RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 SUPT6HQ7KZ85 1726 aaKnown RBP31.77■■■□□ 2.68
HOXC6-204ENST00000509328 LRRC9Q6ZRR7 1453 aa31.76■■■□□ 2.67
HOXC6-204ENST00000509328 APLP2Q06481 763 aa31.74■■■□□ 2.67
HOXC6-204ENST00000509328 GPATCH8Q9UKJ3 1502 aaKnown RBP31.71■■■□□ 2.67
HOXC6-204ENST00000509328 CCNB3Q8WWL7 1395 aa31.7■■■□□ 2.67
HOXC6-204ENST00000509328 ADGRL1O94910 1474 aa31.7■■■□□ 2.66
HOXC6-204ENST00000509328 ITSN2Q9NZM3 1697 aa31.68■■■□□ 2.66
HOXC6-204ENST00000509328 DENND4BO75064 1496 aaPredicted RBP31.68■■■□□ 2.66
HOXC6-204ENST00000509328 RICTORQ6R327 1708 aa31.68■■■□□ 2.66
HOXC6-204ENST00000509328 NCOA2Q15596 1464 aa31.67■■■□□ 2.66
HOXC6-204ENST00000509328 FRMPD1Q5SYB0 1578 aa31.66■■■□□ 2.66
HOXC6-204ENST00000509328 KANK4Q5T7N3 995 aaPredicted RBP31.66■■■□□ 2.66
HOXC6-204ENST00000509328 RAPGEF3O95398 923 aa31.65■■■□□ 2.66
HOXC6-204ENST00000509328 SCAPERQ9BY12 1400 aa31.64■■■□□ 2.66
HOXC6-204ENST00000509328 CFDP1Q9UEE9 299 aaPredicted RBP31.59■■■□□ 2.65
HOXC6-204ENST00000509328 ABCC1P33527 1531 aa31.59■■■□□ 2.65
HOXC6-204ENST00000509328 SAMD9LQ8IVG5 1584 aa31.58■■■□□ 2.65
HOXC6-204ENST00000509328 POGZQ7Z3K3 1410 aa31.58■■■□□ 2.65
HOXC6-204ENST00000509328 ZNF777Q9ULD5 760 aaPredicted RBP31.55■■■□□ 2.64
HOXC6-204ENST00000509328 ZMYM4Q5VZL5 1548 aa31.54■■■□□ 2.64
HOXC6-204ENST00000509328 ZNF518AQ6AHZ1 1483 aa31.52■■■□□ 2.64
HOXC6-204ENST00000509328 PLEKHH2Q8IVE3 1493 aa31.51■■■□□ 2.63
HOXC6-204ENST00000509328 ARHGEF12Q9NZN5 1544 aa31.5■■■□□ 2.63
HOXC6-204ENST00000509328 KDM5CP41229 1560 aa31.47■■■□□ 2.63
HOXC6-204ENST00000509328 SYCP2Q9BX26 1530 aa31.47■■■□□ 2.63
HOXC6-204ENST00000509328 KIAA1107Q9UPP5 1409 aa31.47■■■□□ 2.63
HOXC6-204ENST00000509328 MAGI2Q86UL8 1455 aa31.46■■■□□ 2.63
HOXC6-204ENST00000509328 ARHGEF40Q8TER5 1519 aa31.44■■■□□ 2.62
HOXC6-204ENST00000509328 TRAPPC8Q9Y2L5 1435 aa31.44■■■□□ 2.62
HOXC6-204ENST00000509328 MYOM3Q5VTT5 1437 aa31.43■■■□□ 2.62
HOXC6-204ENST00000509328 AFAP1Q8N556 730 aa31.43■■■□□ 2.62
HOXC6-204ENST00000509328 ZFYVE16Q7Z3T8 1539 aa31.43■■■□□ 2.62
HOXC6-204ENST00000509328 ZNF644Q9H582 1327 aaPredicted RBP31.41■■■□□ 2.62
HOXC6-204ENST00000509328 HECW2Q9P2P5 1572 aa31.4■■■□□ 2.62
HOXC6-204ENST00000509328 HNRNPMP52272 730 aaKnown RBP eCLIP31.4■■■□□ 2.62
HOXC6-204ENST00000509328 CAMSAP2Q08AD1 1489 aa31.4■■■□□ 2.62
HOXC6-204ENST00000509328 MIA2Q96PC5 1412 aa31.39■■■□□ 2.62
HOXC6-204ENST00000509328 MLH3Q9UHC1 1453 aa31.36■■■□□ 2.61
HOXC6-204ENST00000509328 YEATS2Q9ULM3 1422 aa31.36■■■□□ 2.61
HOXC6-204ENST00000509328 MBD5Q9P267 1494 aa31.34■■■□□ 2.61
HOXC6-204ENST00000509328 KIDINS220Q9ULH0 1771 aa31.31■■■□□ 2.6
HOXC6-204ENST00000509328 MYT1LQ9UL68 1186 aa31.31■■■□□ 2.6
HOXC6-204ENST00000509328 ARHGEF5Q12774 1597 aa31.28■■■□□ 2.6
HOXC6-204ENST00000509328 ABCA6Q8N139 1617 aa31.27■■■□□ 2.6
HOXC6-204ENST00000509328 PTPN23Q9H3S7 1636 aa31.27■■■□□ 2.6
HOXC6-204ENST00000509328 ATP10AO60312 1499 aa31.27■■■□□ 2.6
HOXC6-204ENST00000509328 SPAG9O60271 1321 aaKnown RBP31.27■■■□□ 2.6
HOXC6-204ENST00000509328 DIP2CQ9Y2E4 1556 aa31.27■■■□□ 2.6
HOXC6-204ENST00000509328 RSPH4AQ5TD94 716 aa31.27■■■□□ 2.6
HOXC6-204ENST00000509328 FGD6Q6ZV73 1430 aa31.26■■■□□ 2.6
HOXC6-204ENST00000509328 CCDC141Q6ZP82 1450 aa31.26■■■□□ 2.59
HOXC6-204ENST00000509328 INO80Q9ULG1 1556 aaPredicted RBP31.26■■■□□ 2.59
HOXC6-204ENST00000509328 ATP7AQ04656 1500 aa31.24■■■□□ 2.59
HOXC6-204ENST00000509328 C9orf84Q5VXU9 1444 aa31.24■■■□□ 2.59
HOXC6-204ENST00000509328 SIGLEC1Q9BZZ2 1709 aa31.22■■■□□ 2.59
HOXC6-204ENST00000509328 REREQ9P2R6 1566 aa31.2■■■□□ 2.58
HOXC6-204ENST00000509328 ARID4BQ4LE39 1312 aaPredicted RBP31.2■■■□□ 2.58
HOXC6-204ENST00000509328 TCOF1Q13428 1488 aaKnown RBP31.2■■■□□ 2.58
HOXC6-204ENST00000509328 KDM4FA0A1W2PPD8 638 aa31.19■■■□□ 2.58
HOXC6-204ENST00000509328 PPARGC1BQ86YN6 1023 aaKnown RBP31.19■■■□□ 2.58
HOXC6-204ENST00000509328 BCORL1Q5H9F3 1711 aa31.18■■■□□ 2.58
HOXC6-204ENST00000509328 RTEL1-TNFRSF6BF6WH68 1400 aa31.17■■■□□ 2.58
HOXC6-204ENST00000509328 ADGBQ8N7X0 1667 aa31.13■■■□□ 2.57
HOXC6-204ENST00000509328 TSPY4P0CV99 314 aa31.12■■■□□ 2.57
HOXC6-204ENST00000509328 TSPY10P0CW01 314 aa31.12■■■□□ 2.57
HOXC6-204ENST00000509328 CROCC2H7BZ55 1655 aa31.11■■■□□ 2.57
HOXC6-204ENST00000509328 ADAMTSL3P82987 1691 aa31.11■■■□□ 2.57
HOXC6-204ENST00000509328 MAST1Q9Y2H9 1570 aa31.11■■■□□ 2.57
HOXC6-204ENST00000509328 DNMT1P26358 1616 aaKnown RBP31.1■■■□□ 2.57
HOXC6-204ENST00000509328 AGLP35573 1532 aa31.08■■■□□ 2.57
HOXC6-204ENST00000509328 A2MP01023 1474 aa31.06■■■□□ 2.56
HOXC6-204ENST00000509328 ABCC5O15440 1437 aa31.05■■■□□ 2.56
HOXC6-204ENST00000509328 DAPK1P53355 1430 aa31.05■■■□□ 2.56
HOXC6-204ENST00000509328 PLXNC1O60486 1568 aa31.05■■■□□ 2.56
HOXC6-204ENST00000509328 SHANK2Q9UPX8 1470 aa31.04■■■□□ 2.56
HOXC6-204ENST00000509328 FAM50AQ14320 339 aaKnown RBP31.03■■■□□ 2.56
HOXC6-204ENST00000509328 AEBP2Q6ZN18 517 aaPredicted RBP31.03■■■□□ 2.56
HOXC6-204ENST00000509328 MADDQ8WXG6 1647 aa31.02■■■□□ 2.56
HOXC6-204ENST00000509328 MLECQ14165 292 aa30.99■■■□□ 2.55
HOXC6-204ENST00000509328 FER1L4A9Z1Z3 1794 aa30.98■■■□□ 2.55
HOXC6-204ENST00000509328 DHX29Q7Z478 1369 aaKnown RBP30.96■■■□□ 2.55
HOXC6-204ENST00000509328 RIMS1Q86UR5 1692 aaKnown RBP30.95■■■□□ 2.55
HOXC6-204ENST00000509328 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.93■■■□□ 2.542e-6■□□□□ 11.3
HOXC6-204ENST00000509328 RRBP1Q9P2E9 1410 aaKnown RBP30.9■■■□□ 2.54
HOXC6-204ENST00000509328 PTPRMP28827 1452 aa30.89■■■□□ 2.53
HOXC6-204ENST00000509328 DUOX2Q9NRD8 1548 aa30.87■■■□□ 2.53
HOXC6-204ENST00000509328 ANKRD30AQ9BXX3 1397 aa30.86■■■□□ 2.53
HOXC6-204ENST00000509328 ADGRL2O95490 1459 aa30.85■■■□□ 2.53
HOXC6-204ENST00000509328 KIF15Q9NS87 1388 aa30.85■■■□□ 2.53
HOXC6-204ENST00000509328 CHIC2Q9UKJ5 165 aa30.85■■■□□ 2.53
HOXC6-204ENST00000509328 EIF2AK4Q9P2K8 1649 aaKnown RBP30.84■■■□□ 2.53
HOXC6-204ENST00000509328 NCOA1Q15788 1441 aa30.82■■■□□ 2.52
HOXC6-204ENST00000509328 RRP7BPQ9NSQ0 103 aa30.82■■■□□ 2.52
HOXC6-204ENST00000509328 KIF3BO15066 747 aa30.81■■■□□ 2.52
HOXC6-204ENST00000509328 GGT6Q6P531 493 aa30.8■■■□□ 2.52
HOXC6-204ENST00000509328 PTPRKQ15262 1439 aa30.8■■■□□ 2.52
HOXC6-204ENST00000509328 ESF1Q9H501 851 aaKnown RBP30.79■■■□□ 2.52
HOXC6-204ENST00000509328 ERBINQ96RT1 1412 aa30.77■■■□□ 2.52
HOXC6-204ENST00000509328 CNTLNQ9NXG0 1405 aa30.77■■■□□ 2.52
HOXC6-204ENST00000509328 PPP6R1Q9UPN7 881 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms