4E1 1318 aa36.64■■■■□ 3.46
ATP2C1-217ENST00000509662 SHANK2Q9UPX8 1470 aa36.62■■■■□ 3.45
ATP2C1-217ENST00000509662 FAM135AQ9P2D6 1515 aa36.61■■■■□ 3.45
ATP2C1-217ENST00000509662 DAPK1P53355 1430 aa36.6■■■■□ 3.45
ATP2C1-217ENST00000509662 PTPRKQ15262 1439 aa36.59■■■■□ 3.45
ATP2C1-217ENST00000509662 PPARGC1BQ86YN6 1023 aaKnown RBP36.58■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms