RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 DENND4BO75064 1496 aaPredicted RBP13.99□□□□□ -0.17
SNCA-211ENST00000508895 CFAP74Q9C0B2 1584 aa13.99□□□□□ -0.17
SNCA-211ENST00000508895 YEATS2Q9ULM3 1422 aa13.98□□□□□ -0.17
SNCA-211ENST00000508895 ARHGEF12Q9NZN5 1544 aa13.98□□□□□ -0.17
SNCA-211ENST00000508895 SCAPERQ9BY12 1400 aa13.98□□□□□ -0.17
SNCA-211ENST00000508895 PREX2Q70Z35 1606 aa13.97□□□□□ -0.17
SNCA-211ENST00000508895 CDK11AQ9UQ88 783 aaPredicted RBP13.97□□□□□ -0.17
SNCA-211ENST00000508895 LMTK3Q96Q04 1460 aa13.97□□□□□ -0.17
SNCA-211ENST00000508895 ARHGEF40Q8TER5 1519 aa13.96□□□□□ -0.17
SNCA-211ENST00000508895 ARHGAP5Q13017 1502 aa13.95□□□□□ -0.18
SNCA-211ENST00000508895 ZMYM4Q5VZL5 1548 aa13.95□□□□□ -0.18
SNCA-211ENST00000508895 POGZQ7Z3K3 1410 aa13.95□□□□□ -0.18
SNCA-211ENST00000508895 EFCAB2Q5VUJ9 269 aa13.93□□□□□ -0.18
SNCA-211ENST00000508895 AFAP1Q8N556 730 aa13.93□□□□□ -0.18
SNCA-211ENST00000508895 ADAMTSL3P82987 1691 aa13.93□□□□□ -0.18
SNCA-211ENST00000508895 GPATCH8Q9UKJ3 1502 aaKnown RBP13.93□□□□□ -0.18
SNCA-211ENST00000508895 SAMD9LQ8IVG5 1584 aa13.92□□□□□ -0.18
SNCA-211ENST00000508895 TRAPPC8Q9Y2L5 1435 aa13.92□□□□□ -0.18
SNCA-211ENST00000508895 BCORL1Q5H9F3 1711 aa13.92□□□□□ -0.18
SNCA-211ENST00000508895 ITSN2Q9NZM3 1697 aa13.91□□□□□ -0.18
SNCA-211ENST00000508895 ABCC1P33527 1531 aa13.91□□□□□ -0.18
SNCA-211ENST00000508895 ZFYVE16Q7Z3T8 1539 aa13.91□□□□□ -0.18
SNCA-211ENST00000508895 SOCS7O14512 581 aa13.9□□□□□ -0.18
SNCA-211ENST00000508895 KDM5CP41229 1560 aa13.9□□□□□ -0.18
SNCA-211ENST00000508895 TIAM1Q13009 1591 aa13.9□□□□□ -0.18
SNCA-211ENST00000508895 VPS8Q8N3P4 1428 aa13.89□□□□□ -0.19
SNCA-211ENST00000508895 MADDQ8WXG6 1647 aa13.88□□□□□ -0.19
SNCA-211ENST00000508895 ZNF644Q9H582 1327 aaPredicted RBP13.88□□□□□ -0.19
SNCA-211ENST00000508895 MTUS2Q5JR59 1369 aa13.87□□□□□ -0.19
SNCA-211ENST00000508895 ABCA6Q8N139 1617 aa13.87□□□□□ -0.19
SNCA-211ENST00000508895 KIDINS220Q9ULH0 1771 aa13.86□□□□□ -0.19
SNCA-211ENST00000508895 EHBP1L1Q8N3D4 1523 aa13.86□□□□□ -0.19
SNCA-211ENST00000508895 SYCP2Q9BX26 1530 aa13.86□□□□□ -0.19
SNCA-211ENST00000508895 KANK4Q5T7N3 995 aaPredicted RBP13.86□□□□□ -0.19
SNCA-211ENST00000508895 ILDR2Q71H61 639 aa13.86□□□□□ -0.19
SNCA-211ENST00000508895 ZNF777Q9ULD5 760 aaPredicted RBP13.86□□□□□ -0.19
SNCA-211ENST00000508895 DIP2CQ9Y2E4 1556 aa13.86□□□□□ -0.19
SNCA-211ENST00000508895 HNRNPMP52272 730 aaKnown RBP eCLIP13.85□□□□□ -0.19
SNCA-211ENST00000508895 ZNF518AQ6AHZ1 1483 aa13.85□□□□□ -0.19
SNCA-211ENST00000508895 RIMS1Q86UR5 1692 aaKnown RBP13.85□□□□□ -0.19
SNCA-211ENST00000508895 MAGI2Q86UL8 1455 aa13.84□□□□□ -0.19
SNCA-211ENST00000508895 ARID4BQ4LE39 1312 aaPredicted RBP13.84□□□□□ -0.19
SNCA-211ENST00000508895 ATP10AO60312 1499 aa13.83□□□□□ -0.2
SNCA-211ENST00000508895 PTPRMP28827 1452 aa13.83□□□□□ -0.2
SNCA-211ENST00000508895 CCNB3Q8WWL7 1395 aa13.83□□□□□ -0.2
SNCA-211ENST00000508895 NCOA2Q15596 1464 aa13.82□□□□□ -0.2
SNCA-211ENST00000508895 MLECQ14165 292 aa13.81□□□□□ -0.2
SNCA-211ENST00000508895 LRRC9Q6ZRR7 1453 aa13.8□□□□□ -0.2
SNCA-211ENST00000508895 MLH3Q9UHC1 1453 aa13.8□□□□□ -0.2
SNCA-211ENST00000508895 CFDP1Q9UEE9 299 aaPredicted RBP13.8□□□□□ -0.2
SNCA-211ENST00000508895 SUPT6HQ7KZ85 1726 aaKnown RBP13.8□□□□□ -0.2
SNCA-211ENST00000508895 C9orf84Q5VXU9 1444 aa13.8□□□□□ -0.2
SNCA-211ENST00000508895 MBD5Q9P267 1494 aa13.79□□□□□ -0.2
SNCA-211ENST00000508895 FER1L4A9Z1Z3 1794 aa13.78□□□□□ -0.2
SNCA-211ENST00000508895 INO80Q9ULG1 1556 aaPredicted RBP13.77□□□□□ -0.21
SNCA-211ENST00000508895 REREQ9P2R6 1566 aa13.75□□□□□ -0.21
SNCA-211ENST00000508895 KIAA1107Q9UPP5 1409 aa13.75□□□□□ -0.21
SNCA-211ENST00000508895 PLPPR3Q6T4P5 718 aa13.75□□□□□ -0.21
SNCA-211ENST00000508895 MYT1LQ9UL68 1186 aa13.75□□□□□ -0.21
SNCA-211ENST00000508895 MAP3K1Q13233 1512 aa13.74□□□□□ -0.21
SNCA-211ENST00000508895 CAMSAP2Q08AD1 1489 aa13.74□□□□□ -0.21
SNCA-211ENST00000508895 ATP7AQ04656 1500 aa13.74□□□□□ -0.21
SNCA-211ENST00000508895 CEBPAP49715 358 aaPredicted RBP13.73□□□□□ -0.21
SNCA-211ENST00000508895 DISP3Q9P2K9 1392 aa13.72□□□□□ -0.21
SNCA-211ENST00000508895 SPAG9O60271 1321 aaKnown RBP13.72□□□□□ -0.21
SNCA-211ENST00000508895 AGLP35573 1532 aa13.71□□□□□ -0.21
SNCA-211ENST00000508895 PLEKHH2Q8IVE3 1493 aa13.71□□□□□ -0.21
SNCA-211ENST00000508895 ADGBQ8N7X0 1667 aa13.71□□□□□ -0.21
SNCA-211ENST00000508895 PLXNC1O60486 1568 aa13.71□□□□□ -0.22
SNCA-211ENST00000508895 C3P01024 1663 aa13.68□□□□□ -0.22
SNCA-211ENST00000508895 A2MP01023 1474 aa13.67□□□□□ -0.22
SNCA-211ENST00000508895 MYOM3Q5VTT5 1437 aa13.66□□□□□ -0.22
SNCA-211ENST00000508895 CCDC141Q6ZP82 1450 aa13.66□□□□□ -0.22
SNCA-211ENST00000508895 ARHGEF5Q12774 1597 aa13.66□□□□□ -0.22
SNCA-211ENST00000508895 HSPA2P54652 639 aa13.65□□□□□ -0.22
SNCA-211ENST00000508895 CLTCQ00610 1675 aaKnown RBP13.63□□□□□ -0.23
SNCA-211ENST00000508895 RTEL1-TNFRSF6BF6WH68 1400 aa13.63□□□□□ -0.23
SNCA-211ENST00000508895 PTPN23Q9H3S7 1636 aa13.62□□□□□ -0.23
SNCA-211ENST00000508895 MIA2Q96PC5 1412 aa13.61□□□□□ -0.23
SNCA-211ENST00000508895 DHX29Q7Z478 1369 aaKnown RBP13.6□□□□□ -0.23
SNCA-211ENST00000508895 PPARGC1BQ86YN6 1023 aaKnown RBP13.6□□□□□ -0.23
SNCA-211ENST00000508895 MAST1Q9Y2H9 1570 aa13.6□□□□□ -0.23
SNCA-211ENST00000508895 SETD1BQ9UPS6 1966 aaKnown RBP13.6□□□□□ -0.23
SNCA-211ENST00000508895 PREX1Q8TCU6 1659 aa13.59□□□□□ -0.23
SNCA-211ENST00000508895 ABCC5O15440 1437 aa13.59□□□□□ -0.23
SNCA-211ENST00000508895 FGD6Q6ZV73 1430 aa13.59□□□□□ -0.23
SNCA-211ENST00000508895 GGT6Q6P531 493 aa13.59□□□□□ -0.23
SNCA-211ENST00000508895 CROCC2H7BZ55 1655 aa13.59□□□□□ -0.23
SNCA-211ENST00000508895 TCOF1Q13428 1488 aaKnown RBP13.58□□□□□ -0.24
SNCA-211ENST00000508895 MROH2AA6NES4 1674 aa13.58□□□□□ -0.24
SNCA-211ENST00000508895 STRCQ7RTU9 1775 aa13.57□□□□□ -0.24
SNCA-211ENST00000508895 ZMYM3Q14202 1370 aa13.57□□□□□ -0.24
SNCA-211ENST00000508895 APLP2Q06481 763 aa13.56□□□□□ -0.24
SNCA-211ENST00000508895 DNMT1P26358 1616 aaKnown RBP13.55□□□□□ -0.24
SNCA-211ENST00000508895 MROH1Q8NDA8 1641 aa13.55□□□□□ -0.24
SNCA-211ENST00000508895 KIF3BO15066 747 aa13.55□□□□□ -0.24
SNCA-211ENST00000508895 RSPH4AQ5TD94 716 aa13.54□□□□□ -0.24
SNCA-211ENST00000508895 DAPK1P53355 1430 aa13.54□□□□□ -0.24
SNCA-211ENST00000508895 PTPRKQ15262 1439 aa13.53□□□□□ -0.24
SNCA-211ENST00000508895 CNTLNQ9NXG0 1405 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms