RNA–Protein interactions for RNA: ENST00000509507.5

CALCOCO2-215, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2 BASIC

Gene CALCOCO2, Length 1,512 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-215ENST00000509507 TTC37Q6PGP7 1564 aa12.97□□□□□ -0.33
CALCOCO2-215ENST00000509507 MAGI3Q5TCQ9 1506 aa12.95□□□□□ -0.34
CALCOCO2-215ENST00000509507 CCDC18Q5T9S5 1454 aa12.95□□□□□ -0.34
CALCOCO2-215ENST00000509507 KIF14Q15058 1648 aa12.94□□□□□ -0.34
CALCOCO2-215ENST00000509507 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.94□□□□□ -0.34
CALCOCO2-215ENST00000509507 PLEKHD1A6NEE1 506 aa12.93□□□□□ -0.34
CALCOCO2-215ENST00000509507 MYT1LQ9UL68 1186 aa12.93□□□□□ -0.34
CALCOCO2-215ENST00000509507 MYO5CQ9NQX4 1742 aa12.92□□□□□ -0.34
CALCOCO2-215ENST00000509507 CFAP74Q9C0B2 1584 aa12.89□□□□□ -0.35
CALCOCO2-215ENST00000509507 TROQ12816 1431 aaPredicted RBP12.89□□□□□ -0.35
CALCOCO2-215ENST00000509507 COL17A1Q9UMD9 1497 aaPredicted RBP12.89□□□□□ -0.35
CALCOCO2-215ENST00000509507 CDK11AQ9UQ88 783 aaPredicted RBP12.88□□□□□ -0.35
CALCOCO2-215ENST00000509507 NEO1Q92859 1461 aa12.86□□□□□ -0.35
CALCOCO2-215ENST00000509507 APLP2Q06481 763 aa12.85□□□□□ -0.35
CALCOCO2-215ENST00000509507 FANCAO15360 1455 aa12.85□□□□□ -0.35
CALCOCO2-215ENST00000509507 PREX2Q70Z35 1606 aa12.84□□□□□ -0.35
CALCOCO2-215ENST00000509507 VPS8Q8N3P4 1428 aa12.84□□□□□ -0.35
CALCOCO2-215ENST00000509507 CDC42BPAQ5VT25 1732 aa12.84□□□□□ -0.35
CALCOCO2-215ENST00000509507 CDC42BPBQ9Y5S2 1711 aa12.84□□□□□ -0.35
CALCOCO2-215ENST00000509507 ARAP3Q8WWN8 1544 aa12.84□□□□□ -0.35
CALCOCO2-215ENST00000509507 FRMPD1Q5SYB0 1578 aa12.83□□□□□ -0.36
CALCOCO2-215ENST00000509507 RICTORQ6R327 1708 aa12.82□□□□□ -0.36
CALCOCO2-215ENST00000509507 ARHGAP5Q13017 1502 aa12.82□□□□□ -0.36
CALCOCO2-215ENST00000509507 EHBP1L1Q8N3D4 1523 aa12.82□□□□□ -0.36
CALCOCO2-215ENST00000509507 PLCH2O75038 1416 aa12.81□□□□□ -0.36
CALCOCO2-215ENST00000509507 TIAM1Q13009 1591 aa12.81□□□□□ -0.36
CALCOCO2-215ENST00000509507 PHLDB1Q86UU1 1377 aa12.81□□□□□ -0.36
CALCOCO2-215ENST00000509507 MTUS2Q5JR59 1369 aa12.8□□□□□ -0.36
CALCOCO2-215ENST00000509507 AKNAQ7Z591 1439 aa12.8□□□□□ -0.36
CALCOCO2-215ENST00000509507 ADGRL1O94910 1474 aa12.78□□□□□ -0.36
CALCOCO2-215ENST00000509507 SUPT6HQ7KZ85 1726 aaKnown RBP12.77□□□□□ -0.36
CALCOCO2-215ENST00000509507 ITSN2Q9NZM3 1697 aa12.77□□□□□ -0.37
CALCOCO2-215ENST00000509507 DENND4BO75064 1496 aaPredicted RBP12.76□□□□□ -0.37
CALCOCO2-215ENST00000509507 RAPGEF3O95398 923 aa12.76□□□□□ -0.37
CALCOCO2-215ENST00000509507 ABCC1P33527 1531 aa12.74□□□□□ -0.37
CALCOCO2-215ENST00000509507 ZMYM4Q5VZL5 1548 aa12.74□□□□□ -0.37
CALCOCO2-215ENST00000509507 ARHGEF40Q8TER5 1519 aa12.74□□□□□ -0.37
CALCOCO2-215ENST00000509507 POGZQ7Z3K3 1410 aa12.74□□□□□ -0.37
CALCOCO2-215ENST00000509507 EFCAB2Q5VUJ9 269 aa12.73□□□□□ -0.37
CALCOCO2-215ENST00000509507 SCAPERQ9BY12 1400 aa12.73□□□□□ -0.37
CALCOCO2-215ENST00000509507 SAMD9LQ8IVG5 1584 aa12.73□□□□□ -0.37
CALCOCO2-215ENST00000509507 GPATCH8Q9UKJ3 1502 aaKnown RBP12.73□□□□□ -0.37
CALCOCO2-215ENST00000509507 LRRC9Q6ZRR7 1453 aa12.73□□□□□ -0.37
CALCOCO2-215ENST00000509507 MAP3K1Q13233 1512 aa12.72□□□□□ -0.37
CALCOCO2-215ENST00000509507 CCNB3Q8WWL7 1395 aa12.71□□□□□ -0.37
CALCOCO2-215ENST00000509507 NCOA2Q15596 1464 aa12.71□□□□□ -0.38
CALCOCO2-215ENST00000509507 ZNF518AQ6AHZ1 1483 aa12.71□□□□□ -0.38
CALCOCO2-215ENST00000509507 KDM5CP41229 1560 aa12.7□□□□□ -0.38
CALCOCO2-215ENST00000509507 FANCIQ9NVI1 1328 aa12.7□□□□□ -0.38
CALCOCO2-215ENST00000509507 ZFYVE16Q7Z3T8 1539 aa12.7□□□□□ -0.38
CALCOCO2-215ENST00000509507 SYCP2Q9BX26 1530 aa12.7□□□□□ -0.38
CALCOCO2-215ENST00000509507 HECW2Q9P2P5 1572 aa12.7□□□□□ -0.38
CALCOCO2-215ENST00000509507 RBM19Q9Y4C8 960 aaKnown RBP12.69□□□□□ -0.38
CALCOCO2-215ENST00000509507 ARHGEF12Q9NZN5 1544 aa12.68□□□□□ -0.38
CALCOCO2-215ENST00000509507 ZNF777Q9ULD5 760 aaPredicted RBP12.67□□□□□ -0.38
CALCOCO2-215ENST00000509507 SIGLEC1Q9BZZ2 1709 aa12.67□□□□□ -0.38
CALCOCO2-215ENST00000509507 YEATS2Q9ULM3 1422 aa12.67□□□□□ -0.38
CALCOCO2-215ENST00000509507 ERICH6BQ5W0A0 696 aa12.67□□□□□ -0.38
CALCOCO2-215ENST00000509507 MAGI2Q86UL8 1455 aa12.66□□□□□ -0.38
CALCOCO2-215ENST00000509507 KANK4Q5T7N3 995 aaPredicted RBP12.66□□□□□ -0.38
CALCOCO2-215ENST00000509507 CFDP1Q9UEE9 299 aaPredicted RBP12.66□□□□□ -0.38
CALCOCO2-215ENST00000509507 TRAPPC8Q9Y2L5 1435 aa12.66□□□□□ -0.38
CALCOCO2-215ENST00000509507 ABCA6Q8N139 1617 aa12.65□□□□□ -0.38
CALCOCO2-215ENST00000509507 KIDINS220Q9ULH0 1771 aa12.64□□□□□ -0.39
CALCOCO2-215ENST00000509507 KDM4FA0A1W2PPD8 638 aa12.64□□□□□ -0.39
CALCOCO2-215ENST00000509507 PLEKHH2Q8IVE3 1493 aa12.64□□□□□ -0.39
CALCOCO2-215ENST00000509507 BCORL1Q5H9F3 1711 aa12.64□□□□□ -0.39
CALCOCO2-215ENST00000509507 DIP2CQ9Y2E4 1556 aa12.64□□□□□ -0.39
CALCOCO2-215ENST00000509507 AFAP1Q8N556 730 aa12.63□□□□□ -0.39
CALCOCO2-215ENST00000509507 CAMSAP2Q08AD1 1489 aa12.63□□□□□ -0.39
CALCOCO2-215ENST00000509507 INO80Q9ULG1 1556 aaPredicted RBP12.62□□□□□ -0.39
CALCOCO2-215ENST00000509507 KIAA1107Q9UPP5 1409 aa12.61□□□□□ -0.39
CALCOCO2-215ENST00000509507 ADAMTSL3P82987 1691 aa12.61□□□□□ -0.39
CALCOCO2-215ENST00000509507 ZNF644Q9H582 1327 aaPredicted RBP12.61□□□□□ -0.39
CALCOCO2-215ENST00000509507 C9orf84Q5VXU9 1444 aa12.6□□□□□ -0.39
CALCOCO2-215ENST00000509507 MLH3Q9UHC1 1453 aa12.6□□□□□ -0.39
CALCOCO2-215ENST00000509507 MADDQ8WXG6 1647 aa12.6□□□□□ -0.39
CALCOCO2-215ENST00000509507 HNRNPMP52272 730 aaKnown RBP eCLIP12.6□□□□□ -0.39
CALCOCO2-215ENST00000509507 ARID4BQ4LE39 1312 aaPredicted RBP12.6□□□□□ -0.39
CALCOCO2-215ENST00000509507 MYOM3Q5VTT5 1437 aa12.6□□□□□ -0.39
CALCOCO2-215ENST00000509507 ATP7AQ04656 1500 aa12.6□□□□□ -0.39
CALCOCO2-215ENST00000509507 NEFLP07196 543 aa12.59□□□□□ -0.39
CALCOCO2-215ENST00000509507 ATP10AO60312 1499 aa12.59□□□□□ -0.39
CALCOCO2-215ENST00000509507 REREQ9P2R6 1566 aa12.58□□□□□ -0.4
CALCOCO2-215ENST00000509507 FER1L4A9Z1Z3 1794 aa12.58□□□□□ -0.4
CALCOCO2-215ENST00000509507 RIMS1Q86UR5 1692 aaKnown RBP12.58□□□□□ -0.4
CALCOCO2-215ENST00000509507 MBD5Q9P267 1494 aa12.58□□□□□ -0.4
CALCOCO2-215ENST00000509507 PTPN23Q9H3S7 1636 aa12.57□□□□□ -0.4
CALCOCO2-215ENST00000509507 ARHGEF5Q12774 1597 aa12.57□□□□□ -0.4
CALCOCO2-215ENST00000509507 CCDC141Q6ZP82 1450 aa12.57□□□□□ -0.4
CALCOCO2-215ENST00000509507 ADGBQ8N7X0 1667 aa12.56□□□□□ -0.4
CALCOCO2-215ENST00000509507 MIA2Q96PC5 1412 aa12.55□□□□□ -0.4
CALCOCO2-215ENST00000509507 SPAG9O60271 1321 aaKnown RBP12.55□□□□□ -0.4
CALCOCO2-215ENST00000509507 CROCC2H7BZ55 1655 aa12.55□□□□□ -0.4
CALCOCO2-215ENST00000509507 MSH5O43196 834 aa12.54□□□□□ -0.4
CALCOCO2-215ENST00000509507 PLXNC1O60486 1568 aa12.53□□□□□ -0.4
CALCOCO2-215ENST00000509507 FKBP8Q14318 412 aa12.53□□□□□ -0.4
CALCOCO2-215ENST00000509507 FGD6Q6ZV73 1430 aa12.52□□□□□ -0.4
CALCOCO2-215ENST00000509507 MLECQ14165 292 aa12.52□□□□□ -0.41
CALCOCO2-215ENST00000509507 DHX57Q6P158 1386 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms