RNA–Protein interactions for RNA: ENST00000508639.5

SIL1-210, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-210ENST00000508639 LMTK3Q96Q04 1460 aa17.43■□□□□ 0.38
SIL1-210ENST00000508639 POGZQ7Z3K3 1410 aa17.42■□□□□ 0.38
SIL1-210ENST00000508639 ZFYVE16Q7Z3T8 1539 aa17.42■□□□□ 0.38
SIL1-210ENST00000508639 TROQ12816 1431 aaPredicted RBP17.4■□□□□ 0.38
SIL1-210ENST00000508639 MAGI2Q86UL8 1455 aa17.39■□□□□ 0.37
SIL1-210ENST00000508639 MYO5CQ9NQX4 1742 aa17.39■□□□□ 0.37
SIL1-210ENST00000508639 PCF11O94913 1555 aaKnown RBP17.38■□□□□ 0.37
SIL1-210ENST00000508639 EFCAB2Q5VUJ9 269 aa17.38■□□□□ 0.37
SIL1-210ENST00000508639 AFAP1Q8N556 730 aa17.38■□□□□ 0.37
SIL1-210ENST00000508639 CDC42BPBQ9Y5S2 1711 aa17.38■□□□□ 0.37
SIL1-210ENST00000508639 HSPA2P54652 639 aa17.36■□□□□ 0.37
SIL1-210ENST00000508639 MLECQ14165 292 aa17.36■□□□□ 0.37
SIL1-210ENST00000508639 ATP10AO60312 1499 aa17.36■□□□□ 0.37
SIL1-210ENST00000508639 ARHGEF12Q9NZN5 1544 aa17.36■□□□□ 0.37
SIL1-210ENST00000508639 CASKIN1Q8WXD9 1431 aa17.34■□□□□ 0.37
SIL1-210ENST00000508639 CDK11AQ9UQ88 783 aaPredicted RBP17.33■□□□□ 0.36
SIL1-210ENST00000508639 KDM5CP41229 1560 aa17.32■□□□□ 0.36
SIL1-210ENST00000508639 PLPPR3Q6T4P5 718 aa17.32■□□□□ 0.36
SIL1-210ENST00000508639 TRAPPC8Q9Y2L5 1435 aa17.31■□□□□ 0.36
SIL1-210ENST00000508639 CEBPAP49715 358 aaPredicted RBP17.31■□□□□ 0.36
SIL1-210ENST00000508639 ARHGAP5Q13017 1502 aa17.3■□□□□ 0.36
SIL1-210ENST00000508639 FER1L4A9Z1Z3 1794 aa17.3■□□□□ 0.36
SIL1-210ENST00000508639 C9orf84Q5VXU9 1444 aa17.3■□□□□ 0.36
SIL1-210ENST00000508639 ZNF518AQ6AHZ1 1483 aa17.28■□□□□ 0.36
SIL1-210ENST00000508639 DIP2CQ9Y2E4 1556 aa17.28■□□□□ 0.36
SIL1-210ENST00000508639 PREX2Q70Z35 1606 aa17.27■□□□□ 0.36
SIL1-210ENST00000508639 CDC42BPAQ5VT25 1732 aa17.27■□□□□ 0.35
SIL1-210ENST00000508639 FBXO41Q8TF61 875 aa17.26■□□□□ 0.35
SIL1-210ENST00000508639 ABCA6Q8N139 1617 aa17.25■□□□□ 0.35
SIL1-210ENST00000508639 MLH3Q9UHC1 1453 aa17.25■□□□□ 0.35
SIL1-210ENST00000508639 CLIP1P30622 1438 aa17.25■□□□□ 0.35
SIL1-210ENST00000508639 ABCC1P33527 1531 aa17.25■□□□□ 0.35
SIL1-210ENST00000508639 KIDINS220Q9ULH0 1771 aa17.23■□□□□ 0.35
SIL1-210ENST00000508639 CCDC18Q5T9S5 1454 aa17.23■□□□□ 0.35
SIL1-210ENST00000508639 ITSN2Q9NZM3 1697 aa17.23■□□□□ 0.35
SIL1-210ENST00000508639 REREQ9P2R6 1566 aa17.22■□□□□ 0.35
SIL1-210ENST00000508639 FYCO1Q9BQS8 1478 aa17.21■□□□□ 0.35
SIL1-210ENST00000508639 GPATCH8Q9UKJ3 1502 aaKnown RBP17.21■□□□□ 0.34
SIL1-210ENST00000508639 SAMD9LQ8IVG5 1584 aa17.19■□□□□ 0.34
SIL1-210ENST00000508639 SETD1BQ9UPS6 1966 aaKnown RBP17.19■□□□□ 0.34
SIL1-210ENST00000508639 STRCQ7RTU9 1775 aa17.18■□□□□ 0.34
SIL1-210ENST00000508639 AGLP35573 1532 aa17.18■□□□□ 0.34
SIL1-210ENST00000508639 HNRNPMP52272 730 aaKnown RBP eCLIP17.17■□□□□ 0.347e-7■■■■□ 23.6
SIL1-210ENST00000508639 C3P01024 1663 aa17.16■□□□□ 0.34
SIL1-210ENST00000508639 PREX1Q8TCU6 1659 aa17.16■□□□□ 0.34
SIL1-210ENST00000508639 ZNF777Q9ULD5 760 aaPredicted RBP17.14■□□□□ 0.33
SIL1-210ENST00000508639 MYT1LQ9UL68 1186 aa17.13■□□□□ 0.33
SIL1-210ENST00000508639 SYCP2Q9BX26 1530 aa17.12■□□□□ 0.33
SIL1-210ENST00000508639 ZNF644Q9H582 1327 aaPredicted RBP17.12■□□□□ 0.33
SIL1-210ENST00000508639 CERKQ8TCT0 537 aa17.11■□□□□ 0.33
SIL1-210ENST00000508639 KIAA1107Q9UPP5 1409 aa17.08■□□□□ 0.32
SIL1-210ENST00000508639 MBD5Q9P267 1494 aa17.06■□□□□ 0.32
SIL1-210ENST00000508639 SPAG9O60271 1321 aaKnown RBP17.06■□□□□ 0.32
SIL1-210ENST00000508639 CFDP1Q9UEE9 299 aaPredicted RBP17.06■□□□□ 0.32
SIL1-210ENST00000508639 SUPT6HQ7KZ85 1726 aaKnown RBP17.06■□□□□ 0.32
SIL1-210ENST00000508639 TIAM1Q13009 1591 aa17.06■□□□□ 0.32
SIL1-210ENST00000508639 INO80Q9ULG1 1556 aaPredicted RBP17.06■□□□□ 0.32
SIL1-210ENST00000508639 UHRF1BP1Q6BDS2 1440 aa17.05■□□□□ 0.32
SIL1-210ENST00000508639 PLXNC1O60486 1568 aa17.05■□□□□ 0.32
SIL1-210ENST00000508639 ATP7AQ04656 1500 aa17.05■□□□□ 0.32
SIL1-210ENST00000508639 CCNB3Q8WWL7 1395 aa17.04■□□□□ 0.32
SIL1-210ENST00000508639 ZMYM3Q14202 1370 aa17.03■□□□□ 0.32
SIL1-210ENST00000508639 MTUS2Q5JR59 1369 aa17.02■□□□□ 0.32
SIL1-210ENST00000508639 CEP162Q5TB80 1403 aa17.02■□□□□ 0.31
SIL1-210ENST00000508639 A2MP01023 1474 aa17■□□□□ 0.31
SIL1-210ENST00000508639 LOC105371045A0A1W2PR82 267 aa17■□□□□ 0.31
SIL1-210ENST00000508639 CNTLNQ9NXG0 1405 aa17■□□□□ 0.31
SIL1-210ENST00000508639 MROH2AA6NES4 1674 aa17■□□□□ 0.31
SIL1-210ENST00000508639 PLEKHH2Q8IVE3 1493 aa16.99■□□□□ 0.31
SIL1-210ENST00000508639 PTPRTO14522 1441 aa16.99■□□□□ 0.31
SIL1-210ENST00000508639 LTBP4Q8N2S1 1624 aa16.99■□□□□ 0.31
SIL1-210ENST00000508639 CLTCQ00610 1675 aaKnown RBP16.98■□□□□ 0.31
SIL1-210ENST00000508639 NPATQ14207 1427 aa16.97■□□□□ 0.31
SIL1-210ENST00000508639 NCOA1Q15788 1441 aa16.97■□□□□ 0.31
SIL1-210ENST00000508639 EHBP1L1Q8N3D4 1523 aa16.97■□□□□ 0.31
SIL1-210ENST00000508639 PTPRKQ15262 1439 aa16.96■□□□□ 0.31
SIL1-210ENST00000508639 DMRT2Q9Y5R5 561 aa16.96■□□□□ 0.31
SIL1-210ENST00000508639 GGT6Q6P531 493 aa16.95■□□□□ 0.3
SIL1-210ENST00000508639 ESF1Q9H501 851 aaKnown RBP16.95■□□□□ 0.3
SIL1-210ENST00000508639 NCOA2Q15596 1464 aa16.94■□□□□ 0.3
SIL1-210ENST00000508639 RTEL1-TNFRSF6BF6WH68 1400 aa16.94■□□□□ 0.3
SIL1-210ENST00000508639 ADGBQ8N7X0 1667 aa16.94■□□□□ 0.3
SIL1-210ENST00000508639 NCKAP5LQ9HCH0 1330 aa16.94■□□□□ 0.3
SIL1-210ENST00000508639 CAMSAP1Q5T5Y3 1602 aa16.93■□□□□ 0.3
SIL1-210ENST00000508639 DHX29Q7Z478 1369 aaKnown RBP16.92■□□□□ 0.3
SIL1-210ENST00000508639 KANK4Q5T7N3 995 aaPredicted RBP16.9■□□□□ 0.3
SIL1-210ENST00000508639 FBXO31Q5XUX0 539 aaPredicted RBP16.89■□□□□ 0.29
SIL1-210ENST00000508639 MYO3AQ8NEV4 1616 aa16.88■□□□□ 0.29
SIL1-210ENST00000508639 ZNF142P52746 1687 aaPredicted RBP16.88■□□□□ 0.29
SIL1-210ENST00000508639 CAMSAP2Q08AD1 1489 aa16.88■□□□□ 0.29
SIL1-210ENST00000508639 PPP6R1Q9UPN7 881 aa16.88■□□□□ 0.29
SIL1-210ENST00000508639 TCOF1Q13428 1488 aaKnown RBP16.86■□□□□ 0.29
SIL1-210ENST00000508639 CEP170BQ9Y4F5 1589 aaPredicted RBP16.86■□□□□ 0.29
SIL1-210ENST00000508639 CCDC141Q6ZP82 1450 aa16.86■□□□□ 0.29
SIL1-210ENST00000508639 KIF3BO15066 747 aa16.85■□□□□ 0.29
SIL1-210ENST00000508639 ZNF335Q9H4Z2 1342 aaPredicted RBP16.85■□□□□ 0.29
SIL1-210ENST00000508639 LRRC9Q6ZRR7 1453 aa16.85■□□□□ 0.29
SIL1-210ENST00000508639 DNMT1P26358 1616 aaKnown RBP16.83■□□□□ 0.28
SIL1-210ENST00000508639 ARHGEF5Q12774 1597 aa16.83■□□□□ 0.28
SIL1-210ENST00000508639 PLA2R1Q13018 1463 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 471.2 ms