RNA–Protein interactions for RNA: ENST00000509281.1

SNX2-208, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-208ENST00000509281 ADGRD1Q6QNK2 874 aa12.08□□□□□ -0.48
SNX2-208ENST00000509281 IFFO2Q5TF58 517 aa12.02□□□□□ -0.49
SNX2-208ENST00000509281 HRO43593 1189 aa12.01□□□□□ -0.49
SNX2-208ENST00000509281 EFCAB3Q8N7B9 438 aa12□□□□□ -0.49
SNX2-208ENST00000509281 A0A0G2JS52 829 aa11.97□□□□□ -0.49
SNX2-208ENST00000509281 NUDT7P0C024 238 aa11.97□□□□□ -0.49
SNX2-208ENST00000509281 LHX6Q9UPM6 363 aa11.97□□□□□ -0.49
SNX2-208ENST00000509281 KCTD12Q96CX2 325 aaKnown RBP11.95□□□□□ -0.5
SNX2-208ENST00000509281 MS4A4AQ96JQ5 239 aa11.93□□□□□ -0.5
SNX2-208ENST00000509281 TK2O00142 265 aa11.92□□□□□ -0.5
SNX2-208ENST00000509281 ARHGAP33O14559 1287 aa11.91□□□□□ -0.5
SNX2-208ENST00000509281 EHMT2Q96KQ7 1210 aa11.9□□□□□ -0.5
SNX2-208ENST00000509281 Q6ZNB5 142 aa11.89□□□□□ -0.51
SNX2-208ENST00000509281 DMRTA1Q5VZB9 504 aa11.87□□□□□ -0.51
SNX2-208ENST00000509281 LCE2BO14633 110 aa11.85□□□□□ -0.51
SNX2-208ENST00000509281 PCDHGA4Q9Y5G9 962 aa11.8□□□□□ -0.52
SNX2-208ENST00000509281 PSEN2P49810 448 aa11.79□□□□□ -0.52
SNX2-208ENST00000509281 KLHL34Q8N239 644 aa11.79□□□□□ -0.52
SNX2-208ENST00000509281 KIF3CO14782 793 aa11.78□□□□□ -0.52
SNX2-208ENST00000509281 PTPN5P54829 565 aa11.77□□□□□ -0.53
SNX2-208ENST00000509281 SOX12O15370 315 aa11.75□□□□□ -0.53
SNX2-208ENST00000509281 SLC34A2O95436 690 aa11.75□□□□□ -0.53
SNX2-208ENST00000509281 PHF8Q9UPP1 1060 aa11.74□□□□□ -0.53
SNX2-208ENST00000509281 PSDA5PKW4 1024 aaPredicted RBP11.7□□□□□ -0.54
SNX2-208ENST00000509281 KDM4FA0A1W2PPD8 638 aa11.69□□□□□ -0.54
SNX2-208ENST00000509281 C2orf72A6NCS6 295 aa11.69□□□□□ -0.54
SNX2-208ENST00000509281 VASPP50552 380 aaPredicted RBP11.67□□□□□ -0.54
SNX2-208ENST00000509281 THSD4Q6ZMP0 1018 aa11.66□□□□□ -0.54
SNX2-208ENST00000509281 FBXO3Q9UK99 471 aa11.66□□□□□ -0.54
SNX2-208ENST00000509281 STAC3Q96MF2 364 aa11.64□□□□□ -0.55
SNX2-208ENST00000509281 CIZ1Q9ULV3 898 aaPredicted RBP11.62□□□□□ -0.55
SNX2-208ENST00000509281 FKBP8Q14318 412 aa11.61□□□□□ -0.55
SNX2-208ENST00000509281 TRAF7Q6Q0C0 670 aa11.6□□□□□ -0.55
SNX2-208ENST00000509281 VPS9D1Q9Y2B5 631 aa11.59□□□□□ -0.55
SNX2-208ENST00000509281 LAPTM4AQ15012 233 aa11.56□□□□□ -0.56
SNX2-208ENST00000509281 FBXO22Q8NEZ5 403 aa11.56□□□□□ -0.56
SNX2-208ENST00000509281 ITGBL1O95965 494 aaPredicted RBP11.54□□□□□ -0.56
SNX2-208ENST00000509281 PPP4R3BQ5MIZ7 849 aa11.52□□□□□ -0.57
SNX2-208ENST00000509281 KCNK17Q96T54 332 aa11.52□□□□□ -0.57
SNX2-208ENST00000509281 BHMG1C9JSJ3 638 aaPredicted RBP11.51□□□□□ -0.57
SNX2-208ENST00000509281 SPOCK2Q92563 424 aa11.5□□□□□ -0.57
SNX2-208ENST00000509281 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.48□□□□□ -0.57
SNX2-208ENST00000509281 ZFP91Q96JP5 570 aaPredicted RBP11.48□□□□□ -0.57
SNX2-208ENST00000509281 NLRP6P59044 892 aa11.47□□□□□ -0.57
SNX2-208ENST00000509281 WNT2BQ93097 391 aa11.47□□□□□ -0.57
SNX2-208ENST00000509281 SLC4A5Q9BY07 1137 aa11.47□□□□□ -0.57
SNX2-208ENST00000509281 ZNF775Q96BV0 537 aaPredicted RBP11.45□□□□□ -0.58
SNX2-208ENST00000509281 GFRA3O60609 400 aa11.44□□□□□ -0.58
SNX2-208ENST00000509281 PTCD2Q8WV60 388 aaKnown RBP11.44□□□□□ -0.58
SNX2-208ENST00000509281 RNF25Q96BH1 459 aaPredicted RBP11.42□□□□□ -0.58
SNX2-208ENST00000509281 TRIM41Q8WV44 630 aa11.41□□□□□ -0.58
SNX2-208ENST00000509281 ZNF787Q6DD87 383 aa11.39□□□□□ -0.59
SNX2-208ENST00000509281 KCNH8Q96L42 1107 aa11.39□□□□□ -0.59
SNX2-208ENST00000509281 IFNLR1Q8IU57 520 aaPredicted RBP11.38□□□□□ -0.59
SNX2-208ENST00000509281 RIOK3O14730 519 aaKnown RBP11.37□□□□□ -0.59
SNX2-208ENST00000509281 TMC2Q8TDI7 906 aa11.37□□□□□ -0.59
SNX2-208ENST00000509281 GOLGA8CPA6NN73 597 aa11.36□□□□□ -0.59
SNX2-208ENST00000509281 MFRPQ9BY79 579 aa11.36□□□□□ -0.59
SNX2-208ENST00000509281 MRPL50Q8N5N7 158 aaKnown RBP11.35□□□□□ -0.59
SNX2-208ENST00000509281 NRG2O14511 850 aaPredicted RBP11.33□□□□□ -0.6
SNX2-208ENST00000509281 VGFO15240 615 aaPredicted RBP11.33□□□□□ -0.6
SNX2-208ENST00000509281 ZBED2Q9BTP6 218 aa11.33□□□□□ -0.6
SNX2-208ENST00000509281 BCL2L12Q9HB09 334 aa11.31□□□□□ -0.6
SNX2-208ENST00000509281 LOC100996750A0A140TA64 210 aa11.27□□□□□ -0.61
SNX2-208ENST00000509281 KRTAP4-6Q9BYQ5 205 aa11.27□□□□□ -0.61
SNX2-208ENST00000509281 KCNC4Q03721 635 aa11.24□□□□□ -0.61
SNX2-208ENST00000509281 NBPF3Q9H094 633 aa11.23□□□□□ -0.61
SNX2-208ENST00000509281 PTPREP23469 700 aa11.19□□□□□ -0.62
SNX2-208ENST00000509281 BCAMP50895 628 aa11.19□□□□□ -0.62
SNX2-208ENST00000509281 ZNF454Q8N9F8 522 aa11.19□□□□□ -0.62
SNX2-208ENST00000509281 BCL11BQ9C0K0 894 aaPredicted RBP11.19□□□□□ -0.62
SNX2-208ENST00000509281 FOXK1P85037 733 aa11.18□□□□□ -0.62
SNX2-208ENST00000509281 NYAP1Q6ZVC0 841 aa11.17□□□□□ -0.62
SNX2-208ENST00000509281 PLPP6Q8IY26 295 aa11.17□□□□□ -0.62
SNX2-208ENST00000509281 ANKK1Q8NFD2 765 aa11.17□□□□□ -0.62
SNX2-208ENST00000509281 TBC1D12O60347 775 aa11.15□□□□□ -0.62
SNX2-208ENST00000509281 LCE2AQ5TA79 106 aaPredicted RBP11.15□□□□□ -0.62
SNX2-208ENST00000509281 PRKD2Q9BZL6 878 aa11.15□□□□□ -0.62
SNX2-208ENST00000509281 FOSBP53539 338 aa11.14□□□□□ -0.63
SNX2-208ENST00000509281 SOWAHBA6NEL2 793 aa11.13□□□□□ -0.63
SNX2-208ENST00000509281 WBP1LQ9NX94 342 aa11.11□□□□□ -0.63
SNX2-208ENST00000509281 STK24Q9Y6E0 443 aa11.09□□□□□ -0.63
SNX2-208ENST00000509281 PPP1R37O75864 691 aa11.07□□□□□ -0.64
SNX2-208ENST00000509281 OXER1Q8TDS5 423 aa11.07□□□□□ -0.64
SNX2-208ENST00000509281 DSG2Q14126 1118 aa11.06□□□□□ -0.64
SNX2-208ENST00000509281 RABGEF1Q9UJ41 708 aa11.06□□□□□ -0.64
SNX2-208ENST00000509281 V9GY48 417 aaPredicted RBP11.06□□□□□ -0.64
SNX2-208ENST00000509281 ADAM33Q9BZ11 813 aa11.04□□□□□ -0.64
SNX2-208ENST00000509281 GPHNQ9NQX3 736 aaPredicted RBP11.03□□□□□ -0.64
SNX2-208ENST00000509281 PDZRN3Q9UPQ7 1066 aa11.03□□□□□ -0.64
SNX2-208ENST00000509281 POTECB2RU33 542 aa11.01□□□□□ -0.65
SNX2-208ENST00000509281 TREML4Q6UXN2 200 aa11.01□□□□□ -0.65
SNX2-208ENST00000509281 PROX2Q3B8N5 592 aa11□□□□□ -0.65
SNX2-208ENST00000509281 LAPTM4BQ86VI4 370 aa11□□□□□ -0.65
SNX2-208ENST00000509281 JPH4Q96JJ6 628 aa11□□□□□ -0.65
SNX2-208ENST00000509281 ZFRQ96KR1 1074 aaKnown RBP10.99□□□□□ -0.65
SNX2-208ENST00000509281 PPP1R3GB7ZBB8 358 aa10.96□□□□□ -0.65
SNX2-208ENST00000509281 ZDHHC16Q969W1 377 aa10.96□□□□□ -0.65
SNX2-208ENST00000509281 UPF1Q92900 1129 aaKnown RBP eCLIP10.95□□□□□ -0.66
SNX2-208ENST00000509281 STK25O00506 426 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms