RNA–Protein interactions for RNA: ENST00000508912.1

SSBP2-210, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 256 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-210ENST00000508912 SIGLEC1Q9BZZ2 1709 aa9.71□□□□□ -0.85
SSBP2-210ENST00000508912 IGF1RP08069 1367 aa9.71□□□□□ -0.86
SSBP2-210ENST00000508912 NCBP3Q53F19 620 aaKnown RBP9.7□□□□□ -0.86
SSBP2-210ENST00000508912 PTPRKQ15262 1439 aa9.7□□□□□ -0.86
SSBP2-210ENST00000508912 DENND4BO75064 1496 aaPredicted RBP9.7□□□□□ -0.86
SSBP2-210ENST00000508912 MAGI2Q86UL8 1455 aa9.7□□□□□ -0.86
SSBP2-210ENST00000508912 KIAA0556O60303 1618 aa9.69□□□□□ -0.86
SSBP2-210ENST00000508912 PKD2Q13563 968 aa9.69□□□□□ -0.86
SSBP2-210ENST00000508912 IQGAP2Q13576 1575 aa9.69□□□□□ -0.86
SSBP2-210ENST00000508912 NCKAP5LQ9HCH0 1330 aa9.69□□□□□ -0.86
SSBP2-210ENST00000508912 BIVM-ERCC5R4GMW8 1640 aa9.69□□□□□ -0.86
SSBP2-210ENST00000508912 ABCA9Q8IUA7 1624 aa9.68□□□□□ -0.86
SSBP2-210ENST00000508912 TRAPPC8Q9Y2L5 1435 aa9.68□□□□□ -0.86
SSBP2-210ENST00000508912 EFCAB5A4FU69 1503 aa9.67□□□□□ -0.86
SSBP2-210ENST00000508912 ZFYVE16Q7Z3T8 1539 aa9.67□□□□□ -0.86
SSBP2-210ENST00000508912 CAMSAP1Q5T5Y3 1602 aa9.67□□□□□ -0.86
SSBP2-210ENST00000508912 ZMYM4Q5VZL5 1548 aa9.66□□□□□ -0.86
SSBP2-210ENST00000508912 SETD1AO15047 1707 aaKnown RBP9.65□□□□□ -0.86
SSBP2-210ENST00000508912 MSH5O43196 834 aa9.65□□□□□ -0.86
SSBP2-210ENST00000508912 CPS1P31327 1500 aa9.65□□□□□ -0.86
SSBP2-210ENST00000508912 RICTORQ6R327 1708 aa9.65□□□□□ -0.87
SSBP2-210ENST00000508912 SLC4A1APQ9BWU0 796 aaKnown RBP9.64□□□□□ -0.87
SSBP2-210ENST00000508912 ALKQ9UM73 1620 aa9.64□□□□□ -0.87
SSBP2-210ENST00000508912 UGGT2Q9NYU1 1516 aa9.63□□□□□ -0.87
SSBP2-210ENST00000508912 ATP10AO60312 1499 aa9.62□□□□□ -0.87
SSBP2-210ENST00000508912 PLA2R1Q13018 1463 aa9.61□□□□□ -0.87
SSBP2-210ENST00000508912 NPM3O75607 178 aaKnown RBP9.61□□□□□ -0.87
SSBP2-210ENST00000508912 ABCA8O94911 1581 aa9.61□□□□□ -0.87
SSBP2-210ENST00000508912 TCOF1Q13428 1488 aaKnown RBP9.6□□□□□ -0.87
SSBP2-210ENST00000508912 C9orf84Q5VXU9 1444 aa9.6□□□□□ -0.87
SSBP2-210ENST00000508912 RAPGEF2Q9Y4G8 1499 aa9.59□□□□□ -0.87
SSBP2-210ENST00000508912 CARMIL1Q5VZK9 1371 aa9.59□□□□□ -0.87
SSBP2-210ENST00000508912 SHANK2Q9UPX8 1470 aa9.58□□□□□ -0.88
SSBP2-210ENST00000508912 C3P01024 1663 aa9.57□□□□□ -0.88
SSBP2-210ENST00000508912 ESF1Q9H501 851 aaKnown RBP9.56□□□□□ -0.88
SSBP2-210ENST00000508912 ZRANB1Q9UGI0 708 aa9.56□□□□□ -0.88
SSBP2-210ENST00000508912 HECW1Q76N89 1606 aa9.56□□□□□ -0.88
SSBP2-210ENST00000508912 NPATQ14207 1427 aa9.56□□□□□ -0.88
SSBP2-210ENST00000508912 ATP10BO94823 1461 aa9.55□□□□□ -0.88
SSBP2-210ENST00000508912 RBM33Q96EV2 1170 aaKnown RBP9.55□□□□□ -0.88
SSBP2-210ENST00000508912 KIF27Q86VH2 1401 aa9.54□□□□□ -0.88
SSBP2-210ENST00000508912 CNKSR2Q8WXI2 1034 aa9.53□□□□□ -0.88
SSBP2-210ENST00000508912 TRIM52Q96A61 297 aa9.51□□□□□ -0.89
SSBP2-210ENST00000508912 CFAP74Q9C0B2 1584 aa9.5□□□□□ -0.89
SSBP2-210ENST00000508912 CNTLNQ9NXG0 1405 aa9.5□□□□□ -0.89
SSBP2-210ENST00000508912 ARID3CA6NKF2 412 aa9.49□□□□□ -0.89
SSBP2-210ENST00000508912 ZNF772Q68DY9 489 aaPredicted RBP9.49□□□□□ -0.89
SSBP2-210ENST00000508912 AGLP35573 1532 aa9.49□□□□□ -0.89
SSBP2-210ENST00000508912 FAM9AQ8IZU1 332 aaPredicted RBP9.48□□□□□ -0.89
SSBP2-210ENST00000508912 SCAPERQ9BY12 1400 aa9.48□□□□□ -0.89
SSBP2-210ENST00000508912 GOLGA3Q08378 1498 aa9.47□□□□□ -0.89
SSBP2-210ENST00000508912 LRRC7Q96NW7 1537 aa9.47□□□□□ -0.89
SSBP2-210ENST00000508912 SETBP1Q9Y6X0 1596 aa9.47□□□□□ -0.89
SSBP2-210ENST00000508912 RXRBP28702 533 aa9.47□□□□□ -0.89
SSBP2-210ENST00000508912 MAPK8IP2Q13387 824 aaPredicted RBP9.47□□□□□ -0.89
SSBP2-210ENST00000508912 FAM135BQ49AJ0 1406 aa9.47□□□□□ -0.89
SSBP2-210ENST00000508912 CDK12Q9NYV4 1490 aaPredicted RBP9.47□□□□□ -0.89
SSBP2-210ENST00000508912 CSRNP3Q8WYN3 585 aa9.46□□□□□ -0.9
SSBP2-210ENST00000508912 ZMYM3Q14202 1370 aa9.45□□□□□ -0.9
SSBP2-210ENST00000508912 VWDEQ8N2E2 1590 aa9.45□□□□□ -0.9
SSBP2-210ENST00000508912 ZNF142P52746 1687 aaPredicted RBP9.45□□□□□ -0.9
SSBP2-210ENST00000508912 REREQ9P2R6 1566 aa9.44□□□□□ -0.9
SSBP2-210ENST00000508912 CEP170BQ9Y4F5 1589 aaPredicted RBP9.44□□□□□ -0.9
SSBP2-210ENST00000508912 RNF17Q9BXT8 1623 aaKnown RBP9.44□□□□□ -0.9
SSBP2-210ENST00000508912 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.42□□□□□ -0.9
SSBP2-210ENST00000508912 HNRNPUL2Q1KMD3 747 aaKnown RBP9.42□□□□□ -0.9
SSBP2-210ENST00000508912 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.41□□□□□ -0.9
SSBP2-210ENST00000508912 NEURL4Q96JN8 1562 aa9.4□□□□□ -0.9
SSBP2-210ENST00000508912 MYO3AQ8NEV4 1616 aa9.39□□□□□ -0.91
SSBP2-210ENST00000508912 PLEKHD1A6NEE1 506 aa9.39□□□□□ -0.91
SSBP2-210ENST00000508912 YY1P25490 414 aa9.39□□□□□ -0.91
SSBP2-210ENST00000508912 SUPT6HQ7KZ85 1726 aaKnown RBP9.39□□□□□ -0.91
SSBP2-210ENST00000508912 JCADQ9P266 1359 aa9.38□□□□□ -0.91
SSBP2-210ENST00000508912 ANKLE2Q86XL3 938 aa9.38□□□□□ -0.91
SSBP2-210ENST00000508912 ZNF518AQ6AHZ1 1483 aa9.38□□□□□ -0.91
SSBP2-210ENST00000508912 MROH2AA6NES4 1674 aa9.38□□□□□ -0.91
SSBP2-210ENST00000508912 A2ML1A8K2U0 1454 aa9.37□□□□□ -0.91
SSBP2-210ENST00000508912 DIP2CQ9Y2E4 1556 aa9.37□□□□□ -0.91
SSBP2-210ENST00000508912 MED14O60244 1454 aa9.36□□□□□ -0.91
SSBP2-210ENST00000508912 AFAP1Q8N556 730 aa9.36□□□□□ -0.91
SSBP2-210ENST00000508912 PLCH2O75038 1416 aa9.36□□□□□ -0.91
SSBP2-210ENST00000508912 SYNMO15061 1565 aa9.36□□□□□ -0.91
SSBP2-210ENST00000508912 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.36□□□□□ -0.917e-7■■■■□ 22.1
SSBP2-210ENST00000508912 LRP5O75197 1615 aa9.35□□□□□ -0.91
SSBP2-210ENST00000508912 DNMT1P26358 1616 aaKnown RBP9.35□□□□□ -0.91
SSBP2-210ENST00000508912 SPATA31A6Q5VVP1 1343 aa9.34□□□□□ -0.91
SSBP2-210ENST00000508912 KDM5CP41229 1560 aa9.34□□□□□ -0.91
SSBP2-210ENST00000508912 NUTM2BA6NNL0 878 aaPredicted RBP9.34□□□□□ -0.91
SSBP2-210ENST00000508912 NUTM2EB1AL46 878 aaPredicted RBP9.34□□□□□ -0.91
SSBP2-210ENST00000508912 MEX3CQ5U5Q3 659 aaKnown RBP9.34□□□□□ -0.91
SSBP2-210ENST00000508912 NUTM2DQ5VT03 806 aaPredicted RBP9.34□□□□□ -0.91
SSBP2-210ENST00000508912 EFCAB2Q5VUJ9 269 aa9.34□□□□□ -0.91
SSBP2-210ENST00000508912 NUTM2AQ8IVF1 878 aaPredicted RBP9.34□□□□□ -0.91
SSBP2-210ENST00000508912 MYT1LQ9UL68 1186 aa9.34□□□□□ -0.91
SSBP2-210ENST00000508912 CDK13Q14004 1512 aaKnown RBP9.34□□□□□ -0.91
SSBP2-210ENST00000508912 POLR1AO95602 1720 aaPredicted RBP9.34□□□□□ -0.92
SSBP2-210ENST00000508912 NPHP4O75161 1426 aaPredicted RBP9.33□□□□□ -0.92
SSBP2-210ENST00000508912 CCDC125Q86Z20 511 aa9.33□□□□□ -0.92
SSBP2-210ENST00000508912 ATAD2Q6PL18 1390 aa9.33□□□□□ -0.92
SSBP2-210ENST00000508912 MLH3Q9UHC1 1453 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms