RNA–Protein interactions for RNA: ENST00000508514.5

SKP2-204, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3 BASIC

Gene SKP2, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-204ENST00000508514 POGZQ7Z3K3 1410 aa29.4■■■□□ 2.3
SKP2-204ENST00000508514 EFCAB2Q5VUJ9 269 aa29.4■■■□□ 2.3
SKP2-204ENST00000508514 ILDR1Q86SU0 546 aaPredicted RBP29.4■■■□□ 2.3
SKP2-204ENST00000508514 MAGI2Q86UL8 1455 aa29.38■■■□□ 2.29
SKP2-204ENST00000508514 ZFYVE16Q7Z3T8 1539 aa29.38■■■□□ 2.29
SKP2-204ENST00000508514 CASKIN1Q8WXD9 1431 aa29.36■■■□□ 2.29
SKP2-204ENST00000508514 MYO5CQ9NQX4 1742 aa29.34■■■□□ 2.29
SKP2-204ENST00000508514 PCF11O94913 1555 aaKnown RBP29.32■■■□□ 2.28
SKP2-204ENST00000508514 CLIP1P30622 1438 aa29.3■■■□□ 2.28
SKP2-204ENST00000508514 AFAP1Q8N556 730 aa29.29■■■□□ 2.28
SKP2-204ENST00000508514 RIMS1Q86UR5 1692 aaKnown RBP29.28■■■□□ 2.28
SKP2-204ENST00000508514 ARHGAP5Q13017 1502 aa29.27■■■□□ 2.28
SKP2-204ENST00000508514 ATP10AO60312 1499 aa29.25■■■□□ 2.27
SKP2-204ENST00000508514 MLECQ14165 292 aa29.25■■■□□ 2.27
SKP2-204ENST00000508514 LMTK3Q96Q04 1460 aa29.24■■■□□ 2.27
SKP2-204ENST00000508514 CCDC18Q5T9S5 1454 aa29.23■■■□□ 2.27
SKP2-204ENST00000508514 CDC42BPBQ9Y5S2 1711 aa29.23■■■□□ 2.27
SKP2-204ENST00000508514 ZNF518AQ6AHZ1 1483 aa29.21■■■□□ 2.27
SKP2-204ENST00000508514 KDM5CP41229 1560 aa29.2■■■□□ 2.26
SKP2-204ENST00000508514 ARHGEF12Q9NZN5 1544 aa29.2■■■□□ 2.26
SKP2-204ENST00000508514 C9orf84Q5VXU9 1444 aa29.2■■■□□ 2.26
SKP2-204ENST00000508514 FYCO1Q9BQS8 1478 aa29.19■■■□□ 2.26
SKP2-204ENST00000508514 PLPPR3Q6T4P5 718 aa29.18■■■□□ 2.26
SKP2-204ENST00000508514 TRAPPC8Q9Y2L5 1435 aa29.16■■■□□ 2.26
SKP2-204ENST00000508514 PREX2Q70Z35 1606 aa29.15■■■□□ 2.26
SKP2-204ENST00000508514 ABCC1P33527 1531 aa29.11■■■□□ 2.25
SKP2-204ENST00000508514 HSPA2P54652 639 aa29.11■■■□□ 2.25
SKP2-204ENST00000508514 MLH3Q9UHC1 1453 aa29.1■■■□□ 2.25
SKP2-204ENST00000508514 DIP2CQ9Y2E4 1556 aa29.09■■■□□ 2.25
SKP2-204ENST00000508514 FER1L4A9Z1Z3 1794 aa29.09■■■□□ 2.25
SKP2-204ENST00000508514 CDC42BPAQ5VT25 1732 aa29.08■■■□□ 2.25
SKP2-204ENST00000508514 CEBPAP49715 358 aaPredicted RBP29.06■■■□□ 2.24
SKP2-204ENST00000508514 MYT1LQ9UL68 1186 aa29.06■■■□□ 2.24
SKP2-204ENST00000508514 ABCA6Q8N139 1617 aa29.05■■■□□ 2.24
SKP2-204ENST00000508514 GPATCH8Q9UKJ3 1502 aaKnown RBP29.05■■■□□ 2.24
SKP2-204ENST00000508514 ITSN2Q9NZM3 1697 aa29.03■■■□□ 2.24
SKP2-204ENST00000508514 REREQ9P2R6 1566 aa29.03■■■□□ 2.24
SKP2-204ENST00000508514 ZNF777Q9ULD5 760 aaPredicted RBP29.01■■■□□ 2.23
SKP2-204ENST00000508514 SAMD9LQ8IVG5 1584 aa29■■■□□ 2.23
SKP2-204ENST00000508514 KIDINS220Q9ULH0 1771 aa28.98■■■□□ 2.23
SKP2-204ENST00000508514 HNRNPMP52272 730 aaKnown RBP eCLIP28.97■■■□□ 2.23
SKP2-204ENST00000508514 AGLP35573 1532 aa28.96■■■□□ 2.23
SKP2-204ENST00000508514 SYCP2Q9BX26 1530 aa28.94■■■□□ 2.22
SKP2-204ENST00000508514 FBXO41Q8TF61 875 aa28.92■■■□□ 2.22
SKP2-204ENST00000508514 CFDP1Q9UEE9 299 aaPredicted RBP28.91■■■□□ 2.22
SKP2-204ENST00000508514 CEP162Q5TB80 1403 aa28.91■■■□□ 2.22
SKP2-204ENST00000508514 MTUS2Q5JR59 1369 aa28.9■■■□□ 2.22
SKP2-204ENST00000508514 CCNB3Q8WWL7 1395 aa28.89■■■□□ 2.22
SKP2-204ENST00000508514 KIAA1107Q9UPP5 1409 aa28.89■■■□□ 2.22
SKP2-204ENST00000508514 SPAG9O60271 1321 aaKnown RBP28.87■■■□□ 2.21
SKP2-204ENST00000508514 ZNF644Q9H582 1327 aaPredicted RBP28.87■■■□□ 2.21
SKP2-204ENST00000508514 PREX1Q8TCU6 1659 aa28.85■■■□□ 2.21
SKP2-204ENST00000508514 C3P01024 1663 aa28.82■■■□□ 2.2
SKP2-204ENST00000508514 TIAM1Q13009 1591 aa28.81■■■□□ 2.2
SKP2-204ENST00000508514 PLEKHH2Q8IVE3 1493 aa28.81■■■□□ 2.2
SKP2-204ENST00000508514 LOC105371045A0A1W2PR82 267 aa28.79■■■□□ 2.2
SKP2-204ENST00000508514 ATP7AQ04656 1500 aa28.79■■■□□ 2.2
SKP2-204ENST00000508514 EHBP1L1Q8N3D4 1523 aa28.78■■■□□ 2.2
SKP2-204ENST00000508514 MBD5Q9P267 1494 aa28.78■■■□□ 2.2
SKP2-204ENST00000508514 UHRF1BP1Q6BDS2 1440 aa28.77■■■□□ 2.2
SKP2-204ENST00000508514 INO80Q9ULG1 1556 aaPredicted RBP28.77■■■□□ 2.2
SKP2-204ENST00000508514 SETD1BQ9UPS6 1966 aaKnown RBP28.77■■■□□ 2.2
SKP2-204ENST00000508514 ESF1Q9H501 851 aaKnown RBP28.76■■■□□ 2.19
SKP2-204ENST00000508514 STRCQ7RTU9 1775 aa28.74■■■□□ 2.19
SKP2-204ENST00000508514 CNTLNQ9NXG0 1405 aa28.74■■■□□ 2.19
SKP2-204ENST00000508514 PLXNC1O60486 1568 aa28.74■■■□□ 2.19
SKP2-204ENST00000508514 A2MP01023 1474 aa28.73■■■□□ 2.19
SKP2-204ENST00000508514 SUPT6HQ7KZ85 1726 aaKnown RBP28.72■■■□□ 2.19
SKP2-204ENST00000508514 ZMYM3Q14202 1370 aa28.7■■■□□ 2.18
SKP2-204ENST00000508514 CERKQ8TCT0 537 aa28.69■■■□□ 2.18
SKP2-204ENST00000508514 NCOA2Q15596 1464 aa28.67■■■□□ 2.18
SKP2-204ENST00000508514 GGT6Q6P531 493 aa28.64■■■□□ 2.18
SKP2-204ENST00000508514 MROH2AA6NES4 1674 aa28.64■■■□□ 2.17
SKP2-204ENST00000508514 RTEL1-TNFRSF6BF6WH68 1400 aa28.62■■■□□ 2.17
SKP2-204ENST00000508514 NPATQ14207 1427 aa28.62■■■□□ 2.17
SKP2-204ENST00000508514 DMRT2Q9Y5R5 561 aa28.62■■■□□ 2.17
SKP2-204ENST00000508514 VPS8Q8N3P4 1428 aa28.6■■■□□ 2.17
SKP2-204ENST00000508514 CLTCQ00610 1675 aaKnown RBP28.59■■■□□ 2.17
SKP2-204ENST00000508514 CAMSAP2Q08AD1 1489 aa28.59■■■□□ 2.17
SKP2-204ENST00000508514 ADGBQ8N7X0 1667 aa28.58■■■□□ 2.17
SKP2-204ENST00000508514 DHX29Q7Z478 1369 aaKnown RBP28.58■■■□□ 2.17
SKP2-204ENST00000508514 PTPRTO14522 1441 aa28.57■■■□□ 2.16
SKP2-204ENST00000508514 PTPRKQ15262 1439 aa28.57■■■□□ 2.16
SKP2-204ENST00000508514 NCOA1Q15788 1441 aa28.56■■■□□ 2.16
SKP2-204ENST00000508514 LRRC9Q6ZRR7 1453 aa28.55■■■□□ 2.16
SKP2-204ENST00000508514 KANK4Q5T7N3 995 aaPredicted RBP28.55■■■□□ 2.16
SKP2-204ENST00000508514 PPP6R1Q9UPN7 881 aa28.55■■■□□ 2.16
SKP2-204ENST00000508514 CCDC141Q6ZP82 1450 aa28.54■■■□□ 2.16
SKP2-204ENST00000508514 RSPH4AQ5TD94 716 aa28.52■■■□□ 2.16
SKP2-204ENST00000508514 CAMSAP1Q5T5Y3 1602 aa28.49■■■□□ 2.15
SKP2-204ENST00000508514 KIF3BO15066 747 aa28.48■■■□□ 2.15
SKP2-204ENST00000508514 NCKAP5LQ9HCH0 1330 aa28.46■■■□□ 2.15
SKP2-204ENST00000508514 ARHGEF5Q12774 1597 aa28.45■■■□□ 2.15
SKP2-204ENST00000508514 MAP3K1Q13233 1512 aa28.44■■■□□ 2.14
SKP2-204ENST00000508514 MYO3AQ8NEV4 1616 aa28.44■■■□□ 2.14
SKP2-204ENST00000508514 LTBP4Q8N2S1 1624 aa28.43■■■□□ 2.14
SKP2-204ENST00000508514 FBXO31Q5XUX0 539 aaPredicted RBP28.42■■■□□ 2.14
SKP2-204ENST00000508514 CEP170BQ9Y4F5 1589 aaPredicted RBP28.41■■■□□ 2.14
SKP2-204ENST00000508514 ZNF142P52746 1687 aaPredicted RBP28.4■■■□□ 2.14
SKP2-204ENST00000508514 TSPY4P0CV99 314 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms