RNA–Protein interactions for RNA: ENST00000509553.1

SH3TC1-218, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-218ENST00000509553 KDM6BO15054 1643 aa23.84■■□□□ 1.41
SH3TC1-218ENST00000509553 ARAP3Q8WWN8 1544 aa23.83■■□□□ 1.41
SH3TC1-218ENST00000509553 MYOM3Q5VTT5 1437 aa23.82■■□□□ 1.4
SH3TC1-218ENST00000509553 SAMD9LQ8IVG5 1584 aa23.81■■□□□ 1.4
SH3TC1-218ENST00000509553 CFAP74Q9C0B2 1584 aa23.81■■□□□ 1.4
SH3TC1-218ENST00000509553 FANCAO15360 1455 aa23.8■■□□□ 1.4
SH3TC1-218ENST00000509553 COL17A1Q9UMD9 1497 aaPredicted RBP23.79■■□□□ 1.4
SH3TC1-218ENST00000509553 PTPN23Q9H3S7 1636 aa23.77■■□□□ 1.4
SH3TC1-218ENST00000509553 TEX14Q8IWB6 1497 aa23.76■■□□□ 1.39
SH3TC1-218ENST00000509553 CFDP1Q9UEE9 299 aaPredicted RBP23.76■■□□□ 1.39
SH3TC1-218ENST00000509553 ZNF777Q9ULD5 760 aaPredicted RBP23.75■■□□□ 1.39
SH3TC1-218ENST00000509553 FGD6Q6ZV73 1430 aa23.75■■□□□ 1.39
SH3TC1-218ENST00000509553 EFCAB2Q5VUJ9 269 aa23.73■■□□□ 1.39
SH3TC1-218ENST00000509553 ZNF644Q9H582 1327 aaPredicted RBP23.73■■□□□ 1.39
SH3TC1-218ENST00000509553 NEO1Q92859 1461 aa23.73■■□□□ 1.39
SH3TC1-218ENST00000509553 AKNAQ7Z591 1439 aa23.72■■□□□ 1.39
SH3TC1-218ENST00000509553 CAMSAP2Q08AD1 1489 aa23.72■■□□□ 1.39
SH3TC1-218ENST00000509553 ABCC1P33527 1531 aa23.72■■□□□ 1.39
SH3TC1-218ENST00000509553 MIA2Q96PC5 1412 aa23.71■■□□□ 1.39
SH3TC1-218ENST00000509553 SYCP2Q9BX26 1530 aa23.69■■□□□ 1.38
SH3TC1-218ENST00000509553 ARHGEF12Q9NZN5 1544 aa23.69■■□□□ 1.38
SH3TC1-218ENST00000509553 ADGRL1O94910 1474 aa23.68■■□□□ 1.38
SH3TC1-218ENST00000509553 RICTORQ6R327 1708 aa23.67■■□□□ 1.38
SH3TC1-218ENST00000509553 TCOF1Q13428 1488 aaKnown RBP23.67■■□□□ 1.38
SH3TC1-218ENST00000509553 SCAPERQ9BY12 1400 aa23.64■■□□□ 1.37
SH3TC1-218ENST00000509553 FRMPD1Q5SYB0 1578 aa23.64■■□□□ 1.37
SH3TC1-218ENST00000509553 RRBP1Q9P2E9 1410 aaKnown RBP23.63■■□□□ 1.37
SH3TC1-218ENST00000509553 PLEKHH2Q8IVE3 1493 aa23.62■■□□□ 1.37
SH3TC1-218ENST00000509553 HNRNPMP52272 730 aaKnown RBP eCLIP23.61■■□□□ 1.37
SH3TC1-218ENST00000509553 CROCC2H7BZ55 1655 aa23.6■■□□□ 1.37
SH3TC1-218ENST00000509553 TRAPPC8Q9Y2L5 1435 aa23.6■■□□□ 1.37
SH3TC1-218ENST00000509553 FAM50AQ14320 339 aaKnown RBP23.6■■□□□ 1.37
SH3TC1-218ENST00000509553 MBD5Q9P267 1494 aa23.6■■□□□ 1.37
SH3TC1-218ENST00000509553 DNMT1P26358 1616 aaKnown RBP23.59■■□□□ 1.37
SH3TC1-218ENST00000509553 ARHGEF5Q12774 1597 aa23.59■■□□□ 1.37
SH3TC1-218ENST00000509553 KIAA1107Q9UPP5 1409 aa23.59■■□□□ 1.37
SH3TC1-218ENST00000509553 DENND4BO75064 1496 aaPredicted RBP23.58■■□□□ 1.37
SH3TC1-218ENST00000509553 POGZQ7Z3K3 1410 aa23.57■■□□□ 1.36
SH3TC1-218ENST00000509553 RAPGEF3O95398 923 aa23.56■■□□□ 1.36
SH3TC1-218ENST00000509553 KDM5CP41229 1560 aa23.53■■□□□ 1.36
SH3TC1-218ENST00000509553 AFAP1Q8N556 730 aa23.53■■□□□ 1.36
SH3TC1-218ENST00000509553 CCDC141Q6ZP82 1450 aa23.53■■□□□ 1.36
SH3TC1-218ENST00000509553 ZNF518AQ6AHZ1 1483 aa23.52■■□□□ 1.36
SH3TC1-218ENST00000509553 ABCC5O15440 1437 aa23.51■■□□□ 1.35
SH3TC1-218ENST00000509553 DAPK1P53355 1430 aa23.51■■□□□ 1.35
SH3TC1-218ENST00000509553 KIDINS220Q9ULH0 1771 aa23.5■■□□□ 1.35
SH3TC1-218ENST00000509553 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.5■■□□□ 1.35
SH3TC1-218ENST00000509553 ZMYM4Q5VZL5 1548 aa23.49■■□□□ 1.35
SH3TC1-218ENST00000509553 HECW2Q9P2P5 1572 aa23.49■■□□□ 1.35
SH3TC1-218ENST00000509553 INO80Q9ULG1 1556 aaPredicted RBP23.49■■□□□ 1.35
SH3TC1-218ENST00000509553 ADGBQ8N7X0 1667 aa23.48■■□□□ 1.35
SH3TC1-218ENST00000509553 KDM4FA0A1W2PPD8 638 aa23.48■■□□□ 1.35
SH3TC1-218ENST00000509553 ITGAEP38570 1179 aa23.48■■□□□ 1.35
SH3TC1-218ENST00000509553 PTPRKQ15262 1439 aa23.47■■□□□ 1.35
SH3TC1-218ENST00000509553 ZFYVE16Q7Z3T8 1539 aa23.46■■□□□ 1.35
SH3TC1-218ENST00000509553 MAST1Q9Y2H9 1570 aa23.46■■□□□ 1.35
SH3TC1-218ENST00000509553 ATP7AQ04656 1500 aa23.44■■□□□ 1.34
SH3TC1-218ENST00000509553 ABCA6Q8N139 1617 aa23.44■■□□□ 1.34
SH3TC1-218ENST00000509553 SHANK2Q9UPX8 1470 aa23.43■■□□□ 1.34
SH3TC1-218ENST00000509553 C9orf84Q5VXU9 1444 aa23.42■■□□□ 1.34
SH3TC1-218ENST00000509553 SPAG9O60271 1321 aaKnown RBP23.41■■□□□ 1.34
SH3TC1-218ENST00000509553 RSPH4AQ5TD94 716 aa23.41■■□□□ 1.34
SH3TC1-218ENST00000509553 MLH3Q9UHC1 1453 aa23.41■■□□□ 1.34
SH3TC1-218ENST00000509553 YEATS2Q9ULM3 1422 aa23.41■■□□□ 1.34
SH3TC1-218ENST00000509553 CHIC2Q9UKJ5 165 aa23.4■■□□□ 1.34
SH3TC1-218ENST00000509553 DIP2CQ9Y2E4 1556 aa23.4■■□□□ 1.34
SH3TC1-218ENST00000509553 ARHGEF40Q8TER5 1519 aa23.38■■□□□ 1.33
SH3TC1-218ENST00000509553 TSPY4P0CV99 314 aa23.38■■□□□ 1.33
SH3TC1-218ENST00000509553 TSPY10P0CW01 314 aa23.38■■□□□ 1.33
SH3TC1-218ENST00000509553 AEBP2Q6ZN18 517 aaPredicted RBP23.38■■□□□ 1.33
SH3TC1-218ENST00000509553 MYT1LQ9UL68 1186 aa23.38■■□□□ 1.33
SH3TC1-218ENST00000509553 PLXNC1O60486 1568 aa23.38■■□□□ 1.33
SH3TC1-218ENST00000509553 SIGLEC1Q9BZZ2 1709 aa23.37■■□□□ 1.33
SH3TC1-218ENST00000509553 MAGI2Q86UL8 1455 aa23.36■■□□□ 1.33
SH3TC1-218ENST00000509553 RTEL1-TNFRSF6BF6WH68 1400 aa23.35■■□□□ 1.33
SH3TC1-218ENST00000509553 ADGRL2O95490 1459 aa23.34■■□□□ 1.33
SH3TC1-218ENST00000509553 TRIM26Q12899 539 aaPredicted RBP23.32■■□□□ 1.32
SH3TC1-218ENST00000509553 GCC2Q8IWJ2 1684 aa23.31■■□□□ 1.32
SH3TC1-218ENST00000509553 NCOA1Q15788 1441 aa23.3■■□□□ 1.32
SH3TC1-218ENST00000509553 RRP7BPQ9NSQ0 103 aa23.29■■□□□ 1.32
SH3TC1-218ENST00000509553 ANKRD30AQ9BXX3 1397 aa23.27■■□□□ 1.32
SH3TC1-218ENST00000509553 ATP10AO60312 1499 aa23.27■■□□□ 1.32
SH3TC1-218ENST00000509553 ROCK1Q13464 1354 aa23.27■■□□□ 1.31
SH3TC1-218ENST00000509553 KIF15Q9NS87 1388 aa23.27■■□□□ 1.31
SH3TC1-218ENST00000509553 A2MP01023 1474 aa23.25■■□□□ 1.31
SH3TC1-218ENST00000509553 DUOX2Q9NRD8 1548 aa23.24■■□□□ 1.31
SH3TC1-218ENST00000509553 REREQ9P2R6 1566 aa23.24■■□□□ 1.31
SH3TC1-218ENST00000509553 NAIPQ13075 1403 aa23.21■■□□□ 1.31
SH3TC1-218ENST00000509553 EIF2AK4Q9P2K8 1649 aaKnown RBP23.19■■□□□ 1.3
SH3TC1-218ENST00000509553 DHX29Q7Z478 1369 aaKnown RBP23.19■■□□□ 1.3
SH3TC1-218ENST00000509553 BCORL1Q5H9F3 1711 aa23.19■■□□□ 1.3
SH3TC1-218ENST00000509553 HFM1A2PYH4 1435 aa23.18■■□□□ 1.3
SH3TC1-218ENST00000509553 ADAMTSL3P82987 1691 aa23.16■■□□□ 1.3
SH3TC1-218ENST00000509553 ANKRD50Q9ULJ7 1429 aa23.16■■□□□ 1.3
SH3TC1-218ENST00000509553 PCGF6Q9BYE7 350 aa23.15■■□□□ 1.3
SH3TC1-218ENST00000509553 ERBINQ96RT1 1412 aa23.15■■□□□ 1.3
SH3TC1-218ENST00000509553 AGLP35573 1532 aa23.14■■□□□ 1.3
SH3TC1-218ENST00000509553 DEPDC5O75140 1603 aa23.12■■□□□ 1.29
SH3TC1-218ENST00000509553 RNF17Q9BXT8 1623 aaKnown RBP23.12■■□□□ 1.29
SH3TC1-218ENST00000509553 MROH1Q8NDA8 1641 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms