RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 FGD6Q6ZV73 1430 aa15.87■□□□□ 0.13
RFC1-211ENST00000509084 ABCA9Q8IUA7 1624 aa15.86■□□□□ 0.13
RFC1-211ENST00000509084 NCBP3Q53F19 620 aaKnown RBP15.86■□□□□ 0.13
RFC1-211ENST00000509084 TTC37Q6PGP7 1564 aa15.86■□□□□ 0.13
RFC1-211ENST00000509084 PREX2Q70Z35 1606 aa15.86■□□□□ 0.13
RFC1-211ENST00000509084 MYO5CQ9NQX4 1742 aa15.85■□□□□ 0.13
RFC1-211ENST00000509084 GPATCH8Q9UKJ3 1502 aaKnown RBP15.85■□□□□ 0.13
RFC1-211ENST00000509084 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.85■□□□□ 0.13
RFC1-211ENST00000509084 CDC42BPAQ5VT25 1732 aa15.85■□□□□ 0.13
RFC1-211ENST00000509084 ARAP3Q8WWN8 1544 aa15.84■□□□□ 0.13
RFC1-211ENST00000509084 KCNH8Q96L42 1107 aa15.83■□□□□ 0.12
RFC1-211ENST00000509084 GLI2P10070 1586 aa15.83■□□□□ 0.12
RFC1-211ENST00000509084 PTPN23Q9H3S7 1636 aa15.83■□□□□ 0.12
RFC1-211ENST00000509084 TCOF1Q13428 1488 aaKnown RBP15.82■□□□□ 0.12
RFC1-211ENST00000509084 DIP2BQ9P265 1576 aa15.79■□□□□ 0.12
RFC1-211ENST00000509084 PLCH2O75038 1416 aa15.79■□□□□ 0.12
RFC1-211ENST00000509084 CFDP1Q9UEE9 299 aaPredicted RBP15.79■□□□□ 0.12
RFC1-211ENST00000509084 CDC42BPBQ9Y5S2 1711 aa15.79■□□□□ 0.12
RFC1-211ENST00000509084 ARHGAP5Q13017 1502 aa15.78■□□□□ 0.12
RFC1-211ENST00000509084 CFAP74Q9C0B2 1584 aa15.77■□□□□ 0.11
RFC1-211ENST00000509084 PLEKHH2Q8IVE3 1493 aa15.77■□□□□ 0.11
RFC1-211ENST00000509084 CAMSAP2Q08AD1 1489 aa15.76■□□□□ 0.11
RFC1-211ENST00000509084 MAP3K4Q9Y6R4 1608 aa15.76■□□□□ 0.11
RFC1-211ENST00000509084 FAM50AQ14320 339 aaKnown RBP15.75■□□□□ 0.11
RFC1-211ENST00000509084 CD109Q6YHK3 1445 aa15.75■□□□□ 0.11
RFC1-211ENST00000509084 EFCAB2Q5VUJ9 269 aa15.73■□□□□ 0.11
RFC1-211ENST00000509084 SAMD9LQ8IVG5 1584 aa15.73■□□□□ 0.11
RFC1-211ENST00000509084 PCGF6Q9BYE7 350 aa15.72■□□□□ 0.11
RFC1-211ENST00000509084 FANCAO15360 1455 aa15.71■□□□□ 0.11
RFC1-211ENST00000509084 KIAA1107Q9UPP5 1409 aa15.71■□□□□ 0.11
RFC1-211ENST00000509084 DNMT1P26358 1616 aaKnown RBP15.71■□□□□ 0.11
RFC1-211ENST00000509084 KIF13AQ9H1H9 1805 aa15.7■□□□□ 0.1
RFC1-211ENST00000509084 NEO1Q92859 1461 aa15.7■□□□□ 0.1
RFC1-211ENST00000509084 ARHGEF5Q12774 1597 aa15.7■□□□□ 0.1
RFC1-211ENST00000509084 ABCC1P33527 1531 aa15.69■□□□□ 0.1
RFC1-211ENST00000509084 FAM69CQ0P6D2 419 aa15.69■□□□□ 0.1
RFC1-211ENST00000509084 RNF216Q9NWF9 866 aaPredicted RBP15.69■□□□□ 0.1
RFC1-211ENST00000509084 ZNF777Q9ULD5 760 aaPredicted RBP15.69■□□□□ 0.1
RFC1-211ENST00000509084 TEX14Q8IWB6 1497 aa15.68■□□□□ 0.1
RFC1-211ENST00000509084 HOXD11P31277 338 aaPredicted RBP15.68■□□□□ 0.1
RFC1-211ENST00000509084 RSPH4AQ5TD94 716 aa15.68■□□□□ 0.1
RFC1-211ENST00000509084 CROCC2H7BZ55 1655 aa15.67■□□□□ 0.1
RFC1-211ENST00000509084 SYCP2Q9BX26 1530 aa15.67■□□□□ 0.1
RFC1-211ENST00000509084 DAPK1P53355 1430 aa15.67■□□□□ 0.1
RFC1-211ENST00000509084 CCDC141Q6ZP82 1450 aa15.66■□□□□ 0.1
RFC1-211ENST00000509084 SHANK2Q9UPX8 1470 aa15.66■□□□□ 0.1
RFC1-211ENST00000509084 ZNF644Q9H582 1327 aaPredicted RBP15.66■□□□□ 0.1
RFC1-211ENST00000509084 AKNAQ7Z591 1439 aa15.65■□□□□ 0.1
RFC1-211ENST00000509084 ADGRL1O94910 1474 aa15.65■□□□□ 0.1
RFC1-211ENST00000509084 MBD5Q9P267 1494 aa15.65■□□□□ 0.1
RFC1-211ENST00000509084 ABCC5O15440 1437 aa15.63■□□□□ 0.09
RFC1-211ENST00000509084 ITGAEP38570 1179 aa15.62■□□□□ 0.09
RFC1-211ENST00000509084 PPRC1Q5VV67 1664 aaKnown RBP15.62■□□□□ 0.09
RFC1-211ENST00000509084 ADGBQ8N7X0 1667 aa15.62■□□□□ 0.09
RFC1-211ENST00000509084 MAST1Q9Y2H9 1570 aa15.62■□□□□ 0.09
RFC1-211ENST00000509084 ROCK1Q13464 1354 aa15.61■□□□□ 0.09
RFC1-211ENST00000509084 ADGRL2O95490 1459 aa15.6■□□□□ 0.09
RFC1-211ENST00000509084 SCAPERQ9BY12 1400 aa15.6■□□□□ 0.09
RFC1-211ENST00000509084 ARHGEF12Q9NZN5 1544 aa15.59■□□□□ 0.09
RFC1-211ENST00000509084 TSPOAP1O95153 1857 aa15.59■□□□□ 0.09
RFC1-211ENST00000509084 TSPY4P0CV99 314 aa15.59■□□□□ 0.09
RFC1-211ENST00000509084 TSPY10P0CW01 314 aa15.59■□□□□ 0.09
RFC1-211ENST00000509084 HNRNPMP52272 730 aaKnown RBP eCLIP15.59■□□□□ 0.09
RFC1-211ENST00000509084 PTPRKQ15262 1439 aa15.59■□□□□ 0.09
RFC1-211ENST00000509084 C9orf84Q5VXU9 1444 aa15.59■□□□□ 0.09
RFC1-211ENST00000509084 ZNF518AQ6AHZ1 1483 aa15.59■□□□□ 0.09
RFC1-211ENST00000509084 ANKRD30AQ9BXX3 1397 aa15.57■□□□□ 0.08
RFC1-211ENST00000509084 HFM1A2PYH4 1435 aa15.57■□□□□ 0.08
RFC1-211ENST00000509084 POGZQ7Z3K3 1410 aa15.57■□□□□ 0.08
RFC1-211ENST00000509084 DENND4BO75064 1496 aaPredicted RBP15.57■□□□□ 0.08
RFC1-211ENST00000509084 GCC2Q8IWJ2 1684 aa15.57■□□□□ 0.08
RFC1-211ENST00000509084 TRAPPC8Q9Y2L5 1435 aa15.56■□□□□ 0.08
RFC1-211ENST00000509084 PLXNC1O60486 1568 aa15.55■□□□□ 0.08
RFC1-211ENST00000509084 KDM5CP41229 1560 aa15.55■□□□□ 0.08
RFC1-211ENST00000509084 RTEL1-TNFRSF6BF6WH68 1400 aa15.55■□□□□ 0.08
RFC1-211ENST00000509084 DCAF8L1A6NGE4 600 aa15.54■□□□□ 0.08
RFC1-211ENST00000509084 TRHP20396 242 aaPredicted RBP15.54■□□□□ 0.08
RFC1-211ENST00000509084 INO80Q9ULG1 1556 aaPredicted RBP15.53■□□□□ 0.08
RFC1-211ENST00000509084 SETD5Q9C0A6 1442 aa15.53■□□□□ 0.08
RFC1-211ENST00000509084 NPM3O75607 178 aaKnown RBP15.53■□□□□ 0.08
RFC1-211ENST00000509084 KCNA4P22459 653 aa15.53■□□□□ 0.08
RFC1-211ENST00000509084 ZFYVE16Q7Z3T8 1539 aa15.53■□□□□ 0.08
RFC1-211ENST00000509084 NAIPQ13075 1403 aa15.52■□□□□ 0.08
RFC1-211ENST00000509084 NCOA1Q15788 1441 aa15.52■□□□□ 0.08
RFC1-211ENST00000509084 RICTORQ6R327 1708 aa15.52■□□□□ 0.08
RFC1-211ENST00000509084 ACIN1Q9UKV3 1341 aaKnown RBP15.52■□□□□ 0.08
RFC1-211ENST00000509084 CHIC2Q9UKJ5 165 aa15.52■□□□□ 0.08
RFC1-211ENST00000509084 ATP7AQ04656 1500 aa15.52■□□□□ 0.07
RFC1-211ENST00000509084 SPAG9O60271 1321 aaKnown RBP15.51■□□□□ 0.07
RFC1-211ENST00000509084 HECW2Q9P2P5 1572 aa15.51■□□□□ 0.07
RFC1-211ENST00000509084 ZMYM4Q5VZL5 1548 aa15.5■□□□□ 0.07
RFC1-211ENST00000509084 MLH3Q9UHC1 1453 aa15.5■□□□□ 0.07
RFC1-211ENST00000509084 HRCP23327 699 aa15.49■□□□□ 0.07
RFC1-211ENST00000509084 KIF15Q9NS87 1388 aa15.49■□□□□ 0.07
RFC1-211ENST00000509084 AFAP1Q8N556 730 aa15.48■□□□□ 0.07
RFC1-211ENST00000509084 FRMPD1Q5SYB0 1578 aa15.48■□□□□ 0.07
RFC1-211ENST00000509084 RAB3GAP2Q9H2M9 1393 aa15.48■□□□□ 0.07
RFC1-211ENST00000509084 RRP7BPQ9NSQ0 103 aa15.47■□□□□ 0.07
RFC1-211ENST00000509084 DUOX2Q9NRD8 1548 aa15.47■□□□□ 0.07
RFC1-211ENST00000509084 KIDINS220Q9ULH0 1771 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms