RNA–Protein interactions for RNA: ENST00000508523.5

GRAMD2B-208, Transcript of GRAM domain containing 2B, humanhuman

TSL 3

Gene GRAMD2B, Length 679 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-208ENST00000508523 DOK7Q18PE1 504 aa13.55□□□□□ -0.24
GRAMD2B-208ENST00000508523 POTEBQ6S5H4 581 aa13.55□□□□□ -0.24
GRAMD2B-208ENST00000508523 CHGAP10645 457 aaKnown RBP13.54□□□□□ -0.24
GRAMD2B-208ENST00000508523 HOXB1P14653 301 aaPredicted RBP13.54□□□□□ -0.24
GRAMD2B-208ENST00000508523 EMP3P54852 163 aa13.54□□□□□ -0.24
GRAMD2B-208ENST00000508523 NKX1-1Q15270 411 aaPredicted RBP13.52□□□□□ -0.25
GRAMD2B-208ENST00000508523 ZNF710Q8N1W2 664 aa13.49□□□□□ -0.25
GRAMD2B-208ENST00000508523 C2orf72A6NCS6 295 aa13.48□□□□□ -0.25
GRAMD2B-208ENST00000508523 HS3ST6Q96QI5 342 aa13.48□□□□□ -0.25
GRAMD2B-208ENST00000508523 FAM205CA6NFA0 338 aa13.46□□□□□ -0.25
GRAMD2B-208ENST00000508523 GPR153Q6NV75 609 aa13.46□□□□□ -0.25
GRAMD2B-208ENST00000508523 ZSWIM6Q9HCJ5 1215 aa13.46□□□□□ -0.25
GRAMD2B-208ENST00000508523 RIMBP2O15034 1052 aa13.43□□□□□ -0.26
GRAMD2B-208ENST00000508523 KRTAP3-3Q9BYR6 98 aa13.4□□□□□ -0.26
GRAMD2B-208ENST00000508523 KRTAP3-2Q9BYR7 98 aa13.4□□□□□ -0.26
GRAMD2B-208ENST00000508523 ARSIQ5FYB1 569 aa13.36□□□□□ -0.27
GRAMD2B-208ENST00000508523 TMC2Q8TDI7 906 aa13.35□□□□□ -0.27
GRAMD2B-208ENST00000508523 KHSRPQ92945 711 aaKnown RBP eCLIP13.35□□□□□ -0.27
GRAMD2B-208ENST00000508523 ERBB3P21860 1342 aa13.34□□□□□ -0.27
GRAMD2B-208ENST00000508523 SLC34A2O95436 690 aa13.33□□□□□ -0.28
GRAMD2B-208ENST00000508523 SPNS2Q8IVW8 549 aa13.32□□□□□ -0.28
GRAMD2B-208ENST00000508523 GTPBP6O43824 516 aaPredicted RBP13.31□□□□□ -0.28
GRAMD2B-208ENST00000508523 VARS2Q5ST30 1063 aaKnown RBP13.31□□□□□ -0.28
GRAMD2B-208ENST00000508523 GPHNQ9NQX3 736 aaPredicted RBP13.29□□□□□ -0.28
GRAMD2B-208ENST00000508523 RYDENQ9NUL5 291 aaKnown RBP13.29□□□□□ -0.28
GRAMD2B-208ENST00000508523 FOXK1P85037 733 aa13.28□□□□□ -0.28
GRAMD2B-208ENST00000508523 PCDHGA4Q9Y5G9 962 aa13.26□□□□□ -0.29
GRAMD2B-208ENST00000508523 MMRN1Q13201 1228 aa13.24□□□□□ -0.29
GRAMD2B-208ENST00000508523 DSG2Q14126 1118 aa13.24□□□□□ -0.29
GRAMD2B-208ENST00000508523 ZNF687Q8N1G0 1237 aa13.24□□□□□ -0.29
GRAMD2B-208ENST00000508523 ZNF316A6NFI3 1004 aaPredicted RBP13.23□□□□□ -0.29
GRAMD2B-208ENST00000508523 NUDT7P0C024 238 aa13.23□□□□□ -0.29
GRAMD2B-208ENST00000508523 DCAF8L2P0C7V8 631 aa13.23□□□□□ -0.29
GRAMD2B-208ENST00000508523 CRISPLD2Q9H0B8 497 aa13.23□□□□□ -0.29
GRAMD2B-208ENST00000508523 KDM4FA0A1W2PPD8 638 aa13.22□□□□□ -0.29
GRAMD2B-208ENST00000508523 PLPP6Q8IY26 295 aa13.22□□□□□ -0.29
GRAMD2B-208ENST00000508523 PTCD2Q8WV60 388 aaKnown RBP13.2□□□□□ -0.3
GRAMD2B-208ENST00000508523 NCKAP5LQ9HCH0 1330 aa13.19□□□□□ -0.3
GRAMD2B-208ENST00000508523 LHX6Q9UPM6 363 aa13.17□□□□□ -0.3
GRAMD2B-208ENST00000508523 AMER1Q5JTC6 1135 aaPredicted RBP13.13□□□□□ -0.31
GRAMD2B-208ENST00000508523 RTN4Q9NQC3 1192 aaKnown RBP13.13□□□□□ -0.31
GRAMD2B-208ENST00000508523 POTEEQ6S8J3 1075 aa13.11□□□□□ -0.31
GRAMD2B-208ENST00000508523 PPP1R15BQ5SWA1 713 aa13.09□□□□□ -0.31
GRAMD2B-208ENST00000508523 OXER1Q8TDS5 423 aa13.09□□□□□ -0.31
GRAMD2B-208ENST00000508523 PDE4AP27815 886 aa13.07□□□□□ -0.32
GRAMD2B-208ENST00000508523 CADPS2Q86UW7 1296 aa13.07□□□□□ -0.32
GRAMD2B-208ENST00000508523 MFSD10Q14728 455 aa13.06□□□□□ -0.32
GRAMD2B-208ENST00000508523 BBXQ8WY36 941 aaPredicted RBP13.05□□□□□ -0.32
GRAMD2B-208ENST00000508523 LARP6Q9BRS8 491 aaKnown RBP13.02□□□□□ -0.33
GRAMD2B-208ENST00000508523 PBX2P40425 430 aa13.01□□□□□ -0.33
GRAMD2B-208ENST00000508523 LSM11P83369 360 aaKnown RBP eCLIP13.01□□□□□ -0.33
GRAMD2B-208ENST00000508523 TBC1D12O60347 775 aa13□□□□□ -0.33
GRAMD2B-208ENST00000508523 UPF1Q92900 1129 aaKnown RBP eCLIP13□□□□□ -0.33
GRAMD2B-208ENST00000508523 DDX27Q96GQ7 796 aaKnown RBP13□□□□□ -0.33
GRAMD2B-208ENST00000508523 PSDA5PKW4 1024 aaPredicted RBP12.99□□□□□ -0.33
GRAMD2B-208ENST00000508523 AXIN2Q9Y2T1 843 aa12.99□□□□□ -0.33
GRAMD2B-208ENST00000508523 ANKRD13DQ6ZTN6 518 aa12.95□□□□□ -0.34
GRAMD2B-208ENST00000508523 EMILIN3Q9NT22 766 aa12.94□□□□□ -0.34
GRAMD2B-208ENST00000508523 ARHGAP33O14559 1287 aa12.92□□□□□ -0.34
GRAMD2B-208ENST00000508523 ANO8Q9HCE9 1232 aaPredicted RBP12.92□□□□□ -0.34
GRAMD2B-208ENST00000508523 MYT1LQ9UL68 1186 aa12.92□□□□□ -0.34
GRAMD2B-208ENST00000508523 PTGER2P43116 358 aa12.91□□□□□ -0.34
GRAMD2B-208ENST00000508523 PPP4R3BQ5MIZ7 849 aa12.91□□□□□ -0.34
GRAMD2B-208ENST00000508523 RNF166Q96A37 237 aaPredicted RBP12.91□□□□□ -0.34
GRAMD2B-208ENST00000508523 PSEN2P49810 448 aa12.88□□□□□ -0.35
GRAMD2B-208ENST00000508523 DMRTA1Q5VZB9 504 aa12.88□□□□□ -0.35
GRAMD2B-208ENST00000508523 EVI5O60447 810 aa12.87□□□□□ -0.35
GRAMD2B-208ENST00000508523 CAMK2BQ13554 666 aa12.87□□□□□ -0.35
GRAMD2B-208ENST00000508523 FOSBP53539 338 aa12.86□□□□□ -0.35
GRAMD2B-208ENST00000508523 SPRYD3Q8NCJ5 442 aa12.86□□□□□ -0.35
GRAMD2B-208ENST00000508523 ADGRD1Q6QNK2 874 aa12.85□□□□□ -0.35
GRAMD2B-208ENST00000508523 ZNF454Q8N9F8 522 aa12.84□□□□□ -0.35
GRAMD2B-208ENST00000508523 TK2O00142 265 aa12.82□□□□□ -0.36
GRAMD2B-208ENST00000508523 JPH4Q96JJ6 628 aa12.82□□□□□ -0.36
GRAMD2B-208ENST00000508523 BCL2L12Q9HB09 334 aa12.82□□□□□ -0.36
GRAMD2B-208ENST00000508523 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.82□□□□□ -0.36
GRAMD2B-208ENST00000508523 HRO43593 1189 aa12.81□□□□□ -0.36
GRAMD2B-208ENST00000508523 MAP3K9P80192 1104 aa12.81□□□□□ -0.36
GRAMD2B-208ENST00000508523 KCNK17Q96T54 332 aa12.79□□□□□ -0.36
GRAMD2B-208ENST00000508523 PAXIP1Q6ZW49 1069 aaPredicted RBP12.77□□□□□ -0.37
GRAMD2B-208ENST00000508523 CFAP44Q96MT7 982 aa12.75□□□□□ -0.37
GRAMD2B-208ENST00000508523 ADAM33Q9BZ11 813 aa12.75□□□□□ -0.37
GRAMD2B-208ENST00000508523 ZDHHC16Q969W1 377 aa12.74□□□□□ -0.37
GRAMD2B-208ENST00000508523 PCDHGA10Q9Y5H3 936 aa12.74□□□□□ -0.37
GRAMD2B-208ENST00000508523 DPYSL4O14531 572 aa12.72□□□□□ -0.37
GRAMD2B-208ENST00000508523 SLC4A5Q9BY07 1137 aa12.72□□□□□ -0.37
GRAMD2B-208ENST00000508523 VPS9D1Q9Y2B5 631 aa12.72□□□□□ -0.37
GRAMD2B-208ENST00000508523 PTPREP23469 700 aa12.7□□□□□ -0.38
GRAMD2B-208ENST00000508523 ZBED2Q9BTP6 218 aa12.69□□□□□ -0.38
GRAMD2B-208ENST00000508523 KCNH8Q96L42 1107 aa12.68□□□□□ -0.38
GRAMD2B-208ENST00000508523 PHF14O94880 888 aa12.67□□□□□ -0.38
GRAMD2B-208ENST00000508523 BHMG1C9JSJ3 638 aaPredicted RBP12.66□□□□□ -0.38
GRAMD2B-208ENST00000508523 PDIA6Q15084 440 aa12.63□□□□□ -0.39
GRAMD2B-208ENST00000508523 TYW1BQ6NUM6 668 aa12.63□□□□□ -0.39
GRAMD2B-208ENST00000508523 FBXW7Q969H0 707 aa12.62□□□□□ -0.39
GRAMD2B-208ENST00000508523 ARIH1Q9Y4X5 557 aaPredicted RBP12.62□□□□□ -0.39
GRAMD2B-208ENST00000508523 PPP1R3GB7ZBB8 358 aa12.61□□□□□ -0.39
GRAMD2B-208ENST00000508523 COL9A1P20849 921 aa12.61□□□□□ -0.39
GRAMD2B-208ENST00000508523 E2F4Q16254 413 aa12.6□□□□□ -0.39
GRAMD2B-208ENST00000508523 EPAS1Q99814 870 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms