RNA–Protein interactions for RNA: ENST00000509220.1

COMMD8-202, Transcript of COMM domain containing 8, humanhuman

TSL 2

Gene COMMD8, Length 533 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD8-202ENST00000509220 ZMYM4Q5VZL5 1548 aa25.15■■□□□ 1.62
COMMD8-202ENST00000509220 POGZQ7Z3K3 1410 aa25.12■■□□□ 1.61
COMMD8-202ENST00000509220 CDC42BPBQ9Y5S2 1711 aa25.12■■□□□ 1.61
COMMD8-202ENST00000509220 MAGI2Q86UL8 1455 aa25.12■■□□□ 1.61
COMMD8-202ENST00000509220 PREX2Q70Z35 1606 aa25.12■■□□□ 1.61
COMMD8-202ENST00000509220 ARHGEF40Q8TER5 1519 aa25.11■■□□□ 1.61
COMMD8-202ENST00000509220 MTUS2Q5JR59 1369 aa25.07■■□□□ 1.6
COMMD8-202ENST00000509220 CDC42BPAQ5VT25 1732 aa25.07■■□□□ 1.6
COMMD8-202ENST00000509220 PHF23Q9BUL5 403 aaPredicted RBP25.07■■□□□ 1.6
COMMD8-202ENST00000509220 ZFYVE16Q7Z3T8 1539 aa25.06■■□□□ 1.6
COMMD8-202ENST00000509220 ZNF518AQ6AHZ1 1483 aa25.05■■□□□ 1.6
COMMD8-202ENST00000509220 SENP3Q9H4L4 574 aaPredicted RBP25.03■■□□□ 1.6
COMMD8-202ENST00000509220 VPS8Q8N3P4 1428 aa25.02■■□□□ 1.6
COMMD8-202ENST00000509220 YEATS2Q9ULM3 1422 aa25.02■■□□□ 1.6
COMMD8-202ENST00000509220 EHBP1L1Q8N3D4 1523 aa25.02■■□□□ 1.6
COMMD8-202ENST00000509220 GPATCH8Q9UKJ3 1502 aaKnown RBP25.02■■□□□ 1.6
COMMD8-202ENST00000509220 KDM5CP41229 1560 aa25.01■■□□□ 1.59
COMMD8-202ENST00000509220 ARID4BQ4LE39 1312 aaPredicted RBP25■■□□□ 1.59
COMMD8-202ENST00000509220 ABCC1P33527 1531 aa25■■□□□ 1.59
COMMD8-202ENST00000509220 ADAMTSL3P82987 1691 aa24.99■■□□□ 1.59
COMMD8-202ENST00000509220 BCORL1Q5H9F3 1711 aa24.98■■□□□ 1.59
COMMD8-202ENST00000509220 CCNB3Q8WWL7 1395 aa24.98■■□□□ 1.59
COMMD8-202ENST00000509220 AFAP1Q8N556 730 aa24.98■■□□□ 1.59
COMMD8-202ENST00000509220 ATP10AO60312 1499 aa24.96■■□□□ 1.59
COMMD8-202ENST00000509220 ITSN2Q9NZM3 1697 aa24.95■■□□□ 1.58
COMMD8-202ENST00000509220 ARHGEF12Q9NZN5 1544 aa24.95■■□□□ 1.58
COMMD8-202ENST00000509220 CFDP1Q9UEE9 299 aaPredicted RBP24.94■■□□□ 1.58
COMMD8-202ENST00000509220 TIAM1Q13009 1591 aa24.93■■□□□ 1.58
COMMD8-202ENST00000509220 HECW2Q9P2P5 1572 aa24.93■■□□□ 1.58
COMMD8-202ENST00000509220 MLH3Q9UHC1 1453 aa24.93■■□□□ 1.58
COMMD8-202ENST00000509220 TRAPPC8Q9Y2L5 1435 aa24.93■■□□□ 1.58
COMMD8-202ENST00000509220 SAMD9LQ8IVG5 1584 aa24.93■■□□□ 1.58
COMMD8-202ENST00000509220 ZNF777Q9ULD5 760 aaPredicted RBP24.92■■□□□ 1.58
COMMD8-202ENST00000509220 C9orf84Q5VXU9 1444 aa24.92■■□□□ 1.58
COMMD8-202ENST00000509220 PLEKHH2Q8IVE3 1493 aa24.9■■□□□ 1.58
COMMD8-202ENST00000509220 KIAA1107Q9UPP5 1409 aa24.9■■□□□ 1.58
COMMD8-202ENST00000509220 SIGLEC1Q9BZZ2 1709 aa24.89■■□□□ 1.58
COMMD8-202ENST00000509220 MAP3K1Q13233 1512 aa24.88■■□□□ 1.57
COMMD8-202ENST00000509220 MYT1LQ9UL68 1186 aa24.88■■□□□ 1.57
COMMD8-202ENST00000509220 SUPT6HQ7KZ85 1726 aaKnown RBP24.88■■□□□ 1.57
COMMD8-202ENST00000509220 PTPRMP28827 1452 aa24.88■■□□□ 1.57
COMMD8-202ENST00000509220 MADDQ8WXG6 1647 aa24.87■■□□□ 1.57
COMMD8-202ENST00000509220 SYCP2Q9BX26 1530 aa24.86■■□□□ 1.57
COMMD8-202ENST00000509220 DIP2CQ9Y2E4 1556 aa24.85■■□□□ 1.57
COMMD8-202ENST00000509220 REREQ9P2R6 1566 aa24.84■■□□□ 1.57
COMMD8-202ENST00000509220 NCOA2Q15596 1464 aa24.84■■□□□ 1.57
COMMD8-202ENST00000509220 LRRC9Q6ZRR7 1453 aa24.84■■□□□ 1.57
COMMD8-202ENST00000509220 HNRNPMP52272 730 aaKnown RBP eCLIP24.83■■□□□ 1.57
COMMD8-202ENST00000509220 KIDINS220Q9ULH0 1771 aa24.82■■□□□ 1.56
COMMD8-202ENST00000509220 ABCA6Q8N139 1617 aa24.82■■□□□ 1.56
COMMD8-202ENST00000509220 SPAG9O60271 1321 aaKnown RBP24.79■■□□□ 1.56
COMMD8-202ENST00000509220 RIMS1Q86UR5 1692 aaKnown RBP24.78■■□□□ 1.56
COMMD8-202ENST00000509220 MLECQ14165 292 aa24.78■■□□□ 1.56
COMMD8-202ENST00000509220 AGLP35573 1532 aa24.76■■□□□ 1.55
COMMD8-202ENST00000509220 ZNF644Q9H582 1327 aaPredicted RBP24.76■■□□□ 1.55
COMMD8-202ENST00000509220 MBD5Q9P267 1494 aa24.75■■□□□ 1.55
COMMD8-202ENST00000509220 FER1L4A9Z1Z3 1794 aa24.75■■□□□ 1.55
COMMD8-202ENST00000509220 KANK4Q5T7N3 995 aaPredicted RBP24.74■■□□□ 1.55
COMMD8-202ENST00000509220 ATP7AQ04656 1500 aa24.73■■□□□ 1.55
COMMD8-202ENST00000509220 APLP2Q06481 763 aa24.73■■□□□ 1.55
COMMD8-202ENST00000509220 INO80Q9ULG1 1556 aaPredicted RBP24.72■■□□□ 1.55
COMMD8-202ENST00000509220 RSPH4AQ5TD94 716 aa24.71■■□□□ 1.55
COMMD8-202ENST00000509220 CAMSAP2Q08AD1 1489 aa24.7■■□□□ 1.54
COMMD8-202ENST00000509220 RTEL1-TNFRSF6BF6WH68 1400 aa24.68■■□□□ 1.54
COMMD8-202ENST00000509220 CCDC141Q6ZP82 1450 aa24.65■■□□□ 1.54
COMMD8-202ENST00000509220 MIA2Q96PC5 1412 aa24.64■■□□□ 1.54
COMMD8-202ENST00000509220 A2MP01023 1474 aa24.64■■□□□ 1.53
COMMD8-202ENST00000509220 MYOM3Q5VTT5 1437 aa24.63■■□□□ 1.53
COMMD8-202ENST00000509220 PLXNC1O60486 1568 aa24.63■■□□□ 1.53
COMMD8-202ENST00000509220 ARHGEF5Q12774 1597 aa24.63■■□□□ 1.53
COMMD8-202ENST00000509220 ADGBQ8N7X0 1667 aa24.62■■□□□ 1.53
COMMD8-202ENST00000509220 ESF1Q9H501 851 aaKnown RBP24.59■■□□□ 1.53
COMMD8-202ENST00000509220 PLPPR3Q6T4P5 718 aa24.58■■□□□ 1.53
COMMD8-202ENST00000509220 CNTLNQ9NXG0 1405 aa24.58■■□□□ 1.53
COMMD8-202ENST00000509220 LMTK3Q96Q04 1460 aa24.58■■□□□ 1.52
COMMD8-202ENST00000509220 TSPY4P0CV99 314 aa24.56■■□□□ 1.52
COMMD8-202ENST00000509220 TSPY10P0CW01 314 aa24.56■■□□□ 1.52
COMMD8-202ENST00000509220 DHX29Q7Z478 1369 aaKnown RBP24.54■■□□□ 1.52
COMMD8-202ENST00000509220 CEBPAP49715 358 aaPredicted RBP24.54■■□□□ 1.52
COMMD8-202ENST00000509220 PPP6R1Q9UPN7 881 aa24.52■■□□□ 1.52
COMMD8-202ENST00000509220 SETD1BQ9UPS6 1966 aaKnown RBP24.52■■□□□ 1.52
COMMD8-202ENST00000509220 C3P01024 1663 aa24.51■■□□□ 1.51
COMMD8-202ENST00000509220 MAST1Q9Y2H9 1570 aa24.5■■□□□ 1.51
COMMD8-202ENST00000509220 MROH2AA6NES4 1674 aa24.5■■□□□ 1.51
COMMD8-202ENST00000509220 PREX1Q8TCU6 1659 aa24.48■■□□□ 1.51
COMMD8-202ENST00000509220 GGT6Q6P531 493 aa24.47■■□□□ 1.51
COMMD8-202ENST00000509220 PTPN23Q9H3S7 1636 aa24.46■■□□□ 1.51
COMMD8-202ENST00000509220 FGD6Q6ZV73 1430 aa24.45■■□□□ 1.51
COMMD8-202ENST00000509220 ZMYM3Q14202 1370 aa24.44■■□□□ 1.5
COMMD8-202ENST00000509220 TCOF1Q13428 1488 aaKnown RBP24.43■■□□□ 1.5
COMMD8-202ENST00000509220 KIF3BO15066 747 aa24.42■■□□□ 1.5
COMMD8-202ENST00000509220 HSPA2P54652 639 aa24.42■■□□□ 1.5
COMMD8-202ENST00000509220 CLTCQ00610 1675 aaKnown RBP24.42■■□□□ 1.5
COMMD8-202ENST00000509220 UHRF1BP1Q6BDS2 1440 aa24.42■■□□□ 1.5
COMMD8-202ENST00000509220 NPATQ14207 1427 aa24.41■■□□□ 1.5
COMMD8-202ENST00000509220 FAM135AQ9P2D6 1515 aa24.4■■□□□ 1.5
COMMD8-202ENST00000509220 SHANK2Q9UPX8 1470 aa24.39■■□□□ 1.5
COMMD8-202ENST00000509220 ABCC5O15440 1437 aa24.38■■□□□ 1.49
COMMD8-202ENST00000509220 CROCC2H7BZ55 1655 aa24.37■■□□□ 1.49
COMMD8-202ENST00000509220 DNMT1P26358 1616 aaKnown RBP24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms