RNA–Protein interactions for RNA: ENST00000508579.5

CAST-222, Transcript of calpastatin, human

TSL 2 BASIC

Gene CAST, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-222	ENST00000508579	FAM43A	Q8N2R8	423 aa		11.13	□□□□□ -0.63
CAST-222	ENST00000508579	CAPN15	O75808	1086 aa		11.13	□□□□□ -0.63
CAST-222	ENST00000508579	OS9	Q13438	667 aa	Predicted RBP	11.13	□□□□□ -0.63
CAST-222	ENST00000508579	TRIM44	Q96DX7	344 aa	Predicted RBP	11.13	□□□□□ -0.63
CAST-222	ENST00000508579	NECTIN2	Q92692	538 aa		11.12	□□□□□ -0.63
CAST-222	ENST00000508579	CCDC27	Q2M243	656 aa		11.11	□□□□□ -0.63
CAST-222	ENST00000508579	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.11	□□□□□ -0.63
CAST-222	ENST00000508579	HSP90AA1	P07900	732 aa	Known RBP	11.1	□□□□□ -0.63
CAST-222	ENST00000508579	IRX3	P78415	501 aa	Predicted RBP	11.1	□□□□□ -0.63
CAST-222	ENST00000508579	CEP120	Q8N960	986 aa		11.09	□□□□□ -0.63
CAST-222	ENST00000508579	FAM177A1	Q8N128	213 aa	Predicted RBP	11.08	□□□□□ -0.64
CAST-222	ENST00000508579	SP7	Q8TDD2	431 aa	Predicted RBP	11.08	□□□□□ -0.64
CAST-222	ENST00000508579	ANP32A	P39687	249 aa	Known RBP	11.08	□□□□□ -0.64
CAST-222	ENST00000508579	WASHC2C	Q9Y4E1	1318 aa		11.07	□□□□□ -0.64
CAST-222	ENST00000508579	HDAC5	Q9UQL6	1122 aa		11.07	□□□□□ -0.64
CAST-222	ENST00000508579	HSP90AB4P	Q58FF6	505 aa		11.05	□□□□□ -0.64
CAST-222	ENST00000508579	MYO15B	Q96JP2	1530 aa		11.05	□□□□□ -0.64
CAST-222	ENST00000508579	FKBP8	Q14318	412 aa		11.05	□□□□□ -0.64
CAST-222	ENST00000508579	PLEKHD1	A6NEE1	506 aa		11.03	□□□□□ -0.64
CAST-222	ENST00000508579	APP	P05067	770 aa		11.03	□□□□□ -0.64
CAST-222	ENST00000508579	RAD21	O60216	631 aa		11.02	□□□□□ -0.65
CAST-222	ENST00000508579	NBPF20	Q3BBV1	942 aa		11.02	□□□□□ -0.65
CAST-222	ENST00000508579	USP35	Q9P2H5	1018 aa		11.02	□□□□□ -0.65
CAST-222	ENST00000508579	ZNF830	Q96NB3	372 aa	Predicted RBP	11.01	□□□□□ -0.65
CAST-222	ENST00000508579	RGS3	P49796	1198 aa		11	□□□□□ -0.65
CAST-222	ENST00000508579	PDCL3	Q9H2J4	239 aa		11	□□□□□ -0.65
CAST-222	ENST00000508579	KCTD17	Q8N5Z5	321 aa		10.99	□□□□□ -0.65
CAST-222	ENST00000508579	TTC36	A6NLP5	189 aa		10.98	□□□□□ -0.65
CAST-222	ENST00000508579	NBPF11	Q86T75	865 aa		10.98	□□□□□ -0.65
CAST-222	ENST00000508579	TMEM51	Q9NW97	253 aa		10.98	□□□□□ -0.65
CAST-222	ENST00000508579	WASHC2A	Q641Q2	1341 aa		10.98	□□□□□ -0.65
CAST-222	ENST00000508579	NBPF1	Q3BBV0	1214 aa		10.97	□□□□□ -0.65
CAST-222	ENST00000508579	EXOC8	Q8IYI6	725 aa		10.97	□□□□□ -0.65
CAST-222	ENST00000508579	RBM25	P49756	843 aa	Known RBP	10.96	□□□□□ -0.65
CAST-222	ENST00000508579	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.95	□□□□□ -0.66
CAST-222	ENST00000508579	PSEN1	P49768	467 aa		10.95	□□□□□ -0.66
CAST-222	ENST00000508579	CC2D1B	Q5T0F9	858 aa	Known RBP	10.95	□□□□□ -0.66
CAST-222	ENST00000508579	TAF3	Q5VWG9	929 aa		10.95	□□□□□ -0.66
CAST-222	ENST00000508579	SMAP1	Q8IYB5	467 aa	Predicted RBP	10.95	□□□□□ -0.66
CAST-222	ENST00000508579	PLCD3	Q8N3E9	789 aa		10.95	□□□□□ -0.66
CAST-222	ENST00000508579	ZCCHC6	Q5VYS8	1495 aa	Known RBP	10.94	□□□□□ -0.66
CAST-222	ENST00000508579	ZBTB22	O15209	634 aa		10.94	□□□□□ -0.66
CAST-222	ENST00000508579	CHRDL2	Q6WN34	429 aa		10.94	□□□□□ -0.66
CAST-222	ENST00000508579	UTP14C	Q5TAP6	766 aa	Known RBP	10.93	□□□□□ -0.66
CAST-222	ENST00000508579	CASC1	Q6TDU7	716 aa		10.93	□□□□□ -0.66
CAST-222	ENST00000508579	TMTC2	Q8N394	836 aa		10.93	□□□□□ -0.66
CAST-222	ENST00000508579	TRIM41	Q8WV44	630 aa		10.93	□□□□□ -0.66
CAST-222	ENST00000508579	NOP58	Q9Y2X3	529 aa	Known RBP	10.93	□□□□□ -0.66
CAST-222	ENST00000508579	LAS1L	Q9Y4W2	734 aa	Known RBP	10.92	□□□□□ -0.66
CAST-222	ENST00000508579	MTMR7	Q9Y216	660 aa		10.91	□□□□□ -0.66
CAST-222	ENST00000508579	FAM50A	Q14320	339 aa	Known RBP	10.9	□□□□□ -0.66
CAST-222	ENST00000508579	ZNF428	Q96B54	188 aa		10.9	□□□□□ -0.66
CAST-222	ENST00000508579	KDM4A	O75164	1064 aa		10.9	□□□□□ -0.67
CAST-222	ENST00000508579	SLC4A2	P04920	1241 aa		10.9	□□□□□ -0.67
CAST-222	ENST00000508579	TCERG1	O14776	1098 aa	Known RBP	10.88	□□□□□ -0.67
CAST-222	ENST00000508579	CARD10	Q9BWT7	1032 aa		10.88	□□□□□ -0.67
CAST-222	ENST00000508579	ZNF219	Q9P2Y4	722 aa	Predicted RBP	10.88	□□□□□ -0.67
CAST-222	ENST00000508579	SLC52A1	Q9NWF4	448 aa		10.88	□□□□□ -0.67
CAST-222	ENST00000508579	TRH	P20396	242 aa	Predicted RBP	10.87	□□□□□ -0.67
CAST-222	ENST00000508579	EGFL6	Q8IUX8	553 aa		10.87	□□□□□ -0.67
CAST-222	ENST00000508579	MAP7D2	Q96T17	732 aa		10.87	□□□□□ -0.67
CAST-222	ENST00000508579	RBM42	Q9BTD8	480 aa	Known RBP	10.87	□□□□□ -0.67
CAST-222	ENST00000508579	MYCN	P04198	464 aa	Predicted RBP	10.86	□□□□□ -0.67
CAST-222	ENST00000508579	TNNT2	P45379	298 aa	Predicted RBP	10.86	□□□□□ -0.67
CAST-222	ENST00000508579	HSP90AB3P	Q58FF7	597 aa		10.86	□□□□□ -0.67
CAST-222	ENST00000508579	YY1AP1	Q9H869	796 aa		10.86	□□□□□ -0.67
CAST-222	ENST00000508579	SH3BP1	Q9Y3L3	701 aa		10.85	□□□□□ -0.67
CAST-222	ENST00000508579	SLC20A2	Q08357	652 aa		10.85	□□□□□ -0.67
CAST-222	ENST00000508579	RALBP1	Q15311	655 aa		10.85	□□□□□ -0.67
CAST-222	ENST00000508579	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	10.84	□□□□□ -0.67
CAST-222	ENST00000508579	SOX12	O15370	315 aa		10.84	□□□□□ -0.67
CAST-222	ENST00000508579	HNRNPUL2	Q1KMD3	747 aa	Known RBP	10.84	□□□□□ -0.67
CAST-222	ENST00000508579	NBPF9	Q3BBW0	867 aa		10.84	□□□□□ -0.67
CAST-222	ENST00000508579	TSHZ1	Q6ZSZ6	1077 aa		10.84	□□□□□ -0.67
CAST-222	ENST00000508579	FAM9B	Q8IZU0	186 aa		10.84	□□□□□ -0.67
CAST-222	ENST00000508579	LOC102724159	A0A0B4J2E5	919 aa		10.82	□□□□□ -0.68
CAST-222	ENST00000508579	ABCB7	O75027	752 aa		10.82	□□□□□ -0.68
CAST-222	ENST00000508579	PWP2	Q15269	919 aa	Known RBP	10.82	□□□□□ -0.68
CAST-222	ENST00000508579	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10.82	□□□□□ -0.68
CAST-222	ENST00000508579	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	10.82	□□□□□ -0.68
CAST-222	ENST00000508579	NRDC	O43847	1150 aa		10.82	□□□□□ -0.68
CAST-222	ENST00000508579	SPTY2D1	Q68D10	685 aa	Predicted RBP	10.82	□□□□□ -0.68
CAST-222	ENST00000508579		E9PSI1	815 aa		10.81	□□□□□ -0.68
CAST-222	ENST00000508579	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
CAST-222	ENST00000508579	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	10.81	□□□□□ -0.68	7e-19	■■■■■ 104.3
CAST-222	ENST00000508579	KIF20A	O95235	890 aa		10.8	□□□□□ -0.68
CAST-222	ENST00000508579	TPM2	P07951	284 aa		10.8	□□□□□ -0.68
CAST-222	ENST00000508579	RINL	Q6ZS11	566 aa		10.8	□□□□□ -0.68
CAST-222	ENST00000508579	GEMIN8	Q9NWZ8	242 aa	Known RBP	10.8	□□□□□ -0.68
CAST-222	ENST00000508579	CCDC125	Q86Z20	511 aa		10.8	□□□□□ -0.68
CAST-222	ENST00000508579	OTUD6B	Q8N6M0	293 aa		10.8	□□□□□ -0.68
CAST-222	ENST00000508579	C1orf115	Q9H7X2	142 aa		10.8	□□□□□ -0.68
CAST-222	ENST00000508579	PPP4R3B	Q5MIZ7	849 aa		10.78	□□□□□ -0.68
CAST-222	ENST00000508579	RIPOR2	Q9Y4F9	1068 aa		10.78	□□□□□ -0.68
CAST-222	ENST00000508579	TERF2IP	Q9NYB0	399 aa		10.77	□□□□□ -0.68
CAST-222	ENST00000508579	GOLGA6L3	A6NEY3	463 aa		10.77	□□□□□ -0.69
CAST-222	ENST00000508579	DNTTIP2	Q5QJE6	756 aa	Known RBP	10.77	□□□□□ -0.69
CAST-222	ENST00000508579	CADPS	Q9ULU8	1353 aa		10.76	□□□□□ -0.69
CAST-222	ENST00000508579	SSR1	P43307	286 aa	Known RBP	10.75	□□□□□ -0.69
CAST-222	ENST00000508579	SETDB1	Q15047	1291 aa		10.75	□□□□□ -0.69

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