RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 SUPT6HQ7KZ85 1726 aaKnown RBP31.77■■■□□ 2.68
HOXC6-204ENST00000509328 LRRC9Q6ZRR7 1453 aa31.76■■■□□ 2.67
HOXC6-204ENST00000509328 APLP2Q06481 763 aa31.74■■■□□ 2.67
HOXC6-204ENST00000509328 GPATCH8Q9UKJ3 1502 aaKnown RBP31.71■■■□□ 2.67
HOXC6-204ENST00000509328 CCNB3Q8WWL7 1395 aa31.7■■■□□ 2.67
HOXC6-204ENST00000509328 ADGRL1O94910 1474 aa31.7■■■□□ 2.66
HOXC6-204ENST00000509328 ITSN2Q9NZM3 1697 aa31.68■■■□□ 2.66
HOXC6-204ENST00000509328 DENND4BO75064 1496 aaPredicted RBP31.68■■■□□ 2.66
HOXC6-204ENST00000509328 RICTORQ6R327 1708 aa31.68■■■□□ 2.66
HOXC6-204ENST00000509328 NCOA2Q15596 1464 aa31.67■■■□□ 2.66
HOXC6-204ENST00000509328 FRMPD1Q5SYB0 1578 aa31.66■■■□□ 2.66
HOXC6-204ENST00000509328 KANK4Q5T7N3 995 aaPredicted RBP31.66■■■□□ 2.66
HOXC6-204ENST00000509328 RAPGEF3O95398 923 aa31.65■■■□□ 2.66
HOXC6-204ENST00000509328 SCAPERQ9BY12 1400 aa31.64■■■□□ 2.66
HOXC6-204ENST00000509328 CFDP1Q9UEE9 299 aaPredicted RBP31.59■■■□□ 2.65
HOXC6-204ENST00000509328 ABCC1P33527 1531 aa31.59■■■□□ 2.65
HOXC6-204ENST00000509328 SAMD9LQ8IVG5 1584 aa31.58■■■□□ 2.65
HOXC6-204ENST00000509328 POGZQ7Z3K3 1410 aa31.58■■■□□ 2.65
HOXC6-204ENST00000509328 ZNF777Q9ULD5 760 aaPredicted RBP31.55■■■□□ 2.64
HOXC6-204ENST00000509328 ZMYM4Q5VZL5 1548 aa31.54■■■□□ 2.64
HOXC6-204ENST00000509328 ZNF518AQ6AHZ1 1483 aa31.52■■■□□ 2.64
HOXC6-204ENST00000509328 PLEKHH2Q8IVE3 1493 aa31.51■■■□□ 2.63
HOXC6-204ENST00000509328 ARHGEF12Q9NZN5 1544 aa31.5■■■□□ 2.63
HOXC6-204ENST00000509328 KDM5CP41229 1560 aa31.47■■■□□ 2.63
HOXC6-204ENST00000509328 SYCP2Q9BX26 1530 aa31.47■■■□□ 2.63
HOXC6-204ENST00000509328 KIAA1107Q9UPP5 1409 aa31.47■■■□□ 2.63
HOXC6-204ENST00000509328 MAGI2Q86UL8 1455 aa31.46■■■□□ 2.63
HOXC6-204ENST00000509328 ARHGEF40Q8TER5 1519 aa31.44■■■□□ 2.62
HOXC6-204ENST00000509328 TRAPPC8Q9Y2L5 1435 aa31.44■■■□□ 2.62
HOXC6-204ENST00000509328 MYOM3Q5VTT5 1437 aa31.43■■■□□ 2.62
HOXC6-204ENST00000509328 AFAP1Q8N556 730 aa31.43■■■□□ 2.62
HOXC6-204ENST00000509328 ZFYVE16Q7Z3T8 1539 aa31.43■■■□□ 2.62
HOXC6-204ENST00000509328 ZNF644Q9H582 1327 aaPredicted RBP31.41■■■□□ 2.62
HOXC6-204ENST00000509328 HECW2Q9P2P5 1572 aa31.4■■■□□ 2.62
HOXC6-204ENST00000509328 HNRNPMP52272 730 aaKnown RBP eCLIP31.4■■■□□ 2.62
HOXC6-204ENST00000509328 CAMSAP2Q08AD1 1489 aa31.4■■■□□ 2.62
HOXC6-204ENST00000509328 MIA2Q96PC5 1412 aa31.39■■■□□ 2.62
HOXC6-204ENST00000509328 MLH3Q9UHC1 1453 aa31.36■■■□□ 2.61
HOXC6-204ENST00000509328 YEATS2Q9ULM3 1422 aa31.36■■■□□ 2.61
HOXC6-204ENST00000509328 MBD5Q9P267 1494 aa31.34■■■□□ 2.61
HOXC6-204ENST00000509328 KIDINS220Q9ULH0 1771 aa31.31■■■□□ 2.6
HOXC6-204ENST00000509328 MYT1LQ9UL68 1186 aa31.31■■■□□ 2.6
HOXC6-204ENST00000509328 ARHGEF5Q12774 1597 aa31.28■■■□□ 2.6
HOXC6-204ENST00000509328 ABCA6Q8N139 1617 aa31.27■■■□□ 2.6
HOXC6-204ENST00000509328 PTPN23Q9H3S7 1636 aa31.27■■■□□ 2.6
HOXC6-204ENST00000509328 ATP10AO60312 1499 aa31.27■■■□□ 2.6
HOXC6-204ENST00000509328 SPAG9O60271 1321 aaKnown RBP31.27■■■□□ 2.6
HOXC6-204ENST00000509328 DIP2CQ9Y2E4 1556 aa31.27■■■□□ 2.6
HOXC6-204ENST00000509328 RSPH4AQ5TD94 716 aa31.27■■■□□ 2.6
HOXC6-204ENST00000509328 FGD6Q6ZV73 1430 aa31.26■■■□□ 2.6
HOXC6-204ENST00000509328 CCDC141Q6ZP82 1450 aa31.26■■■□□ 2.59
HOXC6-204ENST00000509328 INO80Q9ULG1 1556 aaPredicted RBP31.26■■■□□ 2.59
HOXC6-204ENST00000509328 ATP7AQ04656 1500 aa31.24■■■□□ 2.59
HOXC6-204ENST00000509328 C9orf84Q5VXU9 1444 aa31.24■■■□□ 2.59
HOXC6-204ENST00000509328 SIGLEC1Q9BZZ2 1709 aa31.22■■■□□ 2.59
HOXC6-204ENST00000509328 REREQ9P2R6 1566 aa31.2■■■□□ 2.58
HOXC6-204ENST00000509328 ARID4BQ4LE39 1312 aaPredicted RBP31.2■■■□□ 2.58
HOXC6-204ENST00000509328 TCOF1Q13428 1488 aaKnown RBP31.2■■■□□ 2.58
HOXC6-204ENST00000509328 KDM4FA0A1W2PPD8 638 aa31.19■■■□□ 2.58
HOXC6-204ENST00000509328 PPARGC1BQ86YN6 1023 aaKnown RBP31.19■■■□□ 2.58
HOXC6-204ENST00000509328 BCORL1Q5H9F3 1711 aa31.18■■■□□ 2.58
HOXC6-204ENST00000509328 RTEL1-TNFRSF6BF6WH68 1400 aa31.17■■■□□ 2.58
HOXC6-204ENST00000509328 ADGBQ8N7X0 1667 aa31.13■■■□□ 2.57
HOXC6-204ENST00000509328 TSPY4P0CV99 314 aa31.12■■■□□ 2.57
HOXC6-204ENST00000509328 TSPY10P0CW01 314 aa31.12■■■□□ 2.57
HOXC6-204ENST00000509328 CROCC2H7BZ55 1655 aa31.11■■■□□ 2.57
HOXC6-204ENST00000509328 ADAMTSL3P82987 1691 aa31.11■■■□□ 2.57
HOXC6-204ENST00000509328 MAST1Q9Y2H9 1570 aa31.11■■■□□ 2.57
HOXC6-204ENST00000509328 DNMT1P26358 1616 aaKnown RBP31.1■■■□□ 2.57
HOXC6-204ENST00000509328 AGLP35573 1532 aa31.08■■■□□ 2.57
HOXC6-204ENST00000509328 A2MP01023 1474 aa31.06■■■□□ 2.56
HOXC6-204ENST00000509328 ABCC5O15440 1437 aa31.05■■■□□ 2.56
HOXC6-204ENST00000509328 DAPK1P53355 1430 aa31.05■■■□□ 2.56
HOXC6-204ENST00000509328 PLXNC1O60486 1568 aa31.05■■■□□ 2.56
HOXC6-204ENST00000509328 SHANK2Q9UPX8 1470 aa31.04■■■□□ 2.56
HOXC6-204ENST00000509328 FAM50AQ14320 339 aaKnown RBP31.03■■■□□ 2.56
HOXC6-204ENST00000509328 AEBP2Q6ZN18 517 aaPredicted RBP31.03■■■□□ 2.56
HOXC6-204ENST00000509328 MADDQ8WXG6 1647 aa31.02■■■□□ 2.56
HOXC6-204ENST00000509328 MLECQ14165 292 aa30.99■■■□□ 2.55
HOXC6-204ENST00000509328 FER1L4A9Z1Z3 1794 aa30.98■■■□□ 2.55
HOXC6-204ENST00000509328 DHX29Q7Z478 1369 aaKnown RBP30.96■■■□□ 2.55
HOXC6-204ENST00000509328 RIMS1Q86UR5 1692 aaKnown RBP30.95■■■□□ 2.55
HOXC6-204ENST00000509328 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.93■■■□□ 2.542e-6■□□□□ 11.3
HOXC6-204ENST00000509328 RRBP1Q9P2E9 1410 aaKnown RBP30.9■■■□□ 2.54
HOXC6-204ENST00000509328 PTPRMP28827 1452 aa30.89■■■□□ 2.53
HOXC6-204ENST00000509328 DUOX2Q9NRD8 1548 aa30.87■■■□□ 2.53
HOXC6-204ENST00000509328 ANKRD30AQ9BXX3 1397 aa30.86■■■□□ 2.53
HOXC6-204ENST00000509328 ADGRL2O95490 1459 aa30.85■■■□□ 2.53
HOXC6-204ENST00000509328 KIF15Q9NS87 1388 aa30.85■■■□□ 2.53
HOXC6-204ENST00000509328 CHIC2Q9UKJ5 165 aa30.85■■■□□ 2.53
HOXC6-204ENST00000509328 EIF2AK4Q9P2K8 1649 aaKnown RBP30.84■■■□□ 2.53
HOXC6-204ENST00000509328 NCOA1Q15788 1441 aa30.82■■■□□ 2.52
HOXC6-204ENST00000509328 RRP7BPQ9NSQ0 103 aa30.82■■■□□ 2.52
HOXC6-204ENST00000509328 KIF3BO15066 747 aa30.81■■■□□ 2.52
HOXC6-204ENST00000509328 GGT6Q6P531 493 aa30.8■■■□□ 2.52
HOXC6-204ENST00000509328 PTPRKQ15262 1439 aa30.8■■■□□ 2.52
HOXC6-204ENST00000509328 ESF1Q9H501 851 aaKnown RBP30.79■■■□□ 2.52
HOXC6-204ENST00000509328 ERBINQ96RT1 1412 aa30.77■■■□□ 2.52
HOXC6-204ENST00000509328 CNTLNQ9NXG0 1405 aa30.77■■■□□ 2.52
HOXC6-204ENST00000509328 PPP6R1Q9UPN7 881 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms