RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 PPP1R37O75864 691 aa11.84□□□□□ -0.51
PDLIM5-211ENST00000508531 FAM205CA6NFA0 338 aa11.81□□□□□ -0.52
PDLIM5-211ENST00000508531 RIMBP2O15034 1052 aa11.8□□□□□ -0.52
PDLIM5-211ENST00000508531 HOXB1P14653 301 aaPredicted RBP11.8□□□□□ -0.52
PDLIM5-211ENST00000508531 HS3ST6Q96QI5 342 aa11.79□□□□□ -0.52
PDLIM5-211ENST00000508531 POTEB3A0JP26 581 aa11.78□□□□□ -0.52
PDLIM5-211ENST00000508531 POTEBQ6S5H4 581 aa11.78□□□□□ -0.52
PDLIM5-211ENST00000508531 C2orf72A6NCS6 295 aa11.77□□□□□ -0.53
PDLIM5-211ENST00000508531 KIF3CO14782 793 aa11.76□□□□□ -0.53
PDLIM5-211ENST00000508531 NKX1-1Q15270 411 aaPredicted RBP11.76□□□□□ -0.53
PDLIM5-211ENST00000508531 DCAF8L2P0C7V8 631 aa11.75□□□□□ -0.53
PDLIM5-211ENST00000508531 DNAJC5Q9H3Z4 198 aa11.74□□□□□ -0.53
PDLIM5-211ENST00000508531 ZSWIM6Q9HCJ5 1215 aa11.73□□□□□ -0.53
PDLIM5-211ENST00000508531 TMC2Q8TDI7 906 aa11.72□□□□□ -0.53
PDLIM5-211ENST00000508531 ERBB3P21860 1342 aa11.71□□□□□ -0.53
PDLIM5-211ENST00000508531 GPR153Q6NV75 609 aa11.71□□□□□ -0.53
PDLIM5-211ENST00000508531 ARSIQ5FYB1 569 aa11.7□□□□□ -0.54
PDLIM5-211ENST00000508531 KHSRPQ92945 711 aaKnown RBP eCLIP11.68□□□□□ -0.541e-6■■■■□ 21
PDLIM5-211ENST00000508531 VARS2Q5ST30 1063 aaKnown RBP11.66□□□□□ -0.54
PDLIM5-211ENST00000508531 KRTAP3-3Q9BYR6 98 aa11.66□□□□□ -0.54
PDLIM5-211ENST00000508531 KRTAP3-2Q9BYR7 98 aa11.66□□□□□ -0.54
PDLIM5-211ENST00000508531 RYDENQ9NUL5 291 aaKnown RBP11.64□□□□□ -0.55
PDLIM5-211ENST00000508531 SPNS2Q8IVW8 549 aa11.62□□□□□ -0.55
PDLIM5-211ENST00000508531 GTPBP6O43824 516 aaPredicted RBP11.59□□□□□ -0.55
PDLIM5-211ENST00000508531 SLC34A2O95436 690 aa11.59□□□□□ -0.55
PDLIM5-211ENST00000508531 NUDT7P0C024 238 aa11.59□□□□□ -0.55
PDLIM5-211ENST00000508531 GPHNQ9NQX3 736 aaPredicted RBP11.59□□□□□ -0.55
PDLIM5-211ENST00000508531 PCDHGA4Q9Y5G9 962 aa11.58□□□□□ -0.56
PDLIM5-211ENST00000508531 ZNF316A6NFI3 1004 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-211ENST00000508531 FOXK1P85037 733 aa11.57□□□□□ -0.56
PDLIM5-211ENST00000508531 PLPP6Q8IY26 295 aa11.57□□□□□ -0.56
PDLIM5-211ENST00000508531 DSG2Q14126 1118 aa11.56□□□□□ -0.56
PDLIM5-211ENST00000508531 MMRN1Q13201 1228 aa11.55□□□□□ -0.56
PDLIM5-211ENST00000508531 ZNF687Q8N1G0 1237 aa11.55□□□□□ -0.56
PDLIM5-211ENST00000508531 LHX6Q9UPM6 363 aa11.52□□□□□ -0.57
PDLIM5-211ENST00000508531 AMER1Q5JTC6 1135 aaPredicted RBP11.51□□□□□ -0.57
PDLIM5-211ENST00000508531 CRISPLD2Q9H0B8 497 aa11.51□□□□□ -0.57
PDLIM5-211ENST00000508531 PTCD2Q8WV60 388 aaKnown RBP11.49□□□□□ -0.57
PDLIM5-211ENST00000508531 NCKAP5LQ9HCH0 1330 aa11.48□□□□□ -0.57
PDLIM5-211ENST00000508531 RTN4Q9NQC3 1192 aaKnown RBP11.47□□□□□ -0.57
PDLIM5-211ENST00000508531 PDE4AP27815 886 aa11.46□□□□□ -0.57
PDLIM5-211ENST00000508531 PPP1R15BQ5SWA1 713 aa11.46□□□□□ -0.57
PDLIM5-211ENST00000508531 TBC1D12O60347 775 aa11.43□□□□□ -0.58
PDLIM5-211ENST00000508531 UPF1Q92900 1129 aaKnown RBP eCLIP11.43□□□□□ -0.58
PDLIM5-211ENST00000508531 KDM4FA0A1W2PPD8 638 aa11.42□□□□□ -0.58
PDLIM5-211ENST00000508531 LARP6Q9BRS8 491 aaKnown RBP11.42□□□□□ -0.58
PDLIM5-211ENST00000508531 BBXQ8WY36 941 aaPredicted RBP11.41□□□□□ -0.58
PDLIM5-211ENST00000508531 ANKRD13DQ6ZTN6 518 aa11.39□□□□□ -0.59
PDLIM5-211ENST00000508531 CADPS2Q86UW7 1296 aa11.39□□□□□ -0.59
PDLIM5-211ENST00000508531 OXER1Q8TDS5 423 aa11.39□□□□□ -0.59
PDLIM5-211ENST00000508531 AXIN2Q9Y2T1 843 aa11.39□□□□□ -0.59
PDLIM5-211ENST00000508531 POTEEQ6S8J3 1075 aa11.38□□□□□ -0.59
PDLIM5-211ENST00000508531 DDX27Q96GQ7 796 aaKnown RBP11.38□□□□□ -0.59
PDLIM5-211ENST00000508531 PSDA5PKW4 1024 aaPredicted RBP11.37□□□□□ -0.59
PDLIM5-211ENST00000508531 LSM11P83369 360 aaKnown RBP eCLIP11.37□□□□□ -0.591e-7■■■■■ 32.8
PDLIM5-211ENST00000508531 PBX2P40425 430 aa11.36□□□□□ -0.59
PDLIM5-211ENST00000508531 MFSD10Q14728 455 aa11.34□□□□□ -0.59
PDLIM5-211ENST00000508531 PPP4R3BQ5MIZ7 849 aa11.32□□□□□ -0.6
PDLIM5-211ENST00000508531 RNF166Q96A37 237 aaPredicted RBP11.32□□□□□ -0.6
PDLIM5-211ENST00000508531 MYT1LQ9UL68 1186 aa11.32□□□□□ -0.6
PDLIM5-211ENST00000508531 ARHGAP33O14559 1287 aa11.3□□□□□ -0.6
PDLIM5-211ENST00000508531 SPRYD3Q8NCJ5 442 aa11.29□□□□□ -0.6
PDLIM5-211ENST00000508531 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.29□□□□□ -0.6
PDLIM5-211ENST00000508531 PTGER2P43116 358 aa11.28□□□□□ -0.6
PDLIM5-211ENST00000508531 PSEN2P49810 448 aa11.28□□□□□ -0.6
PDLIM5-211ENST00000508531 ZNF454Q8N9F8 522 aa11.27□□□□□ -0.61
PDLIM5-211ENST00000508531 EMILIN3Q9NT22 766 aa11.27□□□□□ -0.61
PDLIM5-211ENST00000508531 EVI5O60447 810 aa11.26□□□□□ -0.61
PDLIM5-211ENST00000508531 MAP3K9P80192 1104 aa11.26□□□□□ -0.61
PDLIM5-211ENST00000508531 DMRTA1Q5VZB9 504 aa11.26□□□□□ -0.61
PDLIM5-211ENST00000508531 PAXIP1Q6ZW49 1069 aaPredicted RBP11.24□□□□□ -0.61
PDLIM5-211ENST00000508531 CFAP44Q96MT7 982 aa11.24□□□□□ -0.61
PDLIM5-211ENST00000508531 ADGRD1Q6QNK2 874 aa11.23□□□□□ -0.61
PDLIM5-211ENST00000508531 ANO8Q9HCE9 1232 aaPredicted RBP11.23□□□□□ -0.61
PDLIM5-211ENST00000508531 FOSBP53539 338 aa11.22□□□□□ -0.61
PDLIM5-211ENST00000508531 KCNK17Q96T54 332 aa11.22□□□□□ -0.61
PDLIM5-211ENST00000508531 JPH4Q96JJ6 628 aa11.19□□□□□ -0.62
PDLIM5-211ENST00000508531 KCNH8Q96L42 1107 aa11.18□□□□□ -0.62
PDLIM5-211ENST00000508531 TK2O00142 265 aa11.17□□□□□ -0.62
PDLIM5-211ENST00000508531 CAMK2BQ13554 666 aa11.17□□□□□ -0.62
PDLIM5-211ENST00000508531 BCL2L12Q9HB09 334 aa11.17□□□□□ -0.62
PDLIM5-211ENST00000508531 DPYSL4O14531 572 aa11.15□□□□□ -0.62
PDLIM5-211ENST00000508531 ZDHHC16Q969W1 377 aa11.15□□□□□ -0.62
PDLIM5-211ENST00000508531 HRO43593 1189 aa11.14□□□□□ -0.63
PDLIM5-211ENST00000508531 ADAM33Q9BZ11 813 aa11.14□□□□□ -0.63
PDLIM5-211ENST00000508531 PTPREP23469 700 aa11.13□□□□□ -0.63
PDLIM5-211ENST00000508531 PCDHGA10Q9Y5H3 936 aa11.12□□□□□ -0.63
PDLIM5-211ENST00000508531 VPS9D1Q9Y2B5 631 aa11.11□□□□□ -0.63
PDLIM5-211ENST00000508531 STAC3Q96MF2 364 aa11.09□□□□□ -0.63
PDLIM5-211ENST00000508531 PHF14O94880 888 aa11.07□□□□□ -0.64
PDLIM5-211ENST00000508531 TYW1BQ6NUM6 668 aa11.07□□□□□ -0.64
PDLIM5-211ENST00000508531 ZBED2Q9BTP6 218 aa11.07□□□□□ -0.64
PDLIM5-211ENST00000508531 SLC4A5Q9BY07 1137 aa11.06□□□□□ -0.64
PDLIM5-211ENST00000508531 WDR70Q9NW82 654 aa11.05□□□□□ -0.64
PDLIM5-211ENST00000508531 E2F4Q16254 413 aa11.04□□□□□ -0.64
PDLIM5-211ENST00000508531 KCTD12Q96CX2 325 aaKnown RBP11.04□□□□□ -0.64
PDLIM5-211ENST00000508531 DDX12PQ92771 950 aa11.03□□□□□ -0.64
PDLIM5-211ENST00000508531 FBXW7Q969H0 707 aa11.03□□□□□ -0.64
PDLIM5-211ENST00000508531 PPP1R3GB7ZBB8 358 aa11.02□□□□□ -0.65
PDLIM5-211ENST00000508531 COL9A1P20849 921 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms